TCONS_00067076-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067076-protein
Unique NameTCONS_00067076-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length445

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067076-protein ID=TCONS_00067076-protein|Name=TCONS_00067076-protein|organism=Clytia hemisphaerica|type=polypeptide|length=445bp
MLLFLLLILPHVAEPLLSNYLQGDSSSRALPVQMDMASEAGITICTGQTR
TISCRDGANMAVTNAFWGRISDKVCPSDDGDPVTDCIGSRDTLPLVRKKC
EGKKECKLSARHRELQNQGSSHCAGVQKYLVVNYTCEPESQGVTLCDSVE
TDLFCRAGWNMELADVFWGRRASAKMCGGDGEIECDASESASTFLKNKCN
GQNRCHIKADADSLDPKTHSSCNGILKYLMVNYVCKPQEHSNDETESEEE
MKDETSKELMGMLNKQKNAAAKSSTKKISKKEEVAEEPTQQHSLIINEDS
LSSSPHAKTVTGEARTQIAESANTSQKEDKVEVSEPNTVRSILDRAKEVL
KTLDYDGSSSSEISKRGGIMRSAPAPSSRQFVNDTAKAVKQVAALAQTLV
KHAEAKALLKNKNKSQLTTKKDNTKMTPTKRGFIAPEPGQFGNTP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041913XLOC_041913Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067076TCONS_00067076Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000922Lectin_gal-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030246 carbohydrate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400Score = 11.478Score = 10.599Score = SequencePF02140PS50228PS50228mobidb-litemobidb-litemobidb-lite
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000922D-galactoside/L-rhamnose binding SUEL lectin domainPFAMPF02140Gal_Lectincoord: 153..235
e-value: 3.9E-12
score: 46.3
coord: 52..136
e-value: 3.0E-15
score: 56.3
IPR000922D-galactoside/L-rhamnose binding SUEL lectin domainPROSITEPS50228SUEL_LECTINcoord: 44..137
score: 11.478
IPR000922D-galactoside/L-rhamnose binding SUEL lectin domainPROSITEPS50228SUEL_LECTINcoord: 145..236
score: 10.599
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 409..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..378

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067076-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350400Sequence
Match NameE-valueIdentityDescription
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