TCONS_00069801 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069801
Unique NameTCONS_00069801
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length883

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069801 ID=TCONS_00069801|Name=TCONS_00069801|organism=Clytia hemisphaerica|type=transcript|length=883bp
TTTTAGGTTGCAGTGGTTCAGATGAAAGCTACCAATCAAGTTTTTGCTAT
GAAAACATTGAATAAATGGGAAATGGTAAAAAGAGCTGAGACGGCTTGCT
ACAGAGAAGAACGTGATATTCTTGTGTTTGGTGATAAAAGGTGGATAACA
AAACTACATTATGCATTTCAAGATTCTGGTAATTTGTACTTCGTCATGGA
CTATTATAGTGGTGGAGATCTGTTAACATTGTTGAGTAAATATGAAGATC
ATTTGCCTGAAAGCATGATGAAATTCTATGTGGCAGAGATTATTCTGGCG
ATCAATTCAATACATGAAATGAATTATGTTCACAGAGATATCAAGCCAGA
CAATGTGTTAATAGATGTGAATGGTCACATAAAGTTGGCAGATTTTGGAT
CTTGTTTGCAGATTGGACCTGACGGTTATGTCAAATGTTCAGTTGCAGTT
GGAACACCAGATTACATTAGTCCTGAAATTTTACAGGCAATGGAAGATGG
TAAAGGTCAATATGGAAAAGAATGCGATTGGTGGTCACTGGGTATTTGTT
GTTATGAAATGATATATGGGGAAACACCATTCTACGCTGAATCGCTCATT
GAAACCTATGGACAAATCATGGATCATAAGAgtaaattcaaatttccaga
CGATTATGAAGTATCAGATAGTTGCAAGAACCTTTTATCCAGTTTGGTTT
GTGATGCTGATAAGAGGCTTGGTAAAAGAGGACTTCACGATTTCAAGCAA
CATTCGTTTTTCAATGGAATCGATTGGAATAATATTTTAGATATAACGCC
GCCTTACGTGCCCGAACTGGATGGTCCAACCgacgtttcaaattttgata
ttgacGATCTGATGGAAGCAAAAACACAGGTAT
Run BLAST on NCBI

transcript from alignment at scaffold_508:151375..159159-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069801 ID=TCONS_00069801|Name=TCONS_00069801|organism=Clytia hemisphaerica|type=transcript|length=7785bp|location=Sequence derived from alignment at scaffold_508:151375..159159- (Clytia hemisphaerica)
TTTTAGGTTGCAGTGGTTCAGATGAAAGCTACCAATCAAGTTTTTGCTAT
GAAAACATTGAATAAATGGGAAATGGTAAAAAGAGCTGAGGTATTCTGAT
TTTCTTTTTGTTTCATTTACCTTAGTTGTTTCCCTTGGGGGCAAGTTACT
CACAAGCAGCAAGGCTTAAAAGAAATTGTAATATTTACTTCTTATAGGCA
AAACTGATTCTATACTTTTAGCTGTCTTCGTTTCAAAATAAGTAAAGACC
CTGAGTTTTAAAGCACTTTGAATTTCAAAAATGTTTAAAAAGATGATTGG
TGTGTGTATAATTCTTCAATATTTTGTGTTGAGTTTGCAGAATCATAAAT
GTATATAAAATTGGTTTCTATTCTCTTTCATTAAAAGACGGCTTGCTACA
GAGAAGAACGTGATATTCTTGTGTTTGGTGATAAAAGGTGGATAACAAAA
CTACATTATGCATTTCAAGATTCTGGTAATTTGGTGAGTATGCTTTGGAG
TTGCAAAATAGTGGTATAATTCTGTTTTTTATGCCCTAAACCTGAAATGA
ACCCTTGATTAGAAATTACTCAAAGTGTGCAGAGGGGTCCAGCCCCCCAG
CATTTTTCAGGGGGGGGGGGCTAAGGGAAATAAACCCCGGCTAAATTCTA
GAAACATAGCCCCCATCTTCACAAAGCAAAATATCTAAGAAATTTTGCAT
GCANCCAATCCATATATGCAATAAATTTGAGAAATAAAGTCAAGTTTTCA
ATCGATTGCAAGAGCAGACATAATATTTGTGTGTAATGTACATCCCAGAA
ACACAGTGAGTACCAGGCCGCTGGTCAAACATTTGATCATAATTTAACCT
TTTTTAGGTTGCAGTGGTTCAGATGAAAGCTACCAATCAAGTTTTTGCTA
TGAAAACATTGAATAAATGGGAAATGGTAAAAAGAGCTGAGGTATTCTGA
TTTTCTTTTTGTTTCATTTACCTTAGTTGTTTCCCTTGGGGGCAAGTTAC
TCACAAGCAGCAAGGCTTAAAAGAAATTGTAATATTTACTTCTTATAGGC
AAAACTGATTCTATACTTTTAGCTGTCTTCGTTTCAAAATAAGTAAAGAC
CCTGAGTTTTAAAGCACTTTGAATTTCAAAAATGTTTAAAAAGATGATTG
GTGTGTGTATAATTCTTCAATATTTTGTGTTGAGTTTGCAGAATCATAAA
TGTATATAAAATTGGTTTCTATTCTCTTTCATTAAAAGACGGCTTGTTAC
AGAGAAGAACGTGATATTCTTGTGTTTGGTGATAAAAGGTGGATAACAAA
ACTACATTATGCATTTCAAGATTCTGGTAATTTGGTGAGTATGCTTTGGA
GTTGCAAAATAGTGGTATAATTCTGTTTTTTATGCCCTAAACCTGAAATG
AACCCTTGATTAGAAATTACTCAAAGTGTGCAGAGGGGTCCAGCCCCCCA
GCATTTTTCAGGGGGGGGGGGCTAAGGGAAATAAACCCCGGCTAAATTCT
AGAAACATAGCCCCCATCTTCACAAAGCAAAATATCTAAGAAATTTTGCA
TGCAAATTGGCGATAAATTCATTGCACCGCAGAAAAAGCTCTGCTCCCAG
TTCTATTACACAACACTCAGCCTTCCCTAGCAAGCTAGCCCCCAGTATTT
TTTGGAGAAATACAGCCCCCACTCAAACAAAAATGGTTTAGCCCCCCTCC
CCAAGCTCAGGGGGGTGCATTCTATGGTACTGTGGTACCTAAAATAAGGT
TCAGATTTTAAGACTTTTTACTAAACAATAGAAAAAATTCATCTAAAACT
TAATTAGAATTCAAATTAAAATCTGTTAGCATGTTCATCCCTTTTCAATG
ATTTTTAGAATATCCCTTTACTTTTTTCCTTATAGTACTTCGTCATGGAC
TATTATAGTGGTGGAGATCTGTTAACATTGTTGAGTAAATATGAAGATCA
TTTGCCTGAAAGCATGATGAAATTCTATGTGGCAGAGATTATTCTGGCGA
TCAATTCAATACATGAAATGAATTATGTTCACAGGTACAGTTGAAATCTT
TTTTTAAATTCCAGCCTTGATGAGCCATTCCAAGAAAACATCAACCAACA
CCTCTATCAGTGGTGTTGGTTGCTTTGAACAAAATGACGTTTTATCTGAA
CTAGACAGTTTTGTTGACTTTTGTAAAAAGAAAGAAGTCGACAATACCAT
CATTACAGACATAAATGTTAAAACATTGGCATATATCAAAAAATGTAAAA
AACAGAAGTCACCACGGCACCTTCAATTAACCAAACAGTATCTCAAACAA
AATAATCTTTTGGCTATCCCATTTGATAAAGGCATCGGTATTTGCATCAT
GAAATCATCAACGTACAACGAAAAATTAAATGCGATCGTGAACTTGCCAC
AGTTTGAAAAGGTTTTGCCGAAAAGGAAAAATGAACGAAATCCTATCTTG
AAAGAAGAAGACCGCGTCGTCAAGTGCCTGTCAGATCTTCACATAAAGAA
TAAGATATCAGAGAAACTTTTCAAGAAACTAAAACCCATCGGTAGTCAAC
CACCTCGCTTGTATGGCCTAGCGAAAGTCCATAAAAATGGTTTACCGGTC
AGACCAGTACTTTCAATGCCTGGCTCAGCTTACTACAACATCGCAAAACA
AACCGCCGAATGGCTTTCCGTTGTCAACGAATGCTGCATCAATACATCTT
CGAAATCCATCTCCGATAAATTGGACGAAATTGTTTTGAAAGCTGACCAT
GAACTTGTTAGTTTCGATATCGTATCTTTGTACACTAACGTTCCAGTTCT
TGAAGCCATCGATGTTTGTGCTGATCTTTTATATTCTGGAGAATACAAAA
AGCCTCCAGTTGATAAAGAAACTTTCATCGAACTGTTGAAAATTTGCAGT
GAAAACGTAATAATGCTAACACACGATGGTCTTTACAGACAAAAGGATGG
TTTGGCGATGGGCAGTCCCCCAGCACCAATGCTGGCAAACGGCTGGTTGA
GTACGTATGATCCTATTATAAAGGAGGATGCTATGATTTATGAAAGATAC
GTGGACGACATCTTACGTGACATTCATAAAGATAAGATCGATGACACTCT
CGAGAAAATCAACACATTGAACCCAGAGTTTCTTAAATTCACCGTCGAAC
ACGAATCTGACGATAAGATCGCGTTTCTTGACATGGAAATACACAGAACT
GTTAACCGACTCCAGTCCACTTGGTTTACCAAGTCGACCGATACGGGTTT
GATGATGAACTATCTTGCCCTTGCCCCAATGAAATACAAGAGATCAGTTG
TTTGTGGTATGATTCACCGAATTTTCAGAGCTTGCAGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGAGACGAATACAAAAGCCATGAATTGGTCATAAAACTATTTTGATTTTT
TTTTTTTGTCACTTGAGAATTAGCTCTCATTTAATTAGGTTTTGTAGGTT
GTTTTTTTCAATCAAATTTTTTCAATCAATTTTTTTTTTCTCTTTACAGT
AGGTTATGTGTAGTTGTAGTGTGAGATGTATATGATGTTTTTACTCTAGA
TTTTAATCTTGTTTTTNTATTATAGTGGTGGAGATCTGTTAACATTGTTG
AGTAAATATGAAGATCATTTGCCTGAAAGCATGATGAAATTCTATGTGGC
AGAGATTATTCTGGCGATCAATTCAATACATGAAATGAATTATGTTCACA
GGTACAGTTGAAATCTTTTTTTAAATTCCAGCCTTGATGAGCCATTCCAA
GAAAACATCAACTAACACCTCTATCAGTGGGGGGCAATCGCTTTGTGCAA
ATGCGTGAATGGGCTTTGGCATTTGCGTGAAAAATTAGTGTGACTAAGTG
AATAAGGTCAGCTGGGACTCATCAGTGCTATCAAATGATGCATGGGTCCT
ACCTACTGATATCCAGTCAAAAAAGTGTGATACAATGTACCAGAATGTAC
CCCTTATTTAAAAATGCTAATTTTGTGATAATTTCAGAGATATCAAGCCA
GACAATGTGTTAATAGATGTGAATGGTCACATAAAGTTGGCAGATTTTGG
ATCTTGTTTGCAGATTGGACCTGACGGTTATGTAAGTAAGGCTTTTACTG
ATACTAAAGCTTCTTTGTAAAGATTACCTACTATAAAACTCCACCTTGAA
ATTGGGATTTAAGTTTAAGTTTTAAAAATTATTTTCCAAGAGACCAGACC
CCATTACTCGATAAATTCGTTAATCAAACAACTCAAACTTACTCAAACTT
ACTCTCGAACCTACTTGAACAAGTAAAGTCCGAGTAATTCCTTTACTTGA
ACTTTTGGAAATTTTCAAAAATTGGTGAGGAGTTCCAAAAGTTTGAGAAA
TTCAATTGAAGAAAAGTTCGATAAGTTTGATTAGTTTTACGAGCCTCACC
GGTAAAATTTAGGAGCAAAAAGAAATTAAATCTTCCTATTTTATCAGATG
GTATGCTATGGTTGAACTAGAATTGGCAGATTTTCAATTTTCAACTTTAT
TCGAACTTCACTCAAAACTTTTAATATACCTAATTACTGGAACTTATATT
TTTGAAAAATTTTGAGGAGTTTGAGTAATTTGTTTACTCGAAGTTAACTT
GTTTGAGTAAGTTTGAATAAGTTCGGAGTAAAAAAGTGGTTTGGGATCGA
GTAATGGGGTCTGGAAGAGAATATTTGAAACATGTCTCTAATGTTTTTCA
TTAGAATGTTATGTTAATCAGAACTTTTTTACATTTTTAAACAGGTCAAA
TGTTCAGTTGCAGTTGGAACACCAGATTACATTAGTCCTGAAATTTTACA
GGTAAGTTCTTTTGGAGGATTAGAGGGTTATGTTGTGTTGAACAAAACAG
CCTAACGCTTGATTTCCTAAAAATTAAAATAATTGGTGTGATTTTTCAAC
CTTTTTACAAAAGTCTTGAAAAAATTAGAGAGTTAAAATTGGATGGGAAT
AAAAAGATCTGTCTAATTTTTCAACAGGCAATGGAAGATGGTAAAGGTCA
ATATGGAAAAGAATGCGATTGGTGGTCACTGGGTATTTGTTGTTATGAAA
TGATATATGGGGAAACACCATTCTACGCTGAATCGCTCATTGAAACCTAT
GGACAAATCATGGATCATAAGGTATTTTATAGAAACTGATGAAAGGGATC
TTTTTTTCAACTCTTCTTTTAACTCAGCAAACGGCCAACATGACAAAGTA
CAAATTATGTTTGAGAGTTTAAAATTCTCTCTCTTTTAAAAAGGAAAGAC
TCGATTTTACTTTTTAACACTTTTTATTCAGAGTAAATTCAAATTTCCAG
ACGATTATGAAGTATCAGATAGTTGCAAGAACCTTTTATCCAGGTAATCC
GTACTCAGATTCTATCATTCCTTGAGGCTCAAGTTTCCTATATATAACCA
TGTAAAATAGTTACATAACCACCCTCCCATAGTGGAGTGAAATGAAGTAT
TTTTTTTAAAAGATTTTTGCCTTGTGGAGGTACCAGAATGATATTGATAT
TAGTCTCTTCTAATTAATCTCTCCTAATTGCATTTCGCGGGTTTCAATTT
TCGCGGTTTTGCCCTTATTTGGACAAATTTCTTTCACTTTCCTAGGGGTT
TTGCAATTCTTTTGATAGAATTGGAAAAAATTGTATTTCGCAGGTTCAAA
TTTTTGTGGCTTTGCCAAATAACCGCGAAAAACACTAAAATCAATTCACG
TGAAAATTAGTTCCAATAAGGTAAATAATGATTTTAATGATTTACATGCA
TTAATATTGCTCTAAATAATTTCAGTTTGGTTTGTGATGCTGATAAGAGG
CTTGGTAAAAGAGGACTTCACGATTTCAAGCAACATTCGTTTTTCAATGG
AATCGATTGGAATAATATTTTAGATAGTAAGTAAAACCGATATGATACTG
CTAGCTGAGTACATATTTTTTTGGAAAAATGGATACACGTGTAGCTTCTG
GCTTTTCCATGGACTGGACTGCACTGACAAGTGGCCTAATGTAATATGGC
AGACTCCATTTTTCGGCTTTGTTTGAGCATGCAATCCATTCCACTAGATA
CAATCATTTTATTGAAGAAAAACAAACAGAAAATCATGACCAAGTGATAA
TTTATAAAACTTATTGTAGCTCTTTAAATCTCAAAGGGGTTTTTGAAATA
AATTTCGTTTTGTTGTTTTTATGGAATTTTTAACAACTAAAGTGAACACT
TTTAAGATGCAAAATCCTCTAGTCTCCTCACTGGTCTCTTAGAGCCATAG
AAAACATCAGAAATCAAAGTTCAGTCAAAAATAAACTATATTTCTACTAC
ATTTGGATCAATTGAATTGAATTTTTAATTCTTACCGTAGAATCAAATTT
TTGTAACTACTAGTCGCTTGTTATTCGACAGGCCTTGACTGGTATGTTTA
GTCTTTTTGCTACTTTAACGTTTGCCATTGCATGCCCTTTTTTGAGAGAT
TAAATAAGAAATCTAACATTATTTTAGTGAAGTAAAAACTACAAAAAATA
AATTTGAATCTTCAAAAAATTATATTTAACCTACCTTACCAAATACTTTC
TGTACAACCCTATTCAAATAGTCCATTGCAAGTCTTTTTCTCTTGTTCAT
GTCAAATTTCATGTTGCCAAACGCTCTGCAAATAATCTTAAAGCTCTTCA
TGAATCCTGACAAGATGTAAGATTGTTATTTTCCTGTTGAGAAGATCTCC
CTTAGATAAGACAAGGTCAATCACTTTATTTTTTTGAGACGTATATTTAA
TTGATTTCCCTGTTACCTGCATGCTATTATCATAAGGAATAGGTAGATCT
GTATCATTATCAATTTGTTTTGAGAAAATCTTTAAAATACATTTCAGTGA
GTGTAGATAATTCAATAGCGACTGTCTTTTGCAGAGCGTCTTTTATTGAC
GTGCCAGAAAAACTGTGACAAAATTTGCTGCACTGGTATTGACGCTTCTT
GCTTGTCAGCTGATGGTTATCTTTTTCTACTTTTCTCTTTCTCAGTAACG
CCGCCTTACGTGCCCGAACTGGATGGTCCAACCGACGTTTCAAATTTTGA
TATTGACGATCTGATGGAAGCAAAAACACAGGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043460XLOC_043460Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069801-exon-scaffold_508-1575043694:159070..159159TCONS_00069801-exon-scaffold_508-1575043694:159070..159159Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1575043694:158677..158772TCONS_00069801-exon-scaffold_508-1575043694:158677..158772Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1575043694:157126..157274TCONS_00069801-exon-scaffold_508-1575043694:157126..157274Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1575043694:154379..154472TCONS_00069801-exon-scaffold_508-1575043694:154379..154472Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1575043694:153659..153715TCONS_00069801-exon-scaffold_508-1575043694:153659..153715Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1575043694:153339..153482TCONS_00069801-exon-scaffold_508-1575043694:153339..153482Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1575043694:153117..153178TCONS_00069801-exon-scaffold_508-1575043694:153117..153178Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1575043694:152584..152684TCONS_00069801-exon-scaffold_508-1575043694:152584..152684Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1575043694:151375..151464TCONS_00069801-exon-scaffold_508-1575043694:151375..151464Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1510915933:159070..159159TCONS_00069801-exon-scaffold_508-1510915933:159070..159159Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1510915933:158677..158772TCONS_00069801-exon-scaffold_508-1510915933:158677..158772Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1510915933:157126..157274TCONS_00069801-exon-scaffold_508-1510915933:157126..157274Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1510915933:154379..154472TCONS_00069801-exon-scaffold_508-1510915933:154379..154472Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1510915933:153659..153715TCONS_00069801-exon-scaffold_508-1510915933:153659..153715Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1510915933:153339..153482TCONS_00069801-exon-scaffold_508-1510915933:153339..153482Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1510915933:153117..153178TCONS_00069801-exon-scaffold_508-1510915933:153117..153178Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1510915933:152584..152684TCONS_00069801-exon-scaffold_508-1510915933:152584..152684Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1510915933:151375..151464TCONS_00069801-exon-scaffold_508-1510915933:151375..151464Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1491911889:159070..159159TCONS_00069801-exon-scaffold_508-1491911889:159070..159159Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1491911889:158677..158772TCONS_00069801-exon-scaffold_508-1491911889:158677..158772Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1491911889:157126..157274TCONS_00069801-exon-scaffold_508-1491911889:157126..157274Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1491911889:154379..154472TCONS_00069801-exon-scaffold_508-1491911889:154379..154472Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1491911889:153659..153715TCONS_00069801-exon-scaffold_508-1491911889:153659..153715Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1491911889:153339..153482TCONS_00069801-exon-scaffold_508-1491911889:153339..153482Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1491911889:153117..153178TCONS_00069801-exon-scaffold_508-1491911889:153117..153178Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1491911889:152584..152684TCONS_00069801-exon-scaffold_508-1491911889:152584..152684Clytia hemisphaericaexon
TCONS_00069801-exon-scaffold_508-1491911889:151375..151464TCONS_00069801-exon-scaffold_508-1491911889:151375..151464Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_508supercontigscaffold_508:151375..159159 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0260089	0.029274	0.0147799	0.0196012	65.7071	44.0706	45.6607	52.8191	0.0767112	16.7051	0.188974	10.1388	0.118943	0.0540647	9.56597	0.103559	0.133353	22.7605	0.135382	20.8723	0.113876	0.186107	10.1216	0.0748215	26.4348	16.1977	0.105264	0.0978953	20.7625	0.25021
Blast
[Close]
BLAST of TCONS_00069801 vs. Swiss-Prot (Human)
Match: MRCKA (Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens GN=CDC42BPA PE=1 SV=1)

HSP 1 Score: 450.284 bits (1157), Expect = 2.921e-145
Identity = 195/285 (68.42%), Postives = 245/285 (85.96%), Query Frame = 1 
Query:    7 VAVVQMKATNQVFAMKTLNKWEMVKRAETACYREERDILVFGDKRWITKLHYAFQDSGNLYFVMDYYSGGDLLTLLSKYEDHLPESMMKFYVAEIILAINSIHEMNYVHRDIKPDNVLIDVNGHIKLADFGSCLQIGPDGYVKCSVAVGTPDYISPEILQAMEDGKGQYGKECDWWSLGICCYEMIYGETPFYAESLIETYGQIMDHKSKFKFPDDY-EVSDSCKNLLSSLVCDADKRLGKRGLHDFKQHSFFNGIDWNNILDITPPYVPELDGPTDVSNFDIDD 858
            VAVV++K  ++VFAMK LNKWEM+KRAETAC+REERD+LV GD +WIT LHYAFQD  NLY VMDYY GGDLLTLLSK+ED LPE M +FY+AE+++AI+S+H+++YVHRDIKPDN+L+D+NGHI+LADFGSCL++  DG V+ SVAVGTPDYISPEILQAMEDGKG+YG ECDWWSLG+C YEM+YGETPFYAESL+ETYG+IM+HK +F+FP    +VS++ K+L+  L+C  + RLG+ G+ DFK+H FF+GIDW+NI +   PY+PE+  PTD SNFD+DD
Sbjct:   91 VAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDD 375
The following BLAST results are available for this feature:
BLAST of TCONS_00069801 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRCKA2.921e-14568.42Serine/threonine-protein kinase MRCK alpha OS=Homo... [more]
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