XLOC_041983 (gene) - C. hemisphaerica

Overview
NameXLOC_041983
Unique NameXLOC_041983
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_466:424821..434325+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041983 ID=XLOC_041983|Name=XLOC_041983|organism=Clytia hemisphaerica|type=gene|length=9505bp|location=Sequence derived from alignment at scaffold_466:424821..434325+ (Clytia hemisphaerica)
cttccaaagattttaaacacCGAAATCGCTTGATAAGCGATTCAACAAGA TTTGCCAATGATCTAGCAGCCTCGTcggataaaaaaaaaactacaaaata tcttttcactttcactttcaaacAACAGTTCAAAGTCCTGGCAAAATCAC ACGCATTTGAGTGAACTTTTGGCTGCTGAATGTTGAAAAAGAGTTACAGG TATACCTTCCTTCTTTCAAGCTTGTTCTAAACTTTCTGAACACAAATATG AATATTTTGACACTTGAAATTAGATGTGGAAAGTGGAAGCAATGTAAAAC CATAAGATGAGACNTATTTTGACACTTGAAATTACATGTGGAAGCAACGT AAAACCATAAGATGAGACAACACAGATGATTGTACATATCACAATCAAGG CCGGAAAAAATCTACATTTTTTGTCCCCACCCTTCACACTACCAACCCAA CCAAACCTGGAAACCAGCCGACCCAAAAAGTTTTACTGTCATTTTAGAGA AGATTgtattttcttcaaatcaaaGCCTCCCAACTAATAAACCCGGCCCG CCAATCAACTATCTATTATTCCCTgccgtgtgacgtcattttttctaaga aaatgaTATAAAGAATATGTACAAGATGATTTAATAAAACTTGCTTAGCT GCAAGGCTTTTAGTGCTCCCATATGGACCAGATTTGGACctgcacatttt ttctttttgtttttttattgctgTAAGTGAAAATATATATGTCAGTTAGG AATGTCACGCAGTTTGCTTCAGATTTGGTGTTGAAAATAGTGCCTAAGCT GGATTTTGCTGAACCAGTCTATCTGACTTGTCTctcaggctagctctaaa gctctaaaacagcatccaataacatgaaaaccagaatatgattcttcaac gGGAATCaatataaagtgcacttacccagacggtactaatcgaacgttcg attgtgatcgaagtaatcaagAATGATCGATAATAATTGAAGGTGATCAG TGACCACTTTTCGATTCTATCGGTACGGTGATAGAATACTCACTCAACTC CAAATCATGGCATTTTCTTTGACCATTTTCAATTTGTTCGATCGtttcga ttactgttcgattactttcaatcactttcgatcatattgaatactttcga tcatattgaataccttcgattGTGTCAAATATGTTTCCATCTCGTCCAAT AAAATATGAGACTGAGTTTATTTCGTCCAATAAAAACATGCGATttacaa ctttcgttttctccgaccaatcaAAATGTGCGATATGGGTTATTTTCTTT CCACACTGCCGGACGAACCACTGCTCATTATTATCCCTACAGGAGAGCGG ATTCAAACAGTGTGAGAGAAATGGTGAATCATCGGATttccaaattggat gattgagagactcataaaacccatcaaaagtatttgaggaaacccagggc gaGCACACTCAAAATGGCAGGGAAGTACTGAAGGTGATTCTTTTATGGCT TCTTTTTGTGGTTTGGTTTTaggtcaatgtttttggttttatcTATGTAA TCAACTGGTTATCaaagtaatcaattggttatcgaaagtaatcaataaca atcaaagtactcaaaCGGTTATCGAGTCTTCgaaagggttgttaagaaag tgatcgaagactcacaatttttttgaaattttggtactcgaAATTCGATT GTTAATCAATAAATGGTtgttcgattacttcgatcattattgattacttc gataatcAAATGTattgattagtaccgtctggacttacaaacatcaatac tGTATGTCATGTCAGATCTatataacaaaattaataacggcactgtcagt ATAGACcaaaactcctatatcaagaaTATGGGATTTGGGGTGCGGgccaa ttttactttcattttcagggtttcactttcgatttcaagccaacatctta gcaacgggatgctcgcccatagttacaggggtttgcgcaaaaaataaaac atagaaaattttccaaatcccccattttgattaatgcaatgaaaaatgaa acttttctatgtttcacttttttgcaccaattcttcaaaatgaaaatatt caagatttttaaagttcttcttttattcaatgatttttcacggcactttg ttgacaatctaactctcgcatcgaATTCccactttcttcagtaaattgga gatgagaaaaaacctaagctttaggatcacggattgaaacaatatatatg aagggtgggattttacagccgcgcGTCCTGTAAGGCACTGATAGGCcaca ggtgccaaaaagaagggccgtttcAAATgcagcaacctcattggtggaaa tttgataaacagctgcaaaggagcgccggaaagcaatcagtagaagagac cactttcgtttttgttgcagatttcgatgtaaacttctctcaggggtTAC TtatcaatgtgttgtgtcagcTTGTTAGCATtttattgttgtaaagggaa ggataaaagaggtaaaactagcctagtttctaatcctgatatactgtagg agtttaagcttagactggcttgcgtgcagcatagggtacaaagtccaaat atgtgtttcccataatttttgtatgaagagttaNtggcttgcgtgcagca tagggtacaaagtccagaTATGCGTttcccataatttttgtatgaagagt tatgTCTATACTGTATGATTCCCATTGAataatcatattctggttttcat gttattagatgctgttttaaagctttagagctagcctgtcaTATTCCTTC CTTTGTTTTGAGTGTAAAACTCATACTCCTTTGGGATATGTGTGctgctt ttgttttgaatattgaatttctcTGTTTTCATTGCATATGTACTATTTTT CATGCAACAAAATCAGTTCAaactgattttgttgcagaCACTTGCAATTT GttctgcaatatttttattgcgtTGCACAGCAATtgcagaaaaaattgac gtgctacattttgcaatttctcgCCCGCTTGCAATGCAACGCtaattgca ttgcagccgcctgaaaaaactatcagtgtagccttaACTTTAGTGCTAAA ATTTTATATTcttttttatatactttttatttttatacaatctTATAATT TGTATGTATGGATGTATGTATGGATAGTGGGTCTTAGGACCTTTTATTAC TTAAaatatagatatatagatagaCATTCTATAGTTGGCAAGTTTCAATA TTACCAATGCGGGACAAGATATGCAAGCGGGGTGAGCAAAAAAATTAGCT GGGGATTCGGGCCCATTGATTTGATGGAAAACAGCCAAAACAATATCTAA ATTTTactcttttatcatttttaagatcAATAATTTTCCTCATAATTTTC CTCATGTTGGTTGTGTattatttgtcattttttggCGTGACTTTGAGTGT AATTTTAATGGGTTTTCAATGGATTTTCAACACACTGAGGACGAGGTCGA TTTTATGCTATTATTGAACTACTATTCTTGCTTTCACTCACTGTGCTAAA ACTGCAAGGCCTGATCTAATGATGCAGATAAATTCTATTAAAAGAATAGG GTAATCCTCCACTTGTTAGTGTAAATAGAGGTAAATATTAGTCTCTAATC ACATGAAaacttgaaaaggaaaaattgaggccagttcattttccaaaaaa aacatggttggtcatggtGATATATGCACCTTGTTTACAGACTTTGATGT GATTATGGATGTTTTGTAAGGCTGCTTTTCAATCTTGAAAGActgttttt tattaatttctttttgactgccctgggttggcttgTCTTTTTCTAGGAAG AAGAAGTAGATTGTAGCTGAACAACAGATTCAAATATCTAGGAGAAGGTG TCCTAAATTTAGTTTGACATTTTAAGGGAACAGCGCAAAGATATTTCTAG GAGTAAGGATCCCAAAGAATTCAGAACAACAGATCCAAAAACTAGGTTAA CTAACTATATGGTCGAACAGAATATATTCAAAAGGTCGTCACTGGGCTTC TATCagtataaacttttttttactatactaGCCAGTACTAGCAGCTTTTT TCCATAATCTATGTGCAAGCAtagaaaaatatctaaaaccTGGTTTTAAT AAATTTCCACACAGACGAGATAGCTGGGCCAAACCATAAACCAGAGACAT GATTATAAAATGTTTGACAGTAAAAAGGTTGACAGTCTTGATATCCAGGC TACTCTAAACAATGGCCATTTTACATTTGTATGGATTTAAGATatttgat attctcaaaaaCGCCTTATATATTACCCCTCCTGCTGCTGCTTACTTTTT GTAATCATGTTTATAACTTGTTGTAATTATCGCACTAATTTATTCCTCAT ACTCAGAGTCCAATGTGAAATACAACAATGAGAAGAAGTGAGGAAGAATT CAAGCAAGTGGTAAACATTGAAGGTAGTGCAAACATGACCATGCACGATG CTGATTATCTTCCATCCATTGAAGTCACAGACCCTATTGTCCCTGTCAGc tcacaaccaaaagttcaTAAGCTCGAAGAGGGAAATGTACCACCCTATAG AGCAATTTTTCTTATTGCAAATGCTGCTTTGGGAGCAGGGCTTTTGAATT TTCCAGAAGCATACAAAAAAGCTGGTGGTTTACAAACGGCCATTACTATC CAACTGGTATgacaatgtttatttttccatAATATATTTTACGGTCACAA AAACTTATCAAAACTTATCAAGTCGATTTTGGGAAGCAAATTTAAATTCC TAATTTGAAATGTATTTATAAGTATTTTCAACTTTCTTGATAACTCATTC ACactttttaaagtcgaaaattgatttataaaaacactggcaataaattt ttatctataattttttatatttattcaaTCAGGTTTTATTATGTTTCATC ATTGGTGCTTTCCTGATTATTGCCAGAGCTTGTAACCGTTATCAAGCGCC GACTTATCAAGAACTTATCCTGGGAATATTGGGTCCCAAGTTCTTTTGGC CACTTCAAATTATCATTGCTATCTACTTTTTTGGAACAGCCATTACCTAC ATGATTATTATTGGCGATCAACTTTCGCCTTGTAAGTTTGATCTCTAAAT CTAGTAAGAAATGCTTAaaaacaaagtccaaaaatgttttcattcattaC CAGGGATTATGTTATAAAGGTGGGAGCTGAAAATCACAGATTTTTCATTA CTCTTTAGTTTTTTACatatattattttaatgtatttGCAATAATGATGT CTTTAGGTAAGGTATCACAACCTGGCTGGGTCTTAGAATAATTGcttaaa atttctgattttAGTTTTCCAGTTTGTGACAGGAGAGAGTGGCAAATGGT ACACAAACAAGAAAGTCTTATACACcatattttcattgttgtttTTGCTT CCATTATGCCTACCAAGAAGATTGAAACTCCTTAGCTATACAAGGTTTGT GGTTTTTGTTTTCGTTGCATTTTGTATGGTATATtcctgtttcttctttt tcaacttgggtagaaaaacatttaaagttgttcatttttgaaattgttgT TTTTCCTAAAGCTTTAGAATAAATGAATAATTTGAGCATGATCATTTTGA ACTGACTACAATTATCTTTATTGTGAGGCTAATAATTCTTTTTaacacct tattacacgaatattactaggcaagtattcaacggccttgaaattaacac gcaaaaaattaacatggattttattagctttttcaaggacaccacggctg gttttaattaagggggtttttattaacacgaaatttttcaattcgtgtta ataaaatagCTAGtaatattcatgtaataaggtagttTCACAAAAAGATA TTTATTATCTTTATAAATTTCACACATAATAAaatcttgatattttttca tGTTCAGTTTCTTTGGAGGCATCGGTGCATTCTTCATAACATTTATCATT ATCTATAAACATTTTTATGGAGGTTATTCAAACCATGGCCCCGATGAATA GTTAGTGATTTATCTTTATGACTTTATTTATAACTCCTATTCTGCTTACA TTTTATTCGTACATCggtcggtcgttacttgacctcgggcaatatttctc agtacagccctcactaaccggtcattattgctTACTTTAAACAAATTATG TAAATTGTTCTGTTTTTTTCGATCAAATCATGTCACTTGCGACCAAACAT AGCTGTTGTAAAATgactttaccaaaaaaaaaaaaaagtttgggtCCTTA AATTTCGACGATTCTGGTTTTAGCCCATGAGTTAGAGCGGGAAAATCGGG CTCACTTAACTTCGTACATTGCTTGACTTTTATTTACTAGtaactgtttt tattttcagtacTGAAGTAAAATCCGACTGGAAATCCTGTTTGGGTGTCG TACCCGTCATTTGCTTTGGATTTCAGGTTTGTTTCAACTGATAGTGATAg ttagctctactgtaattatTAATTTTGATTATGATAAATTCTAACAATTT ATTTGCTAATTTATAATGATGCTCCGTTTCATTCATTACAAGAGGCATTC AGCCTTCTTGCTTCTTGTAACTCTAAAATTTTCTTGATAGTAGAAATGAC TAAAACTTTTTTCAAGAACAGAGTAAGTCTTAAAACTTTTTtagaacaaa taaaaaaattatttcatttaatgaatgaatgaataaatgaatgaatgaat gaatgaatgaatgaaggGAATCTTACGTATCGCTCTGTGCATTAGGATTG AAATTACTAAATACTTTCTAAAAAAAGTCTGAAATATTGTTTTAAGCAAA GAAACGACTTACTAACTTTTCTCTTTCAGTGTCACGTGTCTTCTGTGGCA GTTTATGCTGAATTAAAGAACCGAAGTACCAAACGTTTTTTCATATGTGC TTGTTTTGCAATGTTAGTGTGTGTCCTCACTTACTCGCTGTGTGGAGCGT TTGGTTTCATGACGTTTGGTCGTAAGACCAAAGCTGATATTCTTCAAAAT TATGACGACGATGACACACTGGTGAATGTAGCTCGATTGGCTGTTGTCTT CATCTTGCTTTCTTCATTTGCTATCATCACTTTCTGCGCCAGGtgacttt ctttatttttgcaaTTCCATCATTTTTGAGGCTAGTCTTTTTTATCAAGG TTCATTCATTCAAGACTTTAAGTCGAGAATAAATCATTATTATAGTTTGT CTATGTAACGAAAATAAACAATTAAAAGTCCTCATTTTCTTACTTTGATG GTATCCTATCTCAGGATGAGTTGATTGACTTTTCTTTCACCAAATCCCAG AGATCCCctgaaaaaaactttcgaaaagtTCCTAACCTTAGAAAgatttt cttgacttttttcGAACCCTTGATTAGACCTAAAAAGGGGGAAATCTAGA TCCTcagtttttgtctttttgttgtattcgtaacccttagagagacttgg AAAGGTCAAAGAACCACTCATACCAAAGTATTCTCCACCAGGCTACTAAC ACTTTTATTACTTTCCATGATTTTTATCCGTTTACAGGACTGTTATTGAT GATATAGTTGTCAAGATTCGTAAATATAACGAGCATGACCAAATAAGGAC AGAGCGACGACGACGAGTGATCGAGACATTGTTATGGTTTGCATTCTCAT TGCTGTTAGCTTTGGTTGTTCCTGATATTGGAGCTGCCATCTCCATGATT GGTGGTTTAGCTGCTTTCTTCATCTTTGTTTTTCCAGGTATGTGTTCTAT TGTTGTTAAGTCATGTaacttccgccattatgaaagcaaacattcgattt gcgtAAGTGATCCCATCGTACAGATTATGGCAGAAATTACGTAACTAAAC CAAGGATGAAGAAAACCTCTATTAGTACTACACTTACCTATAACAATTCA AAAGTTCGCTCTTAAAAATCAAATGGGTCTGATTGATTGAAACTTAGAAA GATGATGTAATTGGCCTAAGTGAACCAATCAGTGCTGATAAAAAGCGNAA AAGATGATGTAATTGACCTAAATGAACCAATCAGTGCTGATAAAAAGCGT TTATTGTTAAGGGAaattttggattgttataggtaagtACGTCCAGGTCA AGTATGGGTAGATAACTCGTCGGGAAAGCGGAAGATGTAACTGGCTAGGT ACGTGATTGACCAAACTCACTAGGTCATCGCATATATATCAAAATATGAC GGGATTGAGTTAAAATTTGCAAGGTTCGAATGGGGTTTACGAAACCAAAA AGGCTAAgtatgaaaatataatttttaaataaaaagtttggACTTTGGAC TTTCTAAAAGTCTCTCTTTCTTATTTTGGCAGGTTTCTGTTTATTGAAGA CTATCAATCTGGACAAAATTAGATTAACCAAAAAAGATTGGGCACTAGTT GTGGTAGCGATCATGTATATTGCTGTTGGTATCTTCATTTTTGGTGAAAC TACAACACTGGCCATTCAAACTGATTTAAAACCGAGAACAATTTTATAGT TCAGCTATTGATACTGTAATCATGTAAACATTTTGTATGGGAGGAAGATC TGTTCTTGTCGATCCCAACACCTGGCAAAGTTCAAAATTCATTGAACACT CAAAGCTAAAATGACTAACTTGCCGGGGCAGACAATCTGTCAGAAATGGT ATACAAATTGGAAAAACTAGTTGACCTAGTTTTAATTTTAGttctcttta atttatattccCAGTTTATTAACTCGTTTTTTATGATTCCGATGATGCTc actaaaaaatattatatcatGTTCATCAGTCCGAAAGTGGTACCGGGGga gggggcactcatatggtttgacctacggcatgtgccgcccttaatgcatt gtaagggtgtacttttgatagagtgcactacaagACTCTTCTTTTAGCtt gatacactgtaagggtgtggtTGCGGACTGCTGAATTGCAAGTCTGGCAG TAAAATTCTCATGTATTAGTTTTGACTCAAACCtatattgaattgttttc caCATTGTTTCGGCATCGTaggctcattttcaggtggcttcagcaaaata agatatgaaatcaaactacactgtaagggtcagaaaagtTAGGTaaaatg cattgtaagggtaTCTTTTCACTTCTGAAGGGctgtactgtaagggtccg attttgatAGCCATTTTTTTTGGCAGTATATACTGTCTCTGGCTTAGGAA TCGAGTGCCCAACCCCCCTCCTGGGAGTGGTACAAGTAGCTCTGGGGACG AGATTGATGAAATTTAGATGACATTTTTAGATTTAGCTGCACTAGGATCA gaaatgataaatatttttgttctaAAGCACAAACAACTTTACTTAAATTC TATTCTTGTGtcgaaattttcatttcacGAAATATTTTGCATCCTGTgat tttttgcgattttcgACCCGTGAAAGTATTATTTTTGCGATTAATACAAT TAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067204TCONS_00067204Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067204-proteinTCONS_00067204-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_466supercontigscaffold_466:424821..434325 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC38A7putative sodium-coupled neutral amino acid transporter 7 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (3.16 tpm) - - (20.68 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.81 9.62 4.35 3.16 3.88 3.34 6.96 6.81 10.82 13.95 17.43 8.78 10.16 8.57 11.35 14.15 11.58 12.09 9.38 17.27 8.79 9.89 13.05 14.65 13.74 17.81 15.69 15.98 20.68 16.52