XLOC_042207 (gene) - C. hemisphaerica

Overview
NameXLOC_042207
Unique NameXLOC_042207
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_471:85205..95013-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042207 ID=XLOC_042207|Name=XLOC_042207|organism=Clytia hemisphaerica|type=gene|length=9809bp|location=Sequence derived from alignment at scaffold_471:85205..95013- (Clytia hemisphaerica)
CGTTTGGCTTGCACATATATATTTTCTGTCGTGTTAGATAGAATAACAAG ACAAGGTCTAAACACTCTCTATGTTTGAGCTTATAAACTAAAACGTGTGT GTTATGTATTTAAACATACAAATCAAAACACACACATGAAAGAGGATATC AAATAGTTTTAAAGTTGTGACCAGTGGTAAAGACATAACATTCTTTTCTC TTATACTATAAAGTAAATGAACTTTGGAGTAAAAATATCAATTTATCCTG GAAGCGAAGGAGGTAGTGGAAGGAAGCAAAATGGCGTTTGTGGAAAGTAT TGTTAACGCTCCGATGGAAGCATGTAAAAGGTATTTTATTTTTTTATTTC CCTTTGCCAACTTTCTAGCAGAACAAATGATTAATTCAAAACACCAGGGG GGAGGGAGGTGACACCCGGGAGACAAGTAACGTTTAAGGAGCCCTTCTAT TGACTGAAACTTGACGATATATTGATTAGTCTGAATCACAGACCTCTATA GATATACTTCCTATATAGAAATCTATAAGAAACTTTTTTCGCTAGACGAT GAGCAGAAGCCTATATATTGATGGATAACTAAAACAAAAGTGTTCGCAAA GCAACTTGTTTAGAATTTTGCTAACATATGAAGTAGGTAAAGGTAGTGTG CTTCGTCTTCTAAATCTAAAAATGTTTAAAGGGTGAAATGTACCTGAAGG TAGAACAGTTCCTTTTTTTCGAAACGTCATTGGGCTTCTCCAGAAAAAAA CCGTACTGTTGAGGAGCTCCAACCTTTTGTGAATTACCCCCTTGGAATTC CAGGCAATTTTAGGATCATACCCCTCTGGAATTCTGAATTTTTACAGATT TTCATTCATTACCCCCATGGAATTCCACTTATTTTTGACGGATTTTTGTC TACTGCTACTGTATGGAATTCCACTGCATTTCAAACCATACCCCCTTGGA ATATAAATGGACTCTTCAACAGGGGGTGAACGGTTTTTTTCGAAACGTCA TTATCGTGTAAGGGTAATATGTTTATTTTCAAATGCACTATCTACAAATC GGGCGCCGAAATATATTGGCAATATTTTAACGTTTTTCAGAATTGAAAGC TCGGGCGAGAATTGCAGTTTCATTACTTCCGCTTGGTTTCATTGGATTGT TCGATTTGGGAGGGTTTAAGTGGCTTCCAGGCTATATTCTCAACCTTATT GGAATATTTTTGAGCTTTTAGATCCTGAGATNGGCTATATTCTCAACCTT ATTGGAATATTTTTGAACTTTTAGATCCTGAGATCCTAAGGTCCTAAGCG TTAAGTCTAAAGTTATAACTCAAAGTTAAAACTCTACTTTCAAACCGTAC TTCAAAGCACTTGAAAATCACTTGCGTTGCATGAACACATAAATGTTAAA ATTTACGTGATTTGATCGGGGTTTCGAGTGAATTTGAGAAATCTGTGAGA TTAAGAGATTTGTGGAAATAGTTTTGTTGTTGTCTAGACAATCTACTTTG TCCGGGCATCTATTACACAATCCAGCCTGATTACGACAATCTCACGTGTA TAAGCTACCTATCGATAATCTAAGTCTCTGTCTATAATGTGTTATTTAGT TCCTATGCCGACCTTTCACCCTGTGAATATGAATCTTTTCCAACGAACAT TCAAAAGTAACGATGAAAATCATTTTAGGGGGGGGGGTTGTACTTTTACA GTGTGACGGGATTGGCACTTTTTAGTACGGTATTATGGGATTTGACGAAA GAAAGAGACGGGAAAACAGTATTTTGAAATCAAACAGTGACGGTATTTAG CCTATTTTTGCTTTTATGTTGGTATTTTAACCTCTACAAACCAGTGTGAC GGTGTTGTCATTTTTTCAATTTTCGGGATTCTGGGATTCAGCAAAATTTT TGACAGGAAAAGGTATTTCAAACCCTCCCCATTTTAGCAAACGAAACACA CATGACTAAACTAAAGCTATCAGAAAGTATCATGATATATTCTAAGACTT AACAATCTCAAGTTGAGATATAATACCAAAAATTAAACCCGGTAACAAAG GGAAAAGACTCGATTATTATTACACGAATATTACTAGTCATTTTTTTAAC ACGAATTGAAAAATTTCGTTAATAAAAACCCCCTTAATTAAAACCAGCCA TGGTGTCCTTGAAAAAGCAATAAAGTTCGTGTTAATTTTTGTCCGTTGAA TACTTGCCTAGTAATATTCGTGTAATAAAGTAATTACTGATCGATCAGGA GAAATCACAAATAGCACTACTCCCCTCTACGAAATACATCTCTAGTGTCG AAAATCTAAACATTCCATTTCAGTATGCTCAAATCAATATCAACCAAACT TGGATACTCATCTGACAAACAGTACATCAATGATACATCTTTGGAGAAAG TGTTGAAGGAAAAGACAGAGTTTCGAGTCACCAAAGTTACCGTCAAGAAA TGGGAAGTCATCGACCAAATCAAGATCCACTTTGATGATGATACGGAATG GTCTTATGGTCCGGATTGCGGTGATGAAGATCCCCGGGCACTCATTATGA CGGAAGGGGAATACTTGACCCGGGCAACTCATGAGAAATTGTATGACCAC GAGTCAGCTGGAGCATCTGTCGAATTTGAAACCAATAAAGGACGTGTTTT TAAATTCGCACCTTCAGAAATTGATAGTATCTCGCTGGGTCATGATTCGA ATAAAAAGACTGTCATTGCAGACGAAGGTATGAAAAATTAGATCATCTGC AATTCAGATACCATCAGGGATAACGGTTTGTTTGTTATCACTGGATGAAA ACATCCGACCTGATGTTGATTTAGAGGCAAAAACTGACGCCATATTAAAT TTCTCGGAGCTCCAATCTGAGCACAATCACAGTCGCAGGAGCTACAGTCA AAGTGAGTAAATGAGCAGGCGTCCATCTGACCTTGTTGATTGCAGAGAAA AAAATACAGTTTCACACGTCTCATTGAAATCATACGACGTTTTCAGAAAA GTAAAACATCGTATTTCCACTTCAGGTTATGAGATCGTTTGTTTAAAGAT CCACCGAGGCGAATTGATTGGTTCAGAACAACAACCGGTGCCAAAAGATG ATTTGAATAAAACACATCCAAAATCCTGGTGAGATTTCAATTCATATGCT TCAGCTAATCTAATAATAGAACATCATTTTTTATCTATTTGATTATGATA ACGGTCAAACCTTTGTATCTGAGAGAGTTGGCAACTTTTCGATAAAAAAA AAAAGAATGCGTGAGCTGAAAAAGATTATGCAATTAATTGTAGCGTTTTC CTACTTCTAACATATGAATTACACTCCTTTTTGGGTTTAGAAGACATTAT CTTTCTGGAAGTAAGAGTTATTGGGACTTTTCAAGTGTCCAATATTTACA TAACCCTTTTTATTTAAGGTACGTGTTGGCTTATTATGCAGAGAAAGAGG ATGCCGACCTTGACAATGAACTTCTACTGGAAGGTGTGGCTCCTACCCGA CCTTTCCAACGAACCAGAAATAAACCAAATGAAAAAGAAGACAAAAAGGA TGAAAGTAATGATAAAGTTGACGACAATGACGAGAACAAACGTCAATTTA GTGAATCGGGAGCGACTCTTGGACGACGAAAAAGTTTACGTAAGCGGCTG ACCAGCGAAGCACTGAACATCAATGATGCAGTTGCCGTTCTTCAGCGAGC TTCATCTCGGGATGACACTCTAGACGAACAAATACCACTATCACCACTTT ATCAACGAAGTACATCGTCGTTTCATCGTAGTATTTCCAGANACTATCAC CACTTTATCAACGAAGTACATCGTCGTTTCATCGTAGTACTTCCAGGGAA GCTAAAACTCCAACCGAGGAACGTAAACGTCCCAACCTTTGTCGTGGTGT ATCACTTATCGAGGATAAAGAATTTTTCCCATCAGATGCATTTACTTCTA TACCAGAAAAACAAGAAGAGCCTGCATTAGAAACCACTAAGAAAGAGGCT GACAACGAAAATAAAAGTAGACCCGATGAAGAGCCGACAAAAGACGTTGT CGAAACAACAACCGACGACAATGCGACTGACGTGAGTGACGACGAATCAG ACTCTGACTCCGACCAAGAAATCCTTGACCTAGATCTCGACTATTACCAT TTTCATGACCAAAGACAGACTCAAAACGCTTGGAAGAAGATCAAAGATAT TTGCAGTAAAAAGCGAGGTCGGGGTGCCATCCTCGTTGATTGTCTACGAT CAAGCGTCACTAAAAAGACGGGTAACAATAAAAGTATCGACCATTGTCGG GATATGGCAACACAACGAGGTTATTGTTCGTCAGAAGATGAAGATAATTA CGAGTTATTCGAAGTCTTTTACACTCTTTACGAAAGCATGGCTCAGAAAG CTGAATTCCTCATGTTTATTTCTACCATCTTCTTCATGTCGTTGAATTTA GCTGTTGGTGCTCATAAATCACTATTGGAAGGACAGATATTAACAGCAAT CGCTACCGACCCAAAATCCATCAACTGGCGTAAGATGAACACGTTGGAAG AGATGTTTTGTGGGGTCTTCTTCACATGTGATGGATCATATCTCAGTTTG TGTCGATCACTAATGCTATACTATTTCACCGTTCGTATGTCTCTCAGTTT CTTCAATATCATGAATAGCTTCTTGATGAAGTATTTATCAGATACCAAAA CAGCACAAATGGGACGTGATCTTTTTGTCCATGCTTTATTCCTGGACAAA CGGTTCTTTGATGAAACTAAGAACATCCACAGCTATATGAATGTCCAATC GTTGCACGATCTTCTCTTCGATACTATACCTAACATCATTACTTCGGTGG CACGTTACTTCGTAGTGTGCTACTATCTCATCAGTATGGATTTGAATCTT GGTTTGGCGTCTGTCTTCTTTACGACCTTCTTCAATTACTTCATCGTGAG CTACTTCATCAAACGAGACATTGAAAGGTGGAAGAAACAGGTATGATGAA TACTTTAATTCACCGATGAGTATTCTCTCTTTCCAAAAGAGAATATCGCT TCGCGCTATTGTGTTTGCATATACACGCAATAGTAGATAAAGCCACAGCA GAATTCATAAAGGCAACACTTCTAATGAGCCAGAAATCTCCTCTTTTATA AAGAGCCTTAACCAGTTTTCAAGCAACTTTAGCTAAAAGATTTGTATGTA AACATAACCTAATTAGGGCTTTTATTTACTGAATTGGTCACAATTCCAAC CACCTTTCCATTCCAGGTACAAATCGATCGTGTACATGGTCAAATTTCGT ACGACGTTTTTGAGATGATCAGTACAGTGAAAACATTCGCCAAAGAACGA TACCATCAACGCGAGTATGACGAGTGGTTCGAATCACTTATTCAAAGCAT GAAAAAAGGTAAGGGGAAAGAATATTGAACATGGAAAATGGAAAATGATC TCATAGCCTAATTTTGGCCTATATTTACCTTATTTTTGTACATTTATCCT AAATGAAAAGTGCAAAGTAAAACCTTTAAAAGGTTCACATTTGACATTTT TAAAAAGTCTCACACTCTTAGTCTTTTCACTGTTAAAGGTTCTCAAAAAA ATAGTTAATGATCTTTTCATATTTTCAGGAATGAGTTGGGAATACTTCAG AAGCTTTTTGGAAGACTTCATTGATGCTTGTGAATACATCGGAATGATTT ACTACGGCTACATTCGCTACACGGGTGACAGTGGCATGACGTCATCTGAT TTCATTGGATTTATTATTCTATATCAACAACTTCATGGGTTGTTTTGTGA AGTAAGAGATAACTTGATGTGGGTGGGACGTGGTTTCCATGATGTTAAGA GATGCACAACTCTCAGAGAAACGCAACCAAAGATGATTAACGGCACCAAT AAACCAGAAAACATCAAAGGTATGAATTTTGAATTTACATTGAAAAACAT AGAAAAAAACACGTGGGAAAATGGTTGAAATGCATACCGTACCATACCAT CTTTTGCATACCTGGCGACCAACTGAAAGTCTTAAGCTTCAAAAGCTTGT CCTTTGATTAAAAGACATCAATATATAAAAATAATATAGAGAAAGGCGAG AATTCGAAAACCATTCCCATTAAATGACCAAACAACCAAACAGCCATACC TCATCATAATTATACTTTTTCAATTTATTATTTCAGGAGAAATTGTTTTC AAGGATGTCAAATTCAAATATCCGTCTCGACCCAAAGACCAAGTTTTGAA GGGCTTGAATCTGACAATTAAATCCAATTGTATGACTGCAATCGTTGGAA AATCAGGAGCCGGGAAAAGCACCATTGCAAAACTGGTAACTCGTCTTTAT GACCCCTCATCTGGTTCCATCACCGTAGATGGTGAAGATCTGAAGTCCTT CGATGTCGAGTATTTCAGATCCAATCTGGCAGTCGTCGATCAGAGCCCTG AGCTATTTAACAGACCACTTGCTGAGAATATCGCGTATGGAATGGTCGAT TCTGATCAATGTACCTATGCTGAATTGGAAGCTGCTGGGAAATTAGCCAA TTGTGATTTCATATCAAAATTTCGTGAAGGATATTATACGTTTGCTGGGT ATGGAGGGAATGATTTGTCAGGTGGACAGTTACAGAGAATTGCAATCGCC CGCGCGGCCATAAGGAATCCAAAGATTTTGATATTGGACGAAGCTACATC ATCGCTAGATTCTGAGAACGAGAAAGAGGTTCAAGAGGCGTTGGAGAAAT TGATGAAAGGACGAACCGTCATTGTGATTGCGCACCGGTTGAGTACCATT CGAAATGCTGATAATATCGTGTGCATGAAAGACGGGACTGTTGTGGAGCA AGGTACCCATGACGACCTGATGGAGAAAAANCACCAATAAACCAGAAAAC ATCAAAGGTATGAATTTTGAATTTACATTGAAAAACATAGAAAAAAAACA CGTGGGAAAATGGTTGAAATGCATACCGTACCATACCATCTTTTGCATAC CTGGCGACCAACTGAAAGTCTTAAGCTTCAAAAGCTTGTCCTTTAATAAA AGACATCAGTGTATAAAAATAATGTCATAGAGAAAGGCGAGAATTCGAAA ACCATAATCCCATTAAATGACATAACAACCAAACAGCCATACCTCATCAT AATTATACTTTTTCAATTTATTATTTCAGGAGAAATTGTTTTCAAGGATG TCAAATTCAAATATCCGTCTCGACCCAAAGACCAAGTTTTGAAGGGCTTG AATCTGACAATTAAATCCAATTGTATGACTGCAATCGTTGGAAAATCAGG AGCCGGGAAAAGCACCATTGCAAAACTGGTAACTCGTCTTTATGACCCCT CATCTGGTTCCATCACCGTAGATGGCGAGGATCTGAAGTCCTTCGATGTC GAGTATTTCAGATCCAATCTGGCAGTCGTCGATCAGAGCCCTGAGCTATT TAACAGACCACTTGCTGAGAATATCGCGTATGGAATGGTCGATTCTGATC AATGTACCTATGCTGAATTGGAAGCTGCTGGGAAATTAGCCAATTGTGAT TTCATATCAAAATTTCGTGAAGGATATTATACGTTTGCTGGGTATGGAGG GAATGATTTGTCAGGTGGACAGTTACAGAGAATTGCAATCGCCCGCGCGG CCATAAGGAATCCAAAGATTTTGATATTGGACGAAGCTACATCATCGCTA GATTCTGAGAACGAGAAAGAGGTTCAAGAGGCGTTGGAGAAATTGATGAA AGGACGAACCGTCATTGTGATTGCGCACCGGTTGAGTACCATTCGAAATG CTGATAATATCGTGTGCATGAAAGACGGGACTGTTGTGGAGCAAGGTACC CATGACGACCTGATGGAGAAAAAAGGTGCATATCATAAGTTGATCTCTCA ACAAATTTTGGAAGACAAGAAAAAGAAAGGTGACGAAGGCGGAGAGCAGA AAAGTGTTGATGGTGAAGAGCAGAAAAGTGATGTCGAAGGTGTTGATGTT AAAAATGGTGAGAAAATTGTTGAAAAGAGTGTCGGAAACAAGGTTGACAA CGAAGAAAATGTTAAAAATGTTGATGGGGAAGCTAACAATGTTGATGGAA TAGATGATAGCGAAGAAAAGGAGAAGGCCATTGAAAGTGCCGTAGAAAGT GCCGTTGAAAGTGCTGCAAACAGTGTTGACGAAAAGGAGATTGCTGATAA GGATACCATGGAAGTTGAAAACCTTGGTGAGATTGTTGAAACAAAACAAC CTGTGACAACTTGGGGTCCGTACAGCGTGAATGAAAACAGTGAAAATAAC GAAGAAAAAGCTCCAGGCGGTACTACCATTAAGGGAGAAAACGATAGTTC AGTTGAAACTACAAGTGGAAACAAAGAAGAGACCGCTGAAAAGACTGGTG ACAACAGCCTGCTTTGAAGCCTGTATAGTTATTTGCTATTACTTATTTTA ATTTATAAACATTTTTTGTAATAACCTTTGTAGACAATTTTGATAATATT TAATTATAGGAATTTTAGGACACACTTTTAAAACGTTATTTGGTTCAATT CAGTAAATCAACGATCTTTCTTTGAAATTGAGTTTAAGATGCCATGGTAT TTGTGTTAGATTCAATCAAAAGAAATTTTCAATATGTACAATATTTTAGG ATATAATTATTTACAAAATACTTTGGAAAAATACCTCAAATAGTTTGTTG TTATTGAGTAGAAATAAGAAAAGTCCATTCGCTTTGAATGTGCACTACTG TTTGCTACCATGTGGAAACCATGTCAGGGAGTAATTCCCTTGAGAGTGGT TTCTATATGGTACCAAAAGCAAATACACACTTAAAGCGACATAAAAGTAG TAAAATGTAAACATTGCGCGAACCACGTGTCATTAAAGAGAACAATTAAA ATCACGTGTCCAAAACAAACTTGTCAAACAATTGAACAATCAAAATTAGC CATATTTGGTTTAATTTTTTTTATTTTGACATGTGACATTTGTTTTGATT TTGTAGCCGCTGCATACAGTTTGTTTACTCAAGGTTTAGTTAATCCCCGC ATTCCACGAGGACGGAAGAAACTTTCACGACATTTAGGCGACAACAAAGG TTTGAAGAAACATATAATGTGATTTTCAGTCTGGCTTACACAATCATTAT TTTGATCCACGCAAAGCCTAAGATTCAAATAACAAAACGGCTCAAAAAAT TCGTAAATAAAAAAGAATACAAAAATACAATTATGATTTAAAAAACGAAA AAACAAACAGAATGTACAGTGACATACAAAAAACGATAGGAGATTTCGTA CATTCACCAAAATAATTACATTTTTGTCATTTTTCAATCGAACACTACTT TATTTACAGTACATGTAAAAATCTCTGATGAGATTGAAACACAATAGCCA AATGAGCATTAGTATACCATAAGTTGGTATGAGATGTTGAAATTTCTTAC TGTTTTTAACAAATTCATCAAACCAAACCACCAGTTCTGCAACAAACACG ATTTAAACATCCTTGATTTTGACATCCATTGGCAGAATAATCATAATCTG TTGCAATGTTATCACAGTATGAAAGTTCATTAAGATCAAGGTTCGGACAA CTAGTGACCAGGTTCTCAATACCTGCACTGGTGACATTGATGCAACCTGA TAGGTCCAAATGACGTAATTTTTGCAGACAACCATGTTTAGTTAACGCCC TGAAAATTTAAAAATATATTGAGTTTCATAGAAAGGACAGCCTGATCCCC TTTTTTGTATCTCCCCTTTCGAGGAAAATTTCCAGACTCCCACTTCTCGG AACTTTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067595TCONS_00067595Clytia hemisphaericatranscript
TCONS_00067594TCONS_00067594Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067595-proteinTCONS_00067595-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_471supercontigscaffold_471:85205..95013 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.39 tpm) - - (58.19 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39 0.66 0.61 0.56 13.04 10.16 7 6.8 2.31 2.89 2.46 1.72 13.79 12.46 4.69 4.87 11.9 19.22 16.71 20.34 10.04 10 6.33 7.47 12.21 10.11 58.19 46.85 2.94 2.5