TCONS_00066495-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066495-protein
Unique NameTCONS_00066495-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length199

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066495-protein ID=TCONS_00066495-protein|Name=TCONS_00066495-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
MEQDSKTNFLCKMGCGFFGNSSFDGMCSKCYKDHLKRQQQPSPSAGRTSP
GTAGSIGSIIANSLPTPSPSLPTEVSTATTTVAQATPPINIPSSSTGLRT
PEKGLASAYVEEDTSPNPESPLGESLDSASPGKLKKRNRCYSCRKKVGLT
GFECRCGGLYCGIHRYSDKHNCTFDYKADAREQLTKANPVVVGEKIKKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041606XLOC_041606Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066495TCONS_00066495Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002653Znf_A20
IPR000058Znf_AN1
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002653Zinc finger, A20-typeSMARTSM00259A20_3coord: 8..32
e-value: 1.1E-5
score: 34.9
IPR002653Zinc finger, A20-typePFAMPF01754zf-A20coord: 10..32
e-value: 2.8E-10
score: 39.8
IPR002653Zinc finger, A20-typePROSITEPS51036ZF_A20coord: 5..39
score: 9.945
IPR000058Zinc finger, AN1-typeSMARTSM00154AN1_Zf_4coord: 140..177
e-value: 5.5E-16
score: 69.1
IPR000058Zinc finger, AN1-typeGENE3D4.10.1110.10coord: 118..196
e-value: 1.9E-22
score: 78.7
IPR000058Zinc finger, AN1-typePFAMPF01428zf-AN1coord: 140..177
e-value: 8.4E-10
score: 38.6
IPR000058Zinc finger, AN1-typePROSITEPS51039ZF_AN1coord: 137..180
score: 12.281
IPR000058Zinc finger, AN1-typeSUPERFAMILY118310AN1-like Zinc fingercoord: 130..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..133
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 10..44

Blast
[Close]
BLAST of TCONS_00066495-protein vs. Swiss-Prot (Human)
Match: ZFAN6 (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 2.372e-51
Identity = 96/211 (45.50%), Postives = 126/211 (59.72%), Query Frame = 0 
Query:    5 SKTNFLCKMGCGFFGNSSFDGMCSKCYKDHLKRQQQPSPSAGRTSPGTAGSIGSIIANSLPTP--SPSLPTEVSTATTTVAQATP-PIN-------------IPSSSTGLRTPEKGLASAYVEEDTSPNPESPLGESLDSASPGKLKKRNRCYSCRKKVGLTGFECRCGGLYCGIHRYSDKHNCTFDYKADAREQLTKANPVVVGEKIKKI 199
            S+   LC  GCGF+GN   +GMCS CYK+HL+RQ   + S GR SP  A S+ S+ + SLP      S+P   S   +T +   P P++             + S+S     PE     A V  DT+  P     +SL+       +K+NRC+ CRKKVGLTGFECRCG +YCG+HRYSD HNC+++YKADA E++ K NPVVVGEKI+KI
Sbjct:    8 SQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQ---NSSNGRISP-PATSVSSL-SESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVS-DTAQQPSEEQSKSLEKPK----QKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208
The following BLAST results are available for this feature:
BLAST of TCONS_00066495-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZFAN62.372e-5145.50AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
back to top