XLOC_041606 (gene) - C. hemisphaerica

Overview
NameXLOC_041606
Unique NameXLOC_041606
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_456:306435..312362+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041606 ID=XLOC_041606|Name=XLOC_041606|organism=Clytia hemisphaerica|type=gene|length=5928bp|location=Sequence derived from alignment at scaffold_456:306435..312362+ (Clytia hemisphaerica)
CATTGTTAAGCtgtaatttaattgaatcaACCATCATTATATTACAATCT GACAGTTTGAGATTTCTAAATGCTAATCAGTAAccattattgattttttt gttatttcaatATGAGCTTACAAAAACAAAAGGCATTTAGTTACTCAGAT CTTTTAATTGATGTCAACTTGTTACTATATtatagaagaagaaaaaaatt gaataaaaatatattgaaaaaattgtcacaTTGAACAACATTTTACATCA ATTCTGGCAAGATATCAATAACTTCAAGCTGTTTGGTGGTATTAATTTCA ACTCAACCCCTATTGCTATTGGTCCACAAAAAcacatcaaataaaaataa taaaaaatatctaATAAAAATGGAACAAGACTCAAAGACCAATTTTTTAT GCAAGATGGGATGTGGTTTTTTCGGAAACTCTTCTTTTGATGGTATGTGT AGTAAATGTTATAAAGACCATCTTAAACGTCAACAACAACCATCACCATC AGCTGGCCGCACTAGCCCTGGAACTGCAGGTTAGTAAAATTTTAGCTTTT AGTTCATTTTATTCGTATGTTATTTTTTAGCTTTGCTTCATATTAAANAA CTGCAGGTTAGTAAAATTTTAGCTTTTAGTTCATTTTATTCGTATGTTAT TTTTCAGCTTTGCTTCATATTAAAGAGTTGACCTTTGAAAATCACATTGT CTTAATTTTGCTAAGGAACTCTTTTAGttgaacttttgcaaaaatttaCT CTCGAGTTTGACAATGATTCATTTTAAGTCATCTTTAGTATACAGATAAC TTATTACATATCACCTATTCTGAGagcatttttttcaataaaattttata agattCAATATTTGAGAGAACTGTCCTCCCAAAGTGAAGTGTTACAGTTG TTTTGAATGTCATAGTTTTGTATTTTCGTCACTTCTTTTCGTAaggattt gttttgttttggcttGTTTAAgtaaattaatgattttttgtgTTGTTAAG ATGGGACatttttctaatcaatagaATGTGATTAGACACGATTGAAACAG TTATTGAATTCTATTCCTACAGTGTGACAGACTTTTAACTGATTTTTATG ATTGTTATTTTGTATTGAAATATTTCTGTTCACagcgatttttttctttc tctcttgCTTACCAGTCACAACATCAATCCACAGCTCAAAAGCCTGAATT TCTTTTAGTTAAAAACAGGAGGTTATATGAATTTTTTCTCTCATCCCACA TCACACAAAATGATTTTCATAATTTATCCTACTATCCTCTTTTTCGTCGT TGATTATGTATACATATTTGAATGAGAAAAGGTTCTGAATAATAGATTAT AAAGCTTAAATATGGGCTAATATCAGAATCGATCGAATCATAGCTTGCTT TCATAATcttaaaaaagaatttattttctaTATCGTTGTATTGTTCTCCA TGGCATTTCTACTTAatattttaaaatctatttAGATACATGAAaagtta ttttattaatttttgattaatatttttacatcaaTAGGATCTATCGGTAG CATTATTGCCAATAGTCTACCTACACCATCACCCAGCCTCCCAACCGAGG TCTCTACAGCTACAACAACTGTTGCCCAGGCAACCCCACCAATCAATATT CCATCATCAAGCACTGGTCTAAGAACACCAGAAAAAGGCCTCGCCTCAGC TTATGTCGAAGAAGATACCTCACCGAACCCAGAATCACCTTTGGGTGAGA GCCTCGATTCAGCATCCCCTGGTAAATTAAAGAAACGAAATCGATGCTAC TCTTGTCGCAAGAAGGTCGGACTTACCGGTAAGTGACATTTTACTTCGTT TGATTGGTACTTATTTTACATGAACCTTCATGTTTATCATAATGGTCAGT TATAAGAAAAAAGTAGTGACAAGTAATATAATGAAAAGTCTTAAAAGATG GTTAACGCACTTGAAACTTTGATTGAGCCCTTCGTAACGTCCTGGTGTTT TAGGAAGGGTTCCGTTaaaagatgacgtcattgataatcatgaatttatt gtgtaaaCAAGGATATCCatgatttaataaaattcatagtttttatgtat ttttttaacttttacacGCAGATTGTTTCACATACAAACAACATCTCTTG TACATTTGAACAAGTGCAGAAGCACGAAACTTTAAGTTATgtacttttat tgaaagaaaactttaaaattttagtttttatgtaTTAATGAAAGCTTTAA ACCGTTGAGCCATTTCACTAGATAAAGAATTTGGACACATATTATCATTT AGACTAGTTAATCATGCGTACACAAGACACAATAGGAATTAATGATAGCA TAGCGCAAATAGCCCTCTCTGATTGAAACAGTTATCTTTGCTTGCTGGCG TGTCAATGTTTACGCTCAATaatgttacacgtttttttttttataagaac gtcaaaaattttcgaagccttcggatgttcttagttttttggatttgaag cctaaaaatgttcttaaaatgttcttNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgagcattttgatgtaatt tcttaagaaattgcatgtttttaagtctccaaagccttagtatgttctta gaatgttcttaaatttttgggcctcgaagccttatgttcttatatagttt gttcttataaaaaaaaaacgtgtatcgacTCTACTATTGAAGATATGATT TATCCAGCTCTGTTATTTGACGATGAAAATCTTGATAAAGcttgtttgtt tttcaaaattctatatTTTGGAAACCAAATCAGCCTTTGCTTGTCAATTG TATATATGAATTTAAATCAATGTTTTGAGTCATGACTTTGTTGATCGATG AAAATCTTTATCTCTATATGAACTAAGAATAAATAGCGACCTCGAAATAC GGCGATATATCGTTTAAGACCGCAAGCAAACCATGTTTTTAGATAAAGAA ACTTGTATATGCATGTTATCTGTCATACAAACAGAAAATTTGTTTGGCAT AGACTTCCCACTTTTTAATCTggtattttcactttttagaGCTCATATCA ACAGTGATTTGAGTGCTTTGTTACCTTAGCAACGAACTAATTCATGTTTA TGCTTTCGTCATAGGTTTCGAATGTCGATGCGGTGGACTTTACTGCGGAA TTCATCGATACTCAGATAAACATAATTGTACTTTCGATTACAAAGCTGAT GCTCGCGAACAACTTACTAAAGCCAATCCAGTCGTCGTTGgagagaaaat caaaaagatttagaaaatatCAGATTGTCGTTTGCCGTAAATGTTGATAC AATGTGCCATAAAAAATAGTAGGAAACAAAATGtgtataaaaaatcttta cgagaggaaaatatatataaaaactttagcaaaaaaatgtgtaaattcCA CGAACTAGATTATCACTATCCTACTATTATTTTTACGTGCATAATAACTT GATTGACCAATGGCGTTTGGAGGAATAAGGAAGGAGGAGAAACGCCTTGT TGTTGTCTTGTCGAGGCTGCGTCAGCGAGATAGCAGTCTCATAGAATAAC CGAATTGACataaaaaaatatcttcaaagattttctttgaaagataGGAC GCTAGATCTTAGGTATGGTAGCTCATACCTAAAAGACGTATTCGAAgttt gttttaaagaaaaaatggttGATTTATTATTGGAGAGGATCGTTTTAATC ATAAAAGAAGATCCATTATAGTAGTCGGTATTTTtattacaatttctttt taaaaatttgtgttttctGTTTGTTGTGATTGATTGATATGATATAACTG GAGAATGGTAGAGACTCTTCccaaaagaatgttttgatcTGTTGATGGCT CGTACGATATTGTCTTGGTTCCCAAATCTTATAACTTTTAGTTTATATTA TTTTGAACCTTTTTTTTTAcgaatttcttttgttgtttttttcatccTTA TCGAATCGTGGGACTTAGCTTGGCTTTTTGTCTTCGAGGGCATTTGACTT TTAGGGGCGTTGTATTAAATGATTTATTCGTGTAATAGAGGTAGTATTTG GTGTTGAACCTTTTCCTAATTGTTTGTTACAATCATTGAGAACCTTCAAT CATTTTGAGCAATAATTTAACCAACCATACCctttcaactttcaaattct ctataAACCATACTTGACTTGTTTGTACCCAAAGCCTCGGAACCTTTTTA GCCCCCTTCCCATCCATTGAGCACCAAAACTTATCATCAAAGCTACAATA TTCTAGTTCCCAGTGTCCATTGTACCTAGTACCCTCCTTGCCCTACCTTG TAAAAAATTGAGGCCATTTCCTGAAAGAGCTATATATTTTGATCAATTAT GATTAATTCACCCCCAACCGGTATCCTTTTTTCCATTGAGCATCACCGTT TTATGAGAGATGCTTCTTATTGActtgttattatttttcattacaATTAT ATTATANGAAAATATCAGATTGTCGTTTGCCGTAAATGTTGATACAATGT GCCATAAAAAATAGTAGGAAACAAAATGtgtataaaaaatctttacgaga ggaaaatatatataaaaactttagcaaaaaaatgtgtaaattcCACGAAC TAGATTATCACTATCCTACTATTATTTTTACGTGCATAATAACTTGATTG ACCAATGGCGTTTGGAGGAATAAGGAAGGAGGAGAAACGCCTTGTTGTTG TCTTGTCGAGGCTGCGTCAGCGAGATAGCAGTCTCATAGAATAACCGAAT TGACataaaaaaatatcttcaaagattttctttgaaagataGGACGCTAG ATCTTAGGTATGGTAGCTCATACCTAAAAGACGTATTCGAAgtttgtttt aaagaaaaaatggttGATTTATTATTGGAGAGGATCGTTTTAATCATAAA AGAAGATCCATTATAGTAGTCGGTATTTTtattacaatttctttttaaaa atttgtgttttctGTTTGTTGTGATTGATTGATATGATATAACTGGAGAA TGGTAGAGACTCTTCccaaaagaatgttttgatcTGTTGATGGCTCGTAC GATATTGTCTTGGTTCCCAAATCTTATAACTTTTAGTTTATATTATTTTG AACCTTTTTTTTTAcgaatttcttttgttgtttttttcatccTTATCGAA TCGTGGGACTTAGCTTGGCTTTTTGTCTTCGAGGGCATTTGACTTTTAGG GGCGTTGTATTAAATGATTTATTCGTGTAATTGAGGTAGTATTTGGTGTT GAACCTTTTCCTAATTGTTTGTTACAATCATTGAGAACCTTCAATCATTT TGAGCGATAATTTAACCAACCATACCctttcaactttcaaattctctaac TTGACTTGTTTGTACTCAAAGCCTCGGAACCTTTTTAGCCCCCTCCCCAT ACAATGAGCACCAAAACTTATCATCAAAGCTACAATATTCTAGTTCCCAG TGTCCATTGTACCTAGTACCCTCCTTGCCCTACCTTGTAAAAATTTGAGG CCATTTCCTGAAAGAGCTACGTATATATAAAGTTTGAcctttttgaatat attttgatcaaaatatgATTGATTCACCCTCAACCGGTATCCTTTTTTCC ATTGAGCATCACCGTTTTATGAGAGATGCTTCTTATTGActtgttattat ttttcattacaATTATATTATACCAGAAAAACAATATGCCATCTTATTAT ATGTCAAGAGAGAAAGTTTGTAAGAAAGTATATATTTTGTCAGCAATTCC TTTATGTTATGTTATATTCCTTTACCTTACCTACCCCTCTATCTTTCCAA TAACTGGGACCTATCCatgtatacgtttttttataaggaaccttaactta gCTCCGAGCCTGGAGTTTCTTATTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066493TCONS_00066493Clytia hemisphaericatranscript
TCONS_00066494TCONS_00066494Clytia hemisphaericatranscript
TCONS_00066495TCONS_00066495Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066495-proteinTCONS_00066495-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:306435..312362 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ZFAND5AN1-type zinc finger protein 5 Homo Sapiens
ZFAND6PREDICTED: AN1-type zinc finger protein 6 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
43.83 42.09 29.87 27.56 124.37 88.53 88.98 100.6 46.4 60.85 52.03 56.4 76.19 62.91 35.87 37.81 68.28 77.41 83.08 118.42 84.51 91.12 53.06 59.98 60.63 74.68 208.71 280.63 170.47 158.25