TCONS_00067204-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067204-protein
Unique Name	TCONS_00067204-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	465

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067204-protein ID=TCONS_00067204-protein|Name=TCONS_00067204-protein|organism=Clytia hemisphaerica|type=polypeptide|length=465bp
MRRSEEEFKQVVNIEGSANMTMHDADYLPSIEVTDPIVPVSSQPKVHKLE
EGNVPPYRAIFLIANAALGAGLLNFPEAYKKAGGLQTAITIQLVLLCFII
GAFLIIARACNRYQAPTYQELILGILGPKFFWPLQIIIAIYFFGTAITYM
IIIGDQLSPFFQFVTGESGKWYTNKKVLYTIFSLLFLLPLCLPRRLKLLS
YTSFFGGIGAFFITFIIIYKHFYGGYSNHGPDEYTEVKSDWKSCLGVVPV
ICFGFQCHVSSVAVYAELKNRSTKRFFICACFAMLVCVLTYSLCGAFGFM
TFGRKTKADILQNYDDDDTLVNVARLAVVFILLSSFAIITFCARTVIDDI
VVKIRKYNEHDQIRTERRRRVIETLLWFAFSLLLALVVPDIGAAISMIGG
LAAFFIFVFPGFCLLKTINLDKIRLTKKDWALVVVAIMYIAVGIFIFGET
TTLAIQTDLKPRTIL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041983	XLOC_041983	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067204	TCONS_00067204	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 58..444 e-value: 1.1E-56 score: 192.3

Blast

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BLAST of TCONS_00067204-protein vs. Swiss-Prot (Human)
Match: S38A7 (Putative sodium-coupled neutral amino acid transporter 7 OS=Homo sapiens GN=SLC38A7 PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 3.279e-94
Identity = 161/417 (38.61%), Postives = 238/417 (57.07%), Query Frame = 0

Query:   49 LEEGNVPPYRAIFLIANAALGAGLLNFPEAYKKAGGLQTAITIQLVLLCFIIGAFLIIARACNRYQAPTYQELILGILGPKFFWPLQIIIAIYFFGTAITYMIIIGDQLSPFFQFVT----GESGKWYTNKKVLYTIFSLLFLLPLCLPRRLKLLSYTSFFGGIGAFFITFIIIYKHFYGGYSNHGPDEYTEVKSDWKSCLGVVPVICFGFQCHVSSVAVYAELKNRSTKRFFICACFAMLVCVLTYSLCGAFGFMTFGRKTKADILQNYDDDDTLVNVARLAVVFILLSSFAIITFCARTVIDDIVVKIRKYNEHDQIRTERRRRVIETLLWFAFSLLLALVVPDIGAAISMIGGLAAFFIFVFPGFCLLKTINLDKIRLTKKD--WALVVVAIMYIAVGIFIFGETTTLAIQTDL 459
            L+ G      AIF++ NA LGAGLLNFP A+  AGG+   I +Q+ +L FII   +I+A         TYQE++  + G       ++ IA+Y FGT I ++IIIGDQ       +     G SG WYT++K   ++ + LF+LPL +PR +    Y SF   +G +++T I+I K+ +       P       + W +    +P ICFGFQCHVSSV V+  ++    K +      AM++ +  Y   G  GF+TFG     D+L +Y  +D  V VAR  ++  +L+S+ I+ FC R V++ + ++ +     + +  ERRRRV++TL+WF  +LLLAL +PDIG  IS+IGGLAA FIFVFPG CL++   L ++   K    W LV   ++ + +G FIFG+TT  AI  DL
Sbjct:   46 LDRGTTSTLGAIFIVVNACLGAGLLNFPAAFSTAGGVAAGIALQMGMLVFIISGLVILAYCSQASNERTYQEVVWAVCGKLTGVLCEVAIAVYTFGTCIAFLIIIGDQQDKIIAVMAKEPEGASGPWYTDRKFTISLTAFLFILPLSIPREIGFQKYASFLSVVGTWYVTAIVIIKYIWPD-KEMTPGNILTRPASWMAVFNAMPTICFGFQCHVSSVPVFNSMQQPEVKTWGGVVTAAMVIALAVYMGTGICGFLTFGAAVDPDVLLSYPSEDMAVAVARAFIILSVLTSYPILHFCGRAVVEGLWLRYQGVPVEEDVGRERRRRVLQTLVWFLLTLLLALFIPDIGKVISVIGGLAACFIFVFPGLCLIQA-KLSEMEEVKPASWWVLVSYGVLLVTLGAFIFGQTTANAIFVDL 460

The following BLAST results are available for this feature:

BLAST of TCONS_00067204-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067204-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
S38A7	3.279e-94	38.61	Putative sodium-coupled neutral amino acid transpo...	[more]

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TCONS_00067204-protein (polypeptide) - C. hemisphaerica

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