Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00066466-protein ID=TCONS_00066466-protein|Name=TCONS_00066466-protein|organism=Clytia hemisphaerica|type=polypeptide|length=407bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term Definition
GO:0006213 pyrimidine nucleoside metabolic process GO:0008152 metabolic process GO:0006206 pyrimidine nucleobase metabolic process
Vocabulary: Molecular Function
Term Definition
GO:0016763 transferase activity, transferring pentosyl groups GO:0016757 transferase activity, transferring glycosyl groups GO:0004645 phosphorylase activity GO:0016154 pyrimidine-nucleoside phosphorylase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0008152 metabolic process
biological_process
GO:0006206 pyrimidine nucleobase metabolic process
biological_process
GO:0006213 pyrimidine nucleoside metabolic process
molecular_function
GO:0004645 phosphorylase activity
molecular_function
GO:0016154 pyrimidine-nucleoside phosphorylase activity
molecular_function
GO:0016757 transferase activity, transferring glycosyl groups
molecular_function
GO:0016763 transferase activity, transferring pentosyl groups
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 400 Expect = 8.0E-9 / Score = 45.3 Expect = 5.4E-15 / Score = 54.7 Score = Expect = 5.5E-84 / Score = 281.1 Expect = 4.2E-38 / Score = 131.3 Score = Expect = 7.4E-131 / Score = 434.5 Expect = 3.9E-17 / Score = 61.7 Expect = 4.1E-128 / Score = 425.7 Sequence SM00941 PF07831 SSF54680 G3DSA:3.40.1030.10 PF00591 SSF52418 PIRSF000478 G3DSA:3.90.1170.30 TIGR02644
IPR Term IPR Description Source Source Term Source Description Alignment
IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal SMART SM00941 PYNP_C_2 coord: 305..379 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal PFAM PF07831 PYNP_C coord: 305..373 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal SUPERFAMILY 54680 Pyrimidine nucleoside phosphorylase C-terminal domain coord: 298..393 IPR000312 Glycosyl transferase, family 3 GENE3D 3.40.1030.10 coord: 22..290 IPR000312 Glycosyl transferase, family 3 PFAM PF00591 Glycos_transf_3 coord: 31..261 IPR000312 Glycosyl transferase, family 3 SUPERFAMILY 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain coord: 27..282 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase PIRSF PIRSF000478 TP_PyNP coord: 1..395 None No IPR available GENE3D 3.90.1170.30 coord: 291..385 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic TIGRFAM TIGR02644 TIGR02644 coord: 1..378
Blast
BLAST of TCONS_00066466-protein vs. Swiss-Prot (Human)
Match:
TYPH (Thymidine phosphorylase OS=Homo sapiens GN=TYMP PE=1 SV=2)
HSP 1 Score: 340.887 bits (873), Expect = 9.201e-114
Identity = 175/387 (45.22%), Postives = 243/387 (62.79%), Query Frame = 0
Query: 1 FTGMTSEESAALTSAMKKSGDVLDWPAEWKDQVVDKHSTGGVGDKISLILAPAVASCGLKLPMISGRSLGFTGGTLDKLESIPGFNIKFSPEDITKALETAGCCIVGQTATLVPADKILYSIRDITSTVGSFPLIASSIVSKKAAEGISALVLDVKYGSGSYQKTLFQAEELASLMVDISCQLGIKTSAVITHMDHPIGKMVGNAVEVIESIECLQGKGPNDLMELVTTQGGVLLYLKGICESPEKGKEEIERRIKNGDALKKFEEMAIVQGVEKTVAENLCKNPYS----VLSLSSNNTILHASSSGFISDMKAISFGEVSSRLGNGRQVPTDDVTYDTGIQILRHVGDEVKSGDPILKVYHKEKTLDAGFKSKLEQAVTVSSTKP 383
GM EE++ LT A+ +SG L+WP W+ Q+VDKHSTGGVGDK+SL+LAPA+A+CG K+PMISGR LG TGGTLDKLESIPGFN+ SPE + L+ AGCCIVGQ+ LVPAD ILY+ RD+T+TV S PLI +SI+SKK EG+SALV+DVK+G + QA ELA +V + LG++ +A +T MD P+G+ VG+A+EV E++ C+ G GP DL +LVTT GG LL+L G + +G + + +G AL +FE M QGV+ +A LC + +L + L A + G + ++A+ V LG GR + + G ++L VG ++ G P L+V+ L L++A+ +S P
Sbjct: 80 LRGMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQAGCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSKKLVEGLSALVVDVKFGGAAVFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPPDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARALCSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVGAELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAP 466
The following BLAST results are available for this feature:
BLAST of TCONS_00066466-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
F T G M T S E E S A A L T S A M K K S G D V L D W P A E W K D Q V V D K H S T G G V G D K I S L I L A P A V A S C G L K L P M I S G R S L G F T G G T L D K L E S I P G F N I K F S P E D I T K A L E T A G C C I V G Q T A T L V P A D K I L Y S I R D I T S T V G S F P L I A S S I V S K K A A E G I S A L V L D V K Y G S G S Y Q K T L F Q A E E L A S L M V D I S C Q L G I K T S A V I T H M D H P I G K M V G N A V E V I E S I E C L Q G K G P N D L M E L V T T Q G G V L L Y L K G I C E S P E K G K E E I E R R I K N G D A L K K F E E M A I V Q G V E K T V A E N L C K N P Y S V L S L S S N N T I L H A S S S G F I S D M K A I S F G E V S S R L G N G R Q V P T D D V T Y D T G I Q I L R H V G D E V K S G D P I L K V Y H K E K T L D A G F K S K L E Q A V T V S S T K P K P R N R V E K V I H R S S S S S R I F M V S Q 50 100 150 200 250 300 350 400 Expect = 9.20e-114 / Id = 45.22 Sequence TYPH
Match Name E-value Identity Description
TYPH 9.201e-114 45.22 Thymidine phosphorylase OS=Homo sapiens GN=TYMP PE... [more]
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