XLOC_041580 (gene) - C. hemisphaerica

Overview
NameXLOC_041580
Unique NameXLOC_041580
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_455:575984..579434-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041580 ID=XLOC_041580|Name=XLOC_041580|organism=Clytia hemisphaerica|type=gene|length=3451bp|location=Sequence derived from alignment at scaffold_455:575984..579434- (Clytia hemisphaerica)
TTTACAGGGATGACATCTGAGGAGTCTGCAGCATTGACATCAGCCATGAA
GAAATCAGGAGATGTTTTGGACTGGCCAGCTGAATGGAAAGATCAAGTAG
TTGATAAACACTCAACAGGTGGAGTGGGTGATAAAATCAGTTTGATTCTA
GCTCCTGCTGTAGCCTCTTGTGGACTAAAGGTATGGAAAACGATCTTGAT
TTATATGTTGAATTGAAATTACTCCTTTCACTATTACGGAAATGAAGATT
GACTTCAACCGCTTTGGACTTTATTGCAGGACACAAAAAAAGATACAAAA
TCAAAATTCTCAAATCCAGAATCGTTGAAGAAGATTCGACCTAATTTTTA
CATGCCTCATTTAATAGATATACTTCCTCAACATTACACAGTACACTTTT
TATGTTTTGTATAATGAATTTAGTGTGATAATGTTATCGAGGTGATTAAA
CGAATATTAAAGTGTACTTGCCAATGCTACGCAGCGATACAACTGAGTGG
TGTTAAGCACCAAAGCCACACCAACCACCCAACTACGTTAAACATCAGTT
AACCTTATCAAATAGAAAAAGAAACTGGAAAAAAAATACCTAAGAAAATT
TATCATTTATTTAGCTACCAATGATATCTGGTCGATCTTTGGGATTCACT
GGAGGAACATTGGACAAATTAGAATCCATCCCAGGATTCAATATCAAATT
CTCACCAGAAGACATCACCAAGGCTTTGGAGACTGCTGGTTGTTGCATCG
TTGGGCAGACGGCAACATTGGTACCTGCAGACAAGATTTTATATTCCATT
CGTGATATCACATCAACTGTTGGCTCATTCCCTTTGATCGCAAGTTCCAT
CGTCTCCAAGAAAGCTGCTGGTATAACAAAAATATACGTTTACTCTCTTT
GAATTTGAAGCGATAACATCTTTACACCCATAAGTTAAGTGAATTTAAAG
TACATAGAAATGGGATGAGAGGAACAAGGATGTCAGTCTTAAGGCTTCGC
CCTTGATCCCAGGACTAACATAATCGACGTTATATCAGGATGTTACTTGA
CGAGTTTTGTAGTCAGCTATCATAATTTATAGCTAGCAGACCAGAAGAGG
CGGTAGTGTGACAGTGATTATCATAAACGAATTCAAGGAAGAATTAGACT
TCTGTGCTCTTTATCTTTAAAAAGCAACTTTAGCAATGGAAAAAATGGCC
TTTTCCCACATGCCATCAACGAACTTAATATAGAAATCAAATGCAAAATG
TGGATTATTGACTGAAAAATCATACACCAGTGTCTGATCTGAGGGGAATT
CAAGATTTATGAAGGAGAGTGTCTCTTTTATCCATACTCCTTATAAGGAA
ATGAATACTCTCCTCCAAAGAATAAATTTTGAACCCCCTCAGATCCACCA
GCTTCATATGTTAAATTGTCTTTTTTTAACTTTTAGAGGGTATCTCAGCG
TTGGTGTTGGACGTTAAATACGGAAGTGGAAGCTACCAAAAAACCCTATT
TCAAGCTGAAGAATTAGCTTCTCTTATGGTAGACATTAGTTGCCAACTTG
GTATCAAAACATCTGCTGTTATCACTCACATGGATCATCCTATTGGAAAG
ATGGTAGGCAATGCTGTGGAAGTCATTGAATCTATTGAATGTTTACAAGG
GAAAGGACCGAATGATCTGATGGAATTGGTCACCACTCAAGGTATTAATA
TAACTGAATATCTATATTAGCCCCTCCCCCCAGCGGTTACCCAGAATNAC
CGAATGATCTGATGGAATTGGTCACCACTCAAGGTATTAATATAACTGAA
TATCTATATTAGCCCCTCCCCCCAGCGGTTACCCAGAATACGCGAATGGG
CTATTTCAGTTACGTGAATGCGTGAAAATTGAAAAACTTTGCTTGAACGG
AAATTGCGTAAATTGCAGAAAAAACATTGCGTGAATGCGTGAATTTGGAG
AAAAAAAATTGCGTGATTGCGTAAATTGAAGGACGTCTGGGTGGCCCCTA
TATCCCCCTATATCAAATGCTTAGCAAGATTTTTGAACTTGCAATTACAA
TATCAACAAATTGCTCACTTCTAAGTTAAAGTTTGAAAGGAAATCGCCAC
AAACCGAATTCAATTCATGTTTGTCATGTTTTGGCCACGCTGTCAGAAAT
ATTTGTGGTATGTGTGTTATAAGGCTATTGGGTATCATGTAGCAAATTNT
TTGGCCACGCTGTCATAAATATTTGTGGTATGTGTGTTATAAGGCTATTG
GGTATCATGTAGCAAATTTATAGAGCTACTTCTATAGAGAACAAAGGCTT
TTTTAATTGAAACAACAATGGTGCAGTGATTTGTTTTCTGTTCGTTTCCA
GGTGGAGTTCTCTTATATCTGAAAGGAATTTGCGAGAGCCCTGAAAAAGG
AAAGGAGGAGATAGAACGACGAATTAAGAATGGAGACGCGTTAAAAAAAT
TTGAAGAGATGGCCATCGTACAAGGTGTTGATAAAACTGTTGCTGAGAAT
CTCTGTAAAGNGTTAAAAACATTTGAAGAGATGGCCATCATACAAGGTGT
TGAAAAAACTGTCGCTGAGAATCTCTGTAAAAATCCTTATTCCGTTCTCT
CGTTATCATCAAACAATACTATTCTACATGCATCATCTTCAGGTTTCATT
TCTGATATGAAGGCTATTTCGTTTGGAGAAGTATCTTCAAGATTAGGTAA
TGGACGTCAAGTTCCAACCGATGACGTCACTTACGATACCGGAATACAGA
TTCTCCGACACGTCGGTGACGAAGTTAAGTCAGGCGACCCCATACTGAAA
GTATACCATAAAGAAAAGACACTAGATGCAGGTTTCAAGAGTAAACTTGA
ACAAGCTGTCACTGTTTCATCTACCAAACCAAAGCCTAGAAATCGTGTCG
AGAAGGTTATTCATCGTTCTTCTTCGTCAAGTCGTATTTTTATGGTGTCA
CAATAGAGAGTAATTACATTGTGTTTTTGATGTGAAAAAACCTTAACGTC
AAATCAAATTCCATTGAAACAACTCTGTTTTATCGATCCGAAACCTTGTT
CTTAAAACTGAATCGGACCATTGGGAATAGAGAAGGTTTTTTGTAAGGAT
GTTAGAGTCAAGATAAAAAAATGTGATTTGAAATATTTTTAATATTTTTA
ATATTTTTGTATTTTTGATTTTTTTTTGTATTTTTGAATAGGGGACCCAA
AAAGACTGGAAACTAGAGCAAATGGTTTTCTTCGTTCTGAGATCACAGCT
TGTTATTTCAAAGAATAATATTAAGACGTCAAACTCATTGTAAGTTTTTG
AGATTGCAAACGGTGGTTCTAGTCACGTGACCTCGGTTAGAAAATTCAAC
CAAGAAGCGACTCTATATCAAGATGGGATTATATTATTATTGCTCAACGA
AAGGTTAATCTAGGAGCGATGAAGTACATTTTCAATATACACAGCTTTAA
G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066467TCONS_00066467Clytia hemisphaericatranscript
TCONS_00066466TCONS_00066466Clytia hemisphaericatranscript
TCONS_00066465TCONS_00066465Clytia hemisphaericatranscript
TCONS_00066464TCONS_00066464Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066466-proteinTCONS_00066466-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:575984..579434 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.35	12.97	11.47	13.47	68.12	50.9	58.51	59.41	22.67	26.12	10.35	12.52	35.49	42.06	44.89	45.51	21.59	17.52	12.49	9.41	9.59	9.54	14.32	14.18	0.83	0.9	6.96	10.44	18.67	12.7