XLOC_041913 (gene) - C. hemisphaerica

Overview
NameXLOC_041913
Unique NameXLOC_041913
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_463:102030..110720+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041913 ID=XLOC_041913|Name=XLOC_041913|organism=Clytia hemisphaerica|type=gene|length=8691bp|location=Sequence derived from alignment at scaffold_463:102030..110720+ (Clytia hemisphaerica)
GTTTGATTATGTGGTGTTTAAATATAGCGGCGTTCGAAAAAGTTTACAAA CATCTCGAAGAAAATGCAGAATCTTTCGAATGACATGCTTCACtgagttt tgtttcatttaatGTTTTGGTTGTTTCGCGAACAgtcgaaactttttttt tgtgcgacgctgaaaaaaaaatacaaaaactttaGCGTGGAAATTTTAAA GTCTCGAAAAGGTTAgtataatatttcttttgttttttgtctCATTGTTT GTTTTACCTTTTACTTTATTTTACCTCTCTGCAGAATCTTCATGGATCCA ATAAAGCCCGGGTTCACGAACAAAgatttcagtttcaaaatttggcCCTT ACAGTCTATCTAGAGCGAATCTGGGCAAAAAGATCAGCCCCtacatttta ttgaaatttttgtacatttctTGAGGCAAAGATTAGCAGATTTTCCGGAA CAGTCCCGACGGAGGCGGGGAGACtagggagacttcagcctccccaacTT TGagcaaattagattttttttctcaaattcctagtgagttttatctcatt ttgagccttcagcctccccacttttatggTTGTTCCACTGGGCCTGGGAA TATTATTTTTTCTCGAAATAATTTTACCATAACACCTTCGTTTCTCTCCC TTTTTACACTCTTACAATACACTTTCCTTCACAATGACCTTTATAATGCG CTTTGGGAAGTCTGATAAACTGTCTTTGAGAGCCAGGGGCCTTAAAACAA CACACTAAACATCAACAGGGAGTGGTTTTGACTCAGTTGTCAACCTATTT CATACTCGTGTATCagttacaggctatattctattttcagtttgaagGGG GAATACAGAAATCTGTGCAGATTTTCCTTCGAGGCAGAATtcttattcat agaattatatttcacaggtcttaGGTGCCAATGTTACTtagtataccttc aatatctattttgtcATGTTTCTGTTGTTCCTCTTTCGTATTTACCTGCT CTAATTCCACCATTCCATGTATAATAATgtttcgttttcttgattcgatg tctttttcttcattcttctttttttgttggtttttctCTCACTActgatt tgaaattatccttGTGTTTCTCAGTTATTCCAgcgtatgttttttctgat gttttttttttatgtatttcGTCGTTtcctttatttcttcttttataatc tgcttggtttttatttcaaagtcagccaCCTTATTGGTTAAGATGCTTTC GATATCGTTCTTAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNgtttgctttatttcttcttttataatctgcttg gtttttatttcaaagtcagccatcttattggttaagatgttttcgatatc gttcttaaggctgcggttctttgctagctggtttttgagctttttaatga cgtcgtccttcttctcaatctccctctgcatcatatgatacgagttctca cctattctactcattagagatcgtgttttccgcacgcaattctgacatag atattgttcgttataagttttggcaaaaatttgcagctggtaaagcggta attgtgtgcactcgtagtgTACCATGCGGTGACAGTTTCGGCATTTTACA CGGTTTTCGTCATCGTCATCTGAGCAGGAGGTGAGAGTGcgtgtttggtt ttgtttagcttcttcaaatggttgtttatattgctttttgtcggtttttt cgttGTTTGTCATCATTTAATTGACTTGGGAATTCatgaaatattttcta ttgttGTCGCCTTTGTAAAACTGATTGAAAGTCCGACGATTCAGTGACGC GGCCTCTACAACAAGATTTTAAAGCCAGGCCCGCGCCGGCGGAagcttca gcctccccacttttgaacaaaattttttctccaattcctGGCGAATTCTA TCTCATTTTGAATCTTTAGCCcctccacttttacggttgttccgccgcgC CGGAAAGTCATATTGTAGGCCCTACACTCTACCTTCAACTCTCTTCAATT CGAATTTCTTCCGTAATTCGATCTAAAATATTGNGGCCTGAAAGTCATAT TGTAGGCCCTACACTCTACCTTCAACTCTCTTCAATTCGATTTCTTCTGT AATTCGatctaaaatattggtcccctcagttTTAATATGGTATAAATTAC TCTCCTAAtatttattcgaatctttctctaattcgattaaATCTTATCGt gccttgaagatcgaattagagagagttaaaTTCGTAAATCTTTTGGACAA TACCAAGTAACTTTTTCTGTTAGCGATCACGAAATGTTTCGTTGTCTTTT AAGGTCAACACAACTTTGGTGAAGATGTTGCTTTTCCTGCTTTTGATCCT TCCACATGTCGCTGGTAAGTTTCACTTTCACGTCATTCATCAcccattct cacagacccactgggaacccttcccactggaaaaattagccaaaatatcg tccccaatGGAAAATTACACTCTATTtcttgtccccgctgaaaataatca gataagcaaatcctcatcGTAAAATagtgtgctattttttccatccccac tgaattttctggcttgaaagcaataaaattcaaatccaGGCCAGATGTTC TATAAGGAGTTGAGAGGATTTCTGaataaaccaaggaaaatgtTTTGGGA GTGACGATCTCAAAAAGTCTGGGACCCAAAtttaatttcatattttcatt gattttctttctaatTTTACAGAGCCATTGCTTTCAAATTACCTGCAAGG AGACTCATCTTCACGTGCTCTTCCCGTGCAAATGGATATGGCTTCAGGTC AGTATTTTGGCGTGTaccaaaaaggaaaaataaaaacagaaaaaccaTTG GAAAATTTTATCTTTCAGTCATCCAAGAATACCTgcacaattttgattta aaggttttgcttttaaataagagcgatatcatttgcttacccatcaattt taatttacaagctttttgatattgaattgacacggatgtggagcaagatt ggtcagaaagaagagtaaggaaaaacaatttttttgcttatatcagcaca atatgacaataggcagacactgttctgatatgaaatatgtgtctgatatg aaatgggaacacttatctaaaaataaaacctttaactctCTTCTCCAGTA ATTGTCATTAAATCCTTAACTTCCAAAAGTTTAGACTAAAAACCATGCTC CAAAATAATCCTTTCCACCTTCAATATTCTAGAGGCTGGTATCACAATCT GCACTGGTCAAACGCGAACAATTTCATGTCGTGATGGAGCCAACATGGCG GTCACCAATGCATTCTGGGGCAGGATTTCGGACAAAGTGTGTCCATCCGA TGATGGTGACCCGGTGACGGATTGTATCGGGTCACGTGACACGTTACCAT TGGTGAGAAAGAAATGCGAAGGAAAGAAAGAATGCAAACTGTCCGCTAGA CACAGGTGAGAATAATCATGCGTTATTTATTGGACAGTCTTCTGGGGGGG GAGAttagacagacagacagatatACACCTTCCCATAGTGGGAATAGGCC CTAACTTAATCTAGAGATCACTGCAAAACAATGGAAGTATTTGGTGGCAA AAATTACAATATAAAGCCTTAGGGTAAACAAAATTTACCATAAGCTCACC AAAAAGTCCATCtagtacccagagccacttgaTTCTACTTATGGAAGTGA TACAGTTGAGAAAGAAGCTAACTTAGGGACTGGTTTCGAGTTTGCAAAAA CGCATCTTTGAATAAAGCTGATGTAGCAGAGAATTTACTGAGAAATGCAA ATATCAAGATATTTTGTTACATACTTGCGTAGTTTTAGTGGCTGACATCT AcccagtagcgtagccaagaggggcacAAAAATTGTTTATGAGAGCAGGT TTTTATGCTattataattatcttttaaaaccatgaatagataattacagt gtcataagaatctgctctcctacacaatttttgcgcccctcttggctacg tTACTGTCTGCCTGATTCAACTTGACTACTCATACCTTTTTTTCATTGAG TTTAGggccccgaaggggctagagatgAATATACAACCTTTCTCAAACaa taaaaagtgaagccttaagttgTCCCcgcattttaaaaattttgtttgaa aaacacactagactagtctaagacgagtttcatctaagaggaacaaacgt gaagacgggagtTTTTCGGGGGTAGCCGTTGTAGACTCTATTTTCCGCCg cgcaacatattacgttttaggatatacaaactatgttatatcatgaTAAT ATAtcatacggacgatagcatcgtctaaaaACACACACGCGTGTTCTGAA TGGGAAAAATAATTGGCTTCTTTTCCCAGCCGGGAGTTTCGAATCTAGCC CCTTTGGAGCTTTTAACATCAATGCTTTTTCTTTTCCAGAGAATTACAAA ACCAGGGATCGAGCCATTGCGCAGGCGTACAAAAATACTTGGTTGTGAAC TACACGTGCGAACCAGAATCTCAAGGAGTGACTTTGTGTGATTCCGTAGA AACCGACCTTTTCTGCAGAGCAGGATGGAATATGGAGTTGGCTGATGTCT TCTGGGGTAGAAGGTAGGAGGAATAGCCTTAGTATTCGGTGATTTCGTTA ATTATAatgtacatgtttttctttttataagcataacgcttataagcata tgaaggctcagatttgcagattttttaagcaatacatgaaaatatttaat ctgaaatatttttcaagtcattaatttttttctgatcaaAAAGGTTTAAA AGTGGTCTTAAACAAAAAGACATTCCAGGGATagccacattccactgctc ccaaaatctggaCGCTGTTTGAAtcaaaatgtttacaaaatttctgagat tttgcaaaatttggctcggggtgaattaTAAACATTataattcataagca tataataagcatacgCTATGTctaaattctttgaaaacttaagcataCAT GAGCCTAACCAAGGGGCAGACacttcccagctgacacacaacgttctttc aacgttcatctaacgttatatggacgttgtgaacgttaggtaaagggggg gtttcatggttggcggaggagcggaatcggcccttttttcggacggagtg gcggaatttggcgaaaatttagacggaattacggaaattgggNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatt agacaattttagtgcggaaaaacggaatttagcaaaaaaatttgcggaat ttcggaattggtaaaagattttcaaaatttgcggaattttcgacaaaaat atcaagagggtctgtttCCATATGGTTTAACATCGAATACCATAGCATGG TGCTACCCCCATTCTCTTTGGTATAATATGAGTATCATTGGTTGGCTTTT ATTGATCAGTGTCATTTGACCCAAGTGCGGTAACTGAGAATAGAGTAAAA ACGTTCCTCATTTTTACACTGAACGAGTGTGAAACTATCAGTGAAACCAC TTAGGCTTGGTTGTAAATCCTTAATTACGAATCTTTTTTATCATGATATA AACCTTAAATTCTTCTCCACTTTAGAGCGAGCGCCAAGATGTGTGGCGGG GATGGTGAGATCGAATGCGACGCCTCTGAGTCCGCCTCCACATTTCTCAA GAACAAATGTAACGGACAAAACAGATGTCATATCAAGGCTGATGCGGACT CACTGGACCCCAAAACTCATTCTTCATGTAATGGCATCTTGAAATATTTA ATGGTGAATTATGTGTGCAAACCACAAGAACACTCTAATGATGAAAGTAA GTGTTTTACCAGAAATCACTcgcaccactttttgatttcactgatataat caaaatatattatggtcaaaatctattgagaatttatcttttttcctcgt ctttcaaaatttggagttcgggcgagaaagtcgatttcgggccatctctc aaatttaatcggataattcaattcgggaggggtttatagagcCCCATGCT ATATTCTGAGTCCTACTGGACAATTCTTAAgaacttttgaatcctcagat ACTAAGGTCGTCTTAAGTCTATTGTGAAAACTCTTAGAacacttccaaat cgtttgtggttttgaaaattcgtaggaattttccttttttctaaaatatt acgaccatgattgtagaaagTTACTACAGTCCTTTTGTGAGTGCTATTAG AATCATAAAAAGCGAGCTAAGGAACTGGGGCGAGTTTGATTTCAACCTTA TGATGAAATCATCCCTTTAAAACCAAATGTCAGTTGTTAACAAATATATA GTCTTCATAACTCAGGAACAAACTTGTATTCCTTACTGTGCGTATTAAGC TATGTATTTTACTGTGTCTTCATCGAAAGCTTTCCCCAAAATAATGTCTT GCTGTCTCCAGTTTCATAGCCTACTACTACTTAACAAGGGGGGACAGCTG TTTTATCCTATCTTGTTTGGAAATTTCGAGATATTCGTCAACATAATAca gttatttttttgaaattttagttttCTAGTCAGATGCTGAGAAAGTTGTT CGGTTGAAGCGATTATATTCGTTAGGTCTGACTAGACACGAGTCTACTTT GCACTTTCCTCTTCTCTTTTTGGAACTGAGGTGGCGTTCTAAGGCCGAAT ATCCCTAAGTGTCGCTTCAAATGTGAAGAAGGAAGGTGGAATtctcattt tttctttcaactGTCAAGCTTATTGCATAAGGTTTTCTGCTGGTTTTTTA TGCCAATTAAGGAAATTAGAAGACGACTGGATGTATGTACaaaagtttca agtcctcacgacCACCCAGTCCGACGCTAGGGGAGGGGggtctttacggt cccgtacggGTCCTTTACGGCATGGAAATTAGGTCTACAAAATAGATCTT ACAGTGGCTTTTAGTACACAACCGACCATGGTAGTGACTTTTTGAAAGAT TATTCGTCCTATAAATGCCTCATATGGTAATAATGGTCGAAAAACGGTCT CTTTACacccttttcattttttacttcaCAGCAGAGAGCGAAGAAGAGAT GAAAGACGAGACGTCCAAAGAATTGATGGGGATGCTGAACAAACAGAAAA ATGCTGCTGCCAAGTCTTCAAccaaaaaaatctctaagaaagaagaagta GCTGAGGAGCCTACTCAACAACATTCTCTCATTATTAACGAAGATTCACT CTCCTCTTCACCACACGCTAAAACAGTCACAGGAGAAGCGCGCACACAAA TCGCTGAGTCAGCAAACACGTCACAAAAGGAGGATAAAGTCGAGGTTTCA GAGCCAAACACAGTTCGCTCAATCCTCGATCGCGCTAAAgaagttttaaa aacattagATTATGATGGAAGTAGTTCCAGTGAGATTTCAAAACGTGGCG GTATCATGAGGAGCGCCCCTGCGCCCTCCAGCCGCCAATTTGTTAATGAT ACAGCAAAGGCGGTAAAACAAGTGGCCGCCCTCGCTCAAACCTTGGTCAA ACACGCTGAAGCAAAAGcattattgaaaaacaaaaacaaaagccaGTTGA CCACGAAGAAAGATAACACAAAAATGACACCGACAAAGAGAGGGTTCATA GCGCCTGAACCTGGACAATTCGGAAACACACCTTAAGcttgatacacctt ttcgactgtagtcGCGCAGTCAGGCGCGTgcaactttattatttaatttt ccAACCTAagctcgatccaatccttttttNGCCAATTTGTTAATGATACA GCAAAGGCGGTAAAACAAGTGGCCGCCCTCGCTCAAACCTTAGTTAAACA CGCTGAAGCCAAAGcattattgaaaaacaaaaacaaaagccaGTTGACCA CGAAGAAAGATAACACAAAAATGACACCGACAAAGAGAGGCTTCATAGCG CCTGAACCTGGACAGTTCGGAAACACACCTTAAGcttgatacaccttttc gactgtagtcgcgcggtcaggcgcgtgcaactttattatttaatttacca acCTAagctcgatccaatcctttttttacactatttactattgtctttag gtgtgaaaaaagactgggacggtttaagGTTGGTagaacggacaaaaaaa tgcccgcgcggcaattggcggctacggtcgaaaaggtgtatttagtGCAA ACAATGTGACTAGGTTACAGACAAGCTACAAGGgacatctttggttaaaa taAATCACGCTCATCTGAACGCCTGACAAACCAGCAGAAACTCTCAAATG ATAAAAACATTAGAAGAAGACTTTTCAGAAGCctataaataaaaattcat gtaaatttattttttaaacagaCTTAAGAACAATAGATAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067076TCONS_00067076Clytia hemisphaericatranscript
TCONS_00067077TCONS_00067077Clytia hemisphaericatranscript
TCONS_00067078TCONS_00067078Clytia hemisphaericatranscript
TCONS_00067079TCONS_00067079Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067076-proteinTCONS_00067076-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_463supercontigscaffold_463:102030..110720 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.02 tpm) - - (62.92 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.04 0.07 0.09 0.03 0.13 25.56 29.16 13.86 11.45 16.26 13.92 38.98 35.61 25.53 62.92 41.27 37.28 0.25 0.2 20.83 20.27 16.85 14.37 26.99 31.7 2.86 1.13 0.04 0.14