XLOC_043460 (gene) - C. hemisphaerica

Overview
NameXLOC_043460
Unique NameXLOC_043460
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_508:151375..159159-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043460 ID=XLOC_043460|Name=XLOC_043460|organism=Clytia hemisphaerica|type=gene|length=7785bp|location=Sequence derived from alignment at scaffold_508:151375..159159- (Clytia hemisphaerica)
TTTTAGGTTGCAGTGGTTCAGATGAAAGCTACCAATCAAGTTTTTGCTAT GAAAACATTGAATAAATGGGAAATGGTAAAAAGAGCTGAGGTATTCTGAT TTTCTTTTTGTTTCATTTACCTTAGTTGTTTCCCTTGGGGGCAAGTTACT CACAAGCAGCAAGGCTTAAAAGAAATTGTAATATTTACTTCTTATAGGCA AAACTGATTCTATACTTTTAGCTGTCTTCGTTTCAAAATAAGTAAAGACC CTGAGTTTTAAAGCACTTTGAATTTCAAAAATGTTTAAAAAGATGATTGG TGTGTGTATAATTCTTCAATATTTTGTGTTGAGTTTGCAGAATCATAAAT GTATATAAAATTGGTTTCTATTCTCTTTCATTAAAAGACGGCTTGCTACA GAGAAGAACGTGATATTCTTGTGTTTGGTGATAAAAGGTGGATAACAAAA CTACATTATGCATTTCAAGATTCTGGTAATTTGGTGAGTATGCTTTGGAG TTGCAAAATAGTGGTATAATTCTGTTTTTTATGCCCTAAACCTGAAATGA ACCCTTGATTAGAAATTACTCAAAGTGTGCAGAGGGGTCCAGCCCCCCAG CATTTTTCAGGGGGGGGGGGCTAAGGGAAATAAACCCCGGCTAAATTCTA GAAACATAGCCCCCATCTTCACAAAGCAAAATATCTAAGAAATTTTGCAT GCANCCAATCCATATATGCAATAAATTTGAGAAATAAAGTCAAGTTTTCA ATCGATTGCAAGAGCAGACATAATATTTGTGTGTAATGTACATCCCAGAA ACACAGTGAGTACCAGGCCGCTGGTCAAACATTTGATCATAATTTAACCT TTTTTAGGTTGCAGTGGTTCAGATGAAAGCTACCAATCAAGTTTTTGCTA TGAAAACATTGAATAAATGGGAAATGGTAAAAAGAGCTGAGGTATTCTGA TTTTCTTTTTGTTTCATTTACCTTAGTTGTTTCCCTTGGGGGCAAGTTAC TCACAAGCAGCAAGGCTTAAAAGAAATTGTAATATTTACTTCTTATAGGC AAAACTGATTCTATACTTTTAGCTGTCTTCGTTTCAAAATAAGTAAAGAC CCTGAGTTTTAAAGCACTTTGAATTTCAAAAATGTTTAAAAAGATGATTG GTGTGTGTATAATTCTTCAATATTTTGTGTTGAGTTTGCAGAATCATAAA TGTATATAAAATTGGTTTCTATTCTCTTTCATTAAAAGACGGCTTGTTAC AGAGAAGAACGTGATATTCTTGTGTTTGGTGATAAAAGGTGGATAACAAA ACTACATTATGCATTTCAAGATTCTGGTAATTTGGTGAGTATGCTTTGGA GTTGCAAAATAGTGGTATAATTCTGTTTTTTATGCCCTAAACCTGAAATG AACCCTTGATTAGAAATTACTCAAAGTGTGCAGAGGGGTCCAGCCCCCCA GCATTTTTCAGGGGGGGGGGGCTAAGGGAAATAAACCCCGGCTAAATTCT AGAAACATAGCCCCCATCTTCACAAAGCAAAATATCTAAGAAATTTTGCA TGCAAATTGGCGATAAATTCATTGCACCGCAGAAAAAGCTCTGCTCCCAG TTCTATTACACAACACTCAGCCTTCCCTAGCAAGCTAGCCCCCAGTATTT TTTGGAGAAATACAGCCCCCACTCAAACAAAAATGGTTTAGCCCCCCTCC CCAAGCTCAGGGGGGTGCATTCTATGGTACTGTGGTACCTAAAATAAGGT TCAGATTTTAAGACTTTTTACTAAACAATAGAAAAAATTCATCTAAAACT TAATTAGAATTCAAATTAAAATCTGTTAGCATGTTCATCCCTTTTCAATG ATTTTTAGAATATCCCTTTACTTTTTTCCTTATAGTACTTCGTCATGGAC TATTATAGTGGTGGAGATCTGTTAACATTGTTGAGTAAATATGAAGATCA TTTGCCTGAAAGCATGATGAAATTCTATGTGGCAGAGATTATTCTGGCGA TCAATTCAATACATGAAATGAATTATGTTCACAGGTACAGTTGAAATCTT TTTTTAAATTCCAGCCTTGATGAGCCATTCCAAGAAAACATCAACCAACA CCTCTATCAGTGGTGTTGGTTGCTTTGAACAAAATGACGTTTTATCTGAA CTAGACAGTTTTGTTGACTTTTGTAAAAAGAAAGAAGTCGACAATACCAT CATTACAGACATAAATGTTAAAACATTGGCATATATCAAAAAATGTAAAA AACAGAAGTCACCACGGCACCTTCAATTAACCAAACAGTATCTCAAACAA AATAATCTTTTGGCTATCCCATTTGATAAAGGCATCGGTATTTGCATCAT GAAATCATCAACGTACAACGAAAAATTAAATGCGATCGTGAACTTGCCAC AGTTTGAAAAGGTTTTGCCGAAAAGGAAAAATGAACGAAATCCTATCTTG AAAGAAGAAGACCGCGTCGTCAAGTGCCTGTCAGATCTTCACATAAAGAA TAAGATATCAGAGAAACTTTTCAAGAAACTAAAACCCATCGGTAGTCAAC CACCTCGCTTGTATGGCCTAGCGAAAGTCCATAAAAATGGTTTACCGGTC AGACCAGTACTTTCAATGCCTGGCTCAGCTTACTACAACATCGCAAAACA AACCGCCGAATGGCTTTCCGTTGTCAACGAATGCTGCATCAATACATCTT CGAAATCCATCTCCGATAAATTGGACGAAATTGTTTTGAAAGCTGACCAT GAACTTGTTAGTTTCGATATCGTATCTTTGTACACTAACGTTCCAGTTCT TGAAGCCATCGATGTTTGTGCTGATCTTTTATATTCTGGAGAATACAAAA AGCCTCCAGTTGATAAAGAAACTTTCATCGAACTGTTGAAAATTTGCAGT GAAAACGTAATAATGCTAACACACGATGGTCTTTACAGACAAAAGGATGG TTTGGCGATGGGCAGTCCCCCAGCACCAATGCTGGCAAACGGCTGGTTGA GTACGTATGATCCTATTATAAAGGAGGATGCTATGATTTATGAAAGATAC GTGGACGACATCTTACGTGACATTCATAAAGATAAGATCGATGACACTCT CGAGAAAATCAACACATTGAACCCAGAGTTTCTTAAATTCACCGTCGAAC ACGAATCTGACGATAAGATCGCGTTTCTTGACATGGAAATACACAGAACT GTTAACCGACTCCAGTCCACTTGGTTTACCAAGTCGACCGATACGGGTTT GATGATGAACTATCTTGCCCTTGCCCCAATGAAATACAAGAGATCAGTTG TTTGTGGTATGATTCACCGAATTTTCAGAGCTTGCAGNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN AGAGACGAATACAAAAGCCATGAATTGGTCATAAAACTATTTTGATTTTT TTTTTTTGTCACTTGAGAATTAGCTCTCATTTAATTAGGTTTTGTAGGTT GTTTTTTTCAATCAAATTTTTTCAATCAATTTTTTTTTTCTCTTTACAGT AGGTTATGTGTAGTTGTAGTGTGAGATGTATATGATGTTTTTACTCTAGA TTTTAATCTTGTTTTTNTATTATAGTGGTGGAGATCTGTTAACATTGTTG AGTAAATATGAAGATCATTTGCCTGAAAGCATGATGAAATTCTATGTGGC AGAGATTATTCTGGCGATCAATTCAATACATGAAATGAATTATGTTCACA GGTACAGTTGAAATCTTTTTTTAAATTCCAGCCTTGATGAGCCATTCCAA GAAAACATCAACTAACACCTCTATCAGTGGGGGGCAATCGCTTTGTGCAA ATGCGTGAATGGGCTTTGGCATTTGCGTGAAAAATTAGTGTGACTAAGTG AATAAGGTCAGCTGGGACTCATCAGTGCTATCAAATGATGCATGGGTCCT ACCTACTGATATCCAGTCAAAAAAGTGTGATACAATGTACCAGAATGTAC CCCTTATTTAAAAATGCTAATTTTGTGATAATTTCAGAGATATCAAGCCA GACAATGTGTTAATAGATGTGAATGGTCACATAAAGTTGGCAGATTTTGG ATCTTGTTTGCAGATTGGACCTGACGGTTATGTAAGTAAGGCTTTTACTG ATACTAAAGCTTCTTTGTAAAGATTACCTACTATAAAACTCCACCTTGAA ATTGGGATTTAAGTTTAAGTTTTAAAAATTATTTTCCAAGAGACCAGACC CCATTACTCGATAAATTCGTTAATCAAACAACTCAAACTTACTCAAACTT ACTCTCGAACCTACTTGAACAAGTAAAGTCCGAGTAATTCCTTTACTTGA ACTTTTGGAAATTTTCAAAAATTGGTGAGGAGTTCCAAAAGTTTGAGAAA TTCAATTGAAGAAAAGTTCGATAAGTTTGATTAGTTTTACGAGCCTCACC GGTAAAATTTAGGAGCAAAAAGAAATTAAATCTTCCTATTTTATCAGATG GTATGCTATGGTTGAACTAGAATTGGCAGATTTTCAATTTTCAACTTTAT TCGAACTTCACTCAAAACTTTTAATATACCTAATTACTGGAACTTATATT TTTGAAAAATTTTGAGGAGTTTGAGTAATTTGTTTACTCGAAGTTAACTT GTTTGAGTAAGTTTGAATAAGTTCGGAGTAAAAAAGTGGTTTGGGATCGA GTAATGGGGTCTGGAAGAGAATATTTGAAACATGTCTCTAATGTTTTTCA TTAGAATGTTATGTTAATCAGAACTTTTTTACATTTTTAAACAGGTCAAA TGTTCAGTTGCAGTTGGAACACCAGATTACATTAGTCCTGAAATTTTACA GGTAAGTTCTTTTGGAGGATTAGAGGGTTATGTTGTGTTGAACAAAACAG CCTAACGCTTGATTTCCTAAAAATTAAAATAATTGGTGTGATTTTTCAAC CTTTTTACAAAAGTCTTGAAAAAATTAGAGAGTTAAAATTGGATGGGAAT AAAAAGATCTGTCTAATTTTTCAACAGGCAATGGAAGATGGTAAAGGTCA ATATGGAAAAGAATGCGATTGGTGGTCACTGGGTATTTGTTGTTATGAAA TGATATATGGGGAAACACCATTCTACGCTGAATCGCTCATTGAAACCTAT GGACAAATCATGGATCATAAGGTATTTTATAGAAACTGATGAAAGGGATC TTTTTTTCAACTCTTCTTTTAACTCAGCAAACGGCCAACATGACAAAGTA CAAATTATGTTTGAGAGTTTAAAATTCTCTCTCTTTTAAAAAGGAAAGAC TCGATTTTACTTTTTAACACTTTTTATTCAGAGTAAATTCAAATTTCCAG ACGATTATGAAGTATCAGATAGTTGCAAGAACCTTTTATCCAGGTAATCC GTACTCAGATTCTATCATTCCTTGAGGCTCAAGTTTCCTATATATAACCA TGTAAAATAGTTACATAACCACCCTCCCATAGTGGAGTGAAATGAAGTAT TTTTTTTAAAAGATTTTTGCCTTGTGGAGGTACCAGAATGATATTGATAT TAGTCTCTTCTAATTAATCTCTCCTAATTGCATTTCGCGGGTTTCAATTT TCGCGGTTTTGCCCTTATTTGGACAAATTTCTTTCACTTTCCTAGGGGTT TTGCAATTCTTTTGATAGAATTGGAAAAAATTGTATTTCGCAGGTTCAAA TTTTTGTGGCTTTGCCAAATAACCGCGAAAAACACTAAAATCAATTCACG TGAAAATTAGTTCCAATAAGGTAAATAATGATTTTAATGATTTACATGCA TTAATATTGCTCTAAATAATTTCAGTTTGGTTTGTGATGCTGATAAGAGG CTTGGTAAAAGAGGACTTCACGATTTCAAGCAACATTCGTTTTTCAATGG AATCGATTGGAATAATATTTTAGATAGTAAGTAAAACCGATATGATACTG CTAGCTGAGTACATATTTTTTTGGAAAAATGGATACACGTGTAGCTTCTG GCTTTTCCATGGACTGGACTGCACTGACAAGTGGCCTAATGTAATATGGC AGACTCCATTTTTCGGCTTTGTTTGAGCATGCAATCCATTCCACTAGATA CAATCATTTTATTGAAGAAAAACAAACAGAAAATCATGACCAAGTGATAA TTTATAAAACTTATTGTAGCTCTTTAAATCTCAAAGGGGTTTTTGAAATA AATTTCGTTTTGTTGTTTTTATGGAATTTTTAACAACTAAAGTGAACACT TTTAAGATGCAAAATCCTCTAGTCTCCTCACTGGTCTCTTAGAGCCATAG AAAACATCAGAAATCAAAGTTCAGTCAAAAATAAACTATATTTCTACTAC ATTTGGATCAATTGAATTGAATTTTTAATTCTTACCGTAGAATCAAATTT TTGTAACTACTAGTCGCTTGTTATTCGACAGGCCTTGACTGGTATGTTTA GTCTTTTTGCTACTTTAACGTTTGCCATTGCATGCCCTTTTTTGAGAGAT TAAATAAGAAATCTAACATTATTTTAGTGAAGTAAAAACTACAAAAAATA AATTTGAATCTTCAAAAAATTATATTTAACCTACCTTACCAAATACTTTC TGTACAACCCTATTCAAATAGTCCATTGCAAGTCTTTTTCTCTTGTTCAT GTCAAATTTCATGTTGCCAAACGCTCTGCAAATAATCTTAAAGCTCTTCA TGAATCCTGACAAGATGTAAGATTGTTATTTTCCTGTTGAGAAGATCTCC CTTAGATAAGACAAGGTCAATCACTTTATTTTTTTGAGACGTATATTTAA TTGATTTCCCTGTTACCTGCATGCTATTATCATAAGGAATAGGTAGATCT GTATCATTATCAATTTGTTTTGAGAAAATCTTTAAAATACATTTCAGTGA GTGTAGATAATTCAATAGCGACTGTCTTTTGCAGAGCGTCTTTTATTGAC GTGCCAGAAAAACTGTGACAAAATTTGCTGCACTGGTATTGACGCTTCTT GCTTGTCAGCTGATGGTTATCTTTTTCTACTTTTCTCTTTCTCAGTAACG CCGCCTTACGTGCCCGAACTGGATGGTCCAACCGACGTTTCAAATTTTGA TATTGACGATCTGATGGAAGCAAAAACACAGGTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069801TCONS_00069801Clytia hemisphaericatranscript
TCONS_00069800TCONS_00069800Clytia hemisphaericatranscript
TCONS_00069799TCONS_00069799Clytia hemisphaericatranscript
TCONS_00069798TCONS_00069798Clytia hemisphaericatranscript
TCONS_00069797TCONS_00069797Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069799-proteinTCONS_00069799-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_508supercontigscaffold_508:151375..159159 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.85 3.81 2.63 2.4 69.29 49.21 46.02 53.03 19.35 27.01 19.2 13.79 21.42 18.67 17.09 21.55 20.05 22.76 15.94 21.08 21.18 24.8 10.2 17.17 28.15 31.32 18.68 13.67 20.97 23.76