XLOC_041613 (gene) - C. hemisphaerica

Overview
NameXLOC_041613
Unique NameXLOC_041613
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_456:429409..440666+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041613 ID=XLOC_041613|Name=XLOC_041613|organism=Clytia hemisphaerica|type=gene|length=11258bp|location=Sequence derived from alignment at scaffold_456:429409..440666+ (Clytia hemisphaerica)
ATTGTCTGATCACAAGCAGCACGCGAGGTTCAAACACTGTATTAAAGATG AATAAAGTTTATTTGACATGGTTTGTTTTACTCCTTGGGTTATGCCTGAC TCAAGTTGAAGCAAGAAGGTATGATCGATTTCAATTTTCATAAGTAATGA TATGATATGTTATCACATGTAAAACATTGGATATCAATATAAAAACTAAT TTCCAAGCAAATTCTGATACTCAGATCAATGAAGtataaacccgaagggc tagaatcgaatctttaaCTATTCTAaggcaagaaaaaatgaagccttaaa atatgcgccgtatttttgacgatacggattgaatctagcgatttctttgt tttcgagtgatatcttTCGAAAATTAGGTGTAAAtcttagtttcaatctg tcatttgtgttaAAACCAGGCACAGGCTTCAAATCCTATCAAAGAGAGTC GATTCTAGCATTTCGGGCTTATAATTCATTGGCTCAGTaaactagcaagc gtctgtctttccttggacacaggaacgcgggaataatgcttataataaag agttcttataaaaaatagaaatttccgcgggagagtggattggaaagacA TATCCAGTGAACATATAGACATAGAGCCCAttgcaagtttaatctgcagc gaaatacaacgacgtgctTTACTAGTCTATTGGCTCAGACGCATAGCACG TTTCACTGTAATGGCGTGCGGAGTgctttgaattttttatcaagTTTCTG GATGAATATTAAAGATAAAACAGCTTTTGCGGTTGCCTAAAGCAAACCAC TCGCATGAAAATCAAAACTTAAATGTTCAGCAACACCTACCCAGGCTAGG CTAGACAACACCAACTCTCCTAGTCAGGCTACACTCAATACTGTTCTCgc ctctttttgaaaatttttgtcagcTCCACTCCAAACCTAGACTATGTTac agtctaagacgaatcactatctaagaaaaaagcccaaagccgaagaaaat tctcTTCAAACATAGTACCCGGGCAGTAACTTTCAGCACTCTTTGATTTA CTGACGTGATGTAAATTTTCGTGGGAACTATtaaagaatcataaaaaagt ggaCCGAGACCAAATTTGATTTCCCAGTTTCATGATGCGGGAGTGGCACT AGCTTTCATGAGCGCTATCAGAGTCCATTCAATAAGTTAACAATTCCAAA TGCTTCTTTTAGCATAAAAAAGATCGAGACGGTTGGACCATCGAATAATT CATGCTGGGATTATTTTATGCTTGTTCAAAGATGGCCCTATTCAACATGT CAAATTGTTAATGTGAGTAATTTTGTCTATTCCGACATACTCGATTCTCT CCTATTTTTGATGGTTCTGGATTTTGTCTCTCAAAAGAGAACTTTCTGGG AAAATCTGGACAAGGGTTGAACCTGGtaccacagatttctgtaaagtccg aagggctggatggagtgctttaagctcttccaagcaaaaaaaagtgaata tcgcaaaaaatattgctgctattgttttcgaaaacccgtgaAGCTTGTTA TTgatcaagcgctgaaattctatcgTAAtttcacgtgacctaggtaggat ttcctaaaTAACCTCGGCacattttcagccaaagcacgacattaTAAATC TATGCCTAGTACCCCCTCCTTCGAGCATTGTCGTGCCGTGATAATTATGA AACCAATCACAAACCACTTCAAAGCCAAACCTTCCACtccaatgaaaatt ttaaacacttGTTCTTAATTAAGGGGTTTTTATAATGAGACCAACTGTCA ATCTTGTTTGGAAAGCCTATAGAAATCAAAgatagtttgattcagtcact aggataaatctgataTGGTAAATTGAGACTGAATAACTAtaccaaggcaa acttaaaatccgcaattatagaaaatctttaaaacgcCGAAAAAGCTATA CTGCAATTAGCCGTGTGTCCGGGCTTAGTTAGCTAGGCTAATAAACTCCC CTCTAGCACTAGACTAGTTTCTTACTTATTCTGAATTCCTAGGTCTAAGC CcaaaaaaaaggtctatcgaatCATTGAGATAAGGTTGTGACTTGATACA CTTTTAAATGTATTATTTATAGGCATCTGGCAGTCCTTGCTTGATCCCAG AAAGGATTCATTCATGGACACTTCATGGTTTATGGCCTGATAACATCAAC ACATACCCAACTCATTGTGGAAACGAAACTTTCgacaacaaaaaaattga agtaaGTTTATTTATAGTGACGAAATGAATAaatcaatcctcactgcaaa atattatactATCTTTCCCATCTTCACTGAAtgttctgacttgaaaacaa tagattttaaATCCCCAcccataaaaaatatggtaataacaatccccatc gagtttcagtacgtcatttttacccccactagctgaaaaaatcctactgg gtctgtgagaagggaatgTCTGAATTGTTTTATTAATTTTACGGAAATAA TACCAGCTAGCACAAAAACgttgttaaaaaaattaacaGATAGCACAAAT GAAGTTTGACCAAAGATCTATTTAAGATATAACAACCACAATCTCGACCA AAACATCACAATGAcgtcaacaaatcaaaaaaacacTCCCAATCCACTCT GCACGCCCACATCATGTGCTGACGATCAGAACAAAGAAAGCCTGGCTTGT TCCAAATGCAACCGACTCGTTCACTACATCTGTACAAGGTTACCTCCTTA TATGATATCGGTATGTAAAGATGGCAGAAGAAATGGCTGCAATTATATTT GTCCAAATTGTGTGGTTGTATCAAGAGATCTGATGGCTATCAATCCTGGA CCTAGGCAATCAATAAAAACGGCTGCCGAACTTGCTAAACTAAAGGAGAC GATAAAAGAGAATGAGAAAATGATCAAGACGTTGAAAAACACAGAACACC ACCTTCTGGAGATAGTACCGGGttacccacgaaaaagttcagacgtttcc cgacatcttgaggccgaacaaatgtcccaaagtgcttggagttttgatat ttagaaagtagatatccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNTGCAGTTTGAGGAAGCTTGTACTTTCGAAGTCCGTCTCGC CGACAGAGATTTGTTAGCTTTTGCATGTCTCTATCGTAGCCCAACGAAAA CAGATTCATCTGAAGAAAACAATATGCAAAGCTCAACTCGTTCATGAAGA CTATTGCCGCAGACAAGAAATACTCTCACAAATGTTTGATTGGTGATTTC AATTTCCCAacaattaagggctctgaccatagtgaatttttcataattgc cgtgtttaaaatgtattttctgactgatgtaaccaacaaaactatggtat GTTANgtatctactttctaaatatctaaactccaagcactttaggacatt tgttcggcctcaagacgtcgacaAACGTCTGagctttttcgtgggtcacc cggtagagtctcaaaaagaagaaatttcagaCTTAAAGAAACAGCTGTCT AAAGATCCAGCATTCCATACCGTGGAATACGTAGAAAATAAGCTGGAGAA AAAACTGGAGGATTTTCGTACACAGATTCTTTCCACCATCAAAGAGGAGT GTACGAAATCGTACGAAGCTGCAGTAACTGCCAATAGAGAGACTCTCTCA TCCAACGAATGTATTAAGACTGCCGTTAAAGAAGTACATGAAGAAGAAGA GGCAGAACAAAGAGAGAAAGTAAAAAGATCGAAAAACATCATAATCCACG GGGCTGAAGAACCAGCTGAAGATGCACCCAAGTANGTAAATGCTTCTTta tctcgaaatcttcaaaacagTGGTttatcatcaatttttcatctggattt tgcttaaaaaaacagtcataacttttgacacatctttttagaaaaatttt ccacaaaatttaaaatagtNCTGAAGAGTATGTGAAGACGCTCATTCAAA ACCTCCGGGCATCAAACAATTGTTTAGACTTGGTTCGAAATCTGAAGGAA AGACTCGTCCAAACTGGTAACATTGGGTAGcgagaaagaaaaagagaacA TCTTTGGGAACCTCACCGCTCTCAAGGGAAACAACACGTACAAAGGAATG AGTGTATGTGAAGacctgactccagatcagaggAAAAAGTATAAAGACCT GGTTGCACAAGCAAAAGACTTGAACGAAAATAACAAAGGGAAAACAGATG GAATATTTAGAGTCCGTGGGTCTTCAAAAAACGGGTTTGGCATCAGGAAG GTGAAGGCCTCCAACCTTCAACAACACCAATAAATGCAACTGGTAAAAAc aacgaaaaagaagaaaaattcgaaaacaaTAACGAAATACAACAAAagcg aaaaaagaaaaaaatcgacAACATTCCACTGAATCGTATGGTGTCCAACA AAtccaaagagaaaaagaaacttGTGGATGACATAAAAATCATGTATGCC AACGCAGACCAACTTACACCTGAGAAGATAAACGAACTACAAATCCACGC GCAGAAAGAGAAGCCGCATATCATTGCAATCTGTGAAGTCAAAACAAAGG TAGGTGGGCTAAAACGCATACACGAATACGAATTCTGCGAGTACACACTA GTCAACCATACAAATGCAGNaattctttgttaaaaatgttaaggaacctg aaatataacttttatggtcaaataccaaaatcaatttgtggactatggtc agagcccttaactggGAAAATTGGACCACACCGCACATCGAGCAGAGTAA GGAAGTGCATTTTCTAGATGCAATCCGTGACTCCTTTCTACATCAACACG TGAATGAGCCAACACGTTGTCGAGGAACTGATGACCCATCTACGATTGAT TTAATCTTCACGGGCGAGGAGAATCAAATATGTGACTTACAATATCTAAN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTC AAAGCGATACGTCTTCAACGATGGTAATTATGCTGCAATGAAACAGTCTC TTGTAGCACATCAATGGCAAGAGGGATTACTCAATGCAATGGACATAAAA TCTGTAGAGGAAATTTGGGaatcatttaaaaacaaattattaGAGCTTAG AAATCAATTTGTTCCATTGAAAGAATTTGATTGTCAGAGCTGGAGGAGCA AGGGGTCTATACCCATTAGGAAATGATCTTCAAAGAGAAGTAAGCGAAAA AAATCGATTGCACAGAAAATGGGCCCGAGCCTTGTGTCCAGAGGAAAAGA GTCGCTATCGGCTTACATATGTTACATCACGTAACAGGGTAAATCGGATG ATGTCGCAAGCACATAGAACATACGAACGAAACATATGCACTAAAGCCAA AACGAAACCAAAGGTCTTTTGGTCGCATGTAAGAAGTAAGATGAAAGCTG CGACAGGTGTTTCGTCACTTCTCGAGTCACCTAAAGACAAGTCATCACTA CGTCACGAAGACTACGAGAAAGCAAACATTCTCCAAAAACAATTCTGCAG TGCCTTTACCATCAAGCCTGAGTGAGAACTTCCGGAATTTCCACGAAGAA CAGAACAAGATATTGCAGACATCATTATAACTAAAGATATGATAAGTAAG AAGATCAAAGATCTGGATACAAACAAATCTTTTGGTCCTGATGAAATACA TCCAAGAATGTTGAAAGAACTTGTCGACGNGCTGGGTCTACAGTGAAATT GACAAAATCCATAAATACAAGCACTATTTGGCCATCAAACATTGTAAACA GTGTCTTTAAAATATGGATAAGCATGCAAAACAACACTCAACAGGACTTA TGATGAAGATAAGCAGTATGGCTCCATCAGTAGACGTTCCACTGTTACTC AACTATTGAAATATTTCGACAGGTGCTGCGAAAGTGTATCTGACGGAAAA GTTGTAGACTGCATCTATTTTGATTTCGCTAAAGCATTTGATACCGTGCC TCATCGTAGGATTTCATCGTTTCTGAGTGGAAGGAAGCAGTTGGTCAAAG TAAACCAATCAAAATCCAACGTAGATAGTGTATTAAGTGTAATACCACAA GGAAGTGTCTTGGGCCCTCTACTCTTTGTACTGTACATAAATGATCTGCC TGACAAGGTGATTTCGGATCTGCTACTTTTCACAGATGATACAAAGATCT TCAAAGAGGTAGTTTCAGTCCATTACTCCCTTGCCATACAAAGTGATATA GACACACTCGAAAAATGGTCCATTGATTGGCTATTACAGTTCCATCCGGA TAAATGTCACGTTCTTACAATCGGCAAATTCGTAAATATAAAACACGCTC ATCCGTATCGTCTTGATGATATTCAGCTGCACGTATTTGAACAAAAAGAC CTGGGTATATTGGTTGATGCTGAATTGACATTTGAAGACCATATAGccaa tcaagtaaaaaaagccAACTCAATGCTTGGTGNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNGGAGTGCAAAGACGTGCAACAAGATTGGTC CCAACGTACCGCAGCCTTTCATATAGTGATAGGCTCAAAATTCTCGGCTT ACCAACACTCGAATTTCGAAGACGATTATGTGATATGGTACAGGTTTACA AACACCTCCACTACTACGATAAAACAACAATACCTGACAAGTTGACTAAA CGTCCACGTCCAAATCGAAGACACCCCCATGAGCTTCTACCTAACTTCGC AAATTACGGTTTCCACGGACCTCAAACGAAATCCTTTTATTACAGATGTG TGCCAACCTGGAATAGACTGCCGAGAAATGTCGTTTCAGCAAAGTCTATA AAGACCTTCAAAGAAAACCTCAACGATGCATGGGAAAACCACCCCTCAAA ATACGATTCAAGAATAGTGTAAAATAAGATCGGTTAGAGGCCCACTGTGA GCCTAGCTTGTAAATCtgtataataacaataataataataacaatctATT GACACTACAAATCCTCTTCATAAACTACTGAAACCGAGATATTACGATTT GAGATTTCAAATCTTCGTACCACATTGACATTCTATTTTCTTCTCACAAA ATATTtaaacttataaaaacaagtAACCAGCTAAATTTGGAGGTTTGTTC ATACCTTTAAAACTGTCGCCGCCTAGTACTTAAAGTCTTTAAAGTTGTTT AGATGACAGTGTTCTTCGATCTTGTACGTAGAGCCACTTGCACCACATTC TTTTATTTCATTGATGGTTGTGTTTATCAATGAATTGAACTAAAGGACTG GGTTCAAGTCTGAGTTTTCTTTAACCCCTTGTCAGCCAACGAAAGCCCTG TCAAGGAAAAGGCGGAAATTAAATACTCAAAACGGTTCAAGCTTGATCGT ATCAATGATCCCCAATATTGGCAACTAGGTGCGTCTATTTATCCATCACA ACCTTGGGTTTAGAACACTGAACGATAATGATGTGGGTGATTAATACaat tatgtttttgaaatttagggTTTGGAAGAAGAACTTTTGATGAAATGGCC AAACCTTTACGAAGAAGAAACAGTGGACAGCTTGTGGTAAGGCTATATAT CAATTTGTTATAAGACAAATTAAACAGACTTTAGACGATGTTATGGTCGA TATCGATGTTATGTTACGGACGAAAAGCTTTATTGTGCACAAGTACGGTG CTGGAGACTGAATTCGTTCATGACTGTAGAAAAGTCCAAACCGCCAAAGC TATCCAACTCACAAAGATATTCCGCCACAGAGATAGCAGGGTTATGTtat taaaaatttcttatttttgtctagaaaaaacattttgatgaaattttgaa aaagattacatcaaaatttcaaattaagaCCATTGTAATCAGTTtctaat tcttttttaattttaggtacattaaaggaaaaaattttggcgggagttta atttggcggatgaccgaaaaagttttttcagagggaatttaatttggcgg ttaacttgaagaattaaatttggcgTGAATTTAACTTGGCGGACGAAGGA CATTTATGTccaaaaaacgccattaaaaaaggaaaaacctgtTTAAAGCC TGCAATAGCATacatttgggggaataaatagagcaacttaaattttgccg gaatttaatttggcggatgacggaaaaaattaaatctaaattaaatttta aattttcttcccagctaaatttcttcctttcatgTATCTCATCGTCATAT CCAATGATAGTCTGCTGATTTCAAATACTCTAACTGACCATCCGCCATTT ATGTAGGCTTCACGCACCCCCTCTGGTATGATTTGATATATAACAAAATA TATTCTGGGGATGTGCGCAGCCTACCTTTTATGGAGTTGCTTACTCCACA ATACCACAATTTCATTGATTTCACTATAACAACATTaattaacaaagata ttactGCAGAATCTTCAGCGTTCAGCACcagtattttccttttttacaGG AAACACGAATTTGAAAAGCACGGCACATGCGCACAAAGTCTTGAAAGTTT CAAAGAACAAAGAAGTTACTTCACAAATACTTTAGCTTATTTTGATAAAT GGAACGTCGCTGAGTAAGTTAATTACCCTTTTCAGCTGTGTACTTTCTGA GaaaaaattctgaattttcaaGATCTCTTGGATTGAATGCACACTACTAT CAACAATCTAAAATCTCCAACTTTTAAATGTGAAATGAAGCTCAAATTGG ACAACATTAGccaaaaaatttacaataaaaatgatTACGACAAACTTGAC CTTCTCAAGCATTATACGACTTTCACTTACATTACAATAAAGAACTTcta ctttgtttttgtttcagtGTTCTTGCTCAACAAGGAATCTTACCTAGAAT CATTCCATACAAGGTATTGAAATTGAACGttttcttaactcgaacctttA TGACTCAAATGTATCCtttactcaaataatttttctcgtcccttcagtta acaatgcctaaaacttactccataactcgaaatttccttaagtcgaacaa atttgtgttgcTCTGTGGAGATTAGAGTTATCGAGACTCCACTGTACAAC TAAAATTGCTTTCCTTGCCTTGTTTTTGCCTCTGTTTTTGCTATTTCCTT TTAACcatattgaaaaacttttcgagCTTGCTTTCTCAAAATACCTATCA TGGAATTTAACCACAACCAATTTAACAACAGCAAGTTTACCATCTCTGTT TACATTATTGTCCAGGgggttttctttgtttttggtaggttggctaatga aaaattaaactctggcgatttctagattctaggccggCGAAGTCTTGGCA GTCCTTGGCAAGTGCAGTGTAGTGATTAGCGTAAATATGTACATGAGGCA GCGAACCGAACTTGTCAATTGGTGAATTGTAATTTCTTTCGTGCCTTGGA CCGACGAAATTCGCCGTTCGCCGGGCCTAAATAACACACCTGATTGTCTT TTACTTTGTTCATTAGGCTTCAACTCTGGTTAATGCTATCCAAAAAGGTT ATGACAAGATTGTTTGTCCTGGGTGTGGTCACATCGAGGTAACAAATATA AACTTTctttcttagatttttttcttcatacctTAGGTGCTTTATATATT TCTTAAactaaaacattgaaataagattttaaatttttaacctCCAAAAA CCTTCTTTACTTCTGAGATAAATATTTTCTATGCTCTTTCTCTCTAGCAG GTGTATGACAATTTGAAATCTCCAAAAATTGGTTCTTCCAACCTTAGCCG TTTCTTTAATCGATACCCTtgtctcacagtcccggtggaacttttttctc agttgggataaaaattcctctTGAAATCCTAattaatggggatagaaatt ctattgttccaaagttaaaaaaccCAGTGGAGATGGTTTTGGTGTGCAAT atttaaacatgaaattttgagtcGAGATGAAATCAAACTCGATTTCccaa tggggctgaaattcaagggtatttccccaccggggacgaaatttttgctt cattttccagtggggctggggtcccagcgggtctgtgatacagggagtaa tattgtgattttagaatcgtgaaaaagaaaaatcagggacTGGATACGAG TTTGGTTAAATGTGAAGAAATAACAGAATAATTATTACAAACTCagcaaa atgactttttttcatttttccagggtttTGGACAAATCTTATCTCAAGTA TACATGTGTATCGATCAAGCCGATACATTGGTGAATTGTCCAACATGTGA GAAAGAATGCCACATGGATCAACCTGTGTATTATCAACCAAATCATCCAA AGACCTTTGTAGATCCATCGGTCAATTCAGtttaattttcaactttaaat atttttcttagcaaaaaGTCCTTCCATATAGAGGACAATTTACTTTTATA GTGTGTATCAATACCATATTAATCcttcttttgaaaaaacattcACATTA TTATATCAATTCGTTTCAGCTTTTTAAATATACTATCaatcagaaaaaaa gaagaaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066512TCONS_00066512Clytia hemisphaericatranscript
TCONS_00066513TCONS_00066513Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066512-proteinTCONS_00066512-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:429409..440666 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RNASET2ribonuclease T2 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.35 0.46 0.4 0.78 0.37 0.44 2.27 2.15 13.65 6.56 12.32 17.48 20.35 13.06 109.6 169.84 25.38 22.82 15.13 10.41 0.68 1.33 17.31 15.74 12.52 10.82 5.23 6.4 58.43 34.79