XLOC_041428 (gene) - C. hemisphaerica

Overview
NameXLOC_041428
Unique NameXLOC_041428
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_451:1375104..1380866+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041428 ID=XLOC_041428|Name=XLOC_041428|organism=Clytia hemisphaerica|type=gene|length=5763bp|location=Sequence derived from alignment at scaffold_451:1375104..1380866+ (Clytia hemisphaerica)
TCTAGTTCTTATCCAATCACAACCATTTGGGTGCTGCATCTACCATCTGA
caaccatcataaaaaagtgagtccaaacttttttgatgttgcaagtattt
aatttttcaaatatacctAGCATGGTCaaatttatccacaaatatacCAT
TTCTCTTTTCATTGAATCTTCTCGACATTTGTTTGTACAAATTATTAACA
TTTGTGATTTATACATAATTTGTATAGTTAAACCTTCATCCAAgattcgt
tgaaaagatattcaggaGTGGATACTTTTGTTCGTGTAGAATATGCGTTG
AATAGAGTCATGGTAAGGTAAGACCTGTTTGGCTCAGACTAGTTTTTAAG
ATGTTTTTCACTAACTTTCAAATCTTTCGCTGATCAATTAATGGGTCCAT
CATAATGCCAAAGCTTGAGGGAAACaatttgatttaaaagttttacAAAT
GTTTTAGCTACAATTGCGGTGAAAGTTACAACTTATTTGGGTCACtcgtt
tttaaaaaatcttgaagttttcaaaaaatgacgatATCGGAAAAGAATTT
TATGGAATCTTTCGTTCAGacaatgaaaattgaaatctcATTCTTCTCAA
AGAGATAGATatcatttaatgttttttttaatctgaGAGAATCCAGACAT
ACGTTTCCTAtcaaaacattctttcaaaTCGGAGATTAAAAATTGAGTCA
GAAAAAAGAGCCGACCCTCTAATTGTCTTTATTATAAAGTTCTGACTAAC
TGGCTAAAAATGCTATTAAGTAATTGATGCTATGCATTTTTTGAACTTCT
GTGAACGTTGGGATTTGTATCGAGGAAGATATTTTGTCAGAGGGAATAGG
CAATTGAGCTTAACGCCCtcagggctagagtagaatctttTCTTACCTTT
CTCaggtaagaaaaagtgaagccacttatcacccatccagaacgcgccta
gaaggcaccacaatcatgacgacggattgttcggttcttttgtttttgag
gactgcattttttaaatctagtgatagattttactttcaatccggagTTT
GCGTAAAAATCACGCGCAAgggttctggatgggaaataagtggcttcatt
ttccatccaggagcctcgagtctagcccttcgcgCCTGGAAGTTGATGGA
ATAATTTTTGCAACgttcgttttgaaaccattaccacgGTGATTAAACCC
ATTGAGTTTTCGATTGTTACTTTTGTCATAGAGCATACTTCTTTTGAACT
CCATTGGAAATCAATTACCATAGAAAAAGCGCAGCTTCCTAGACTGTCGT
CGTTTTGCATAATATCCCAATTCTCATACTAAGATTCTCTTGaattttcc
ggaatctttccgctatttttccaAGATAACCGGCATGAGACTGGAAAGGA
TACTTTCTTAAAGGGACGGAAAGTCTTGTGCTTTAATTACAAAACTACCT
AACTTTCCGAAGTTTCTTTTTCAACTACccgaagtcctggtctttttcca
cTAGAAAAATgacaaaggaatcttagtgcagaaatggaaatcttatgcaa
aacgatGGTAGCTTTCTAATATCAGTTAGCGAATTAAGCAAAAGCCTCCA
TTACATGTCGAACCCATCCTatatatcagattataaaaatacagaaaCTG
TCTTGGTATGCTTTGCTCTTGACGTAATCAGTGAAAATTGACGGCAGTAT
TTTGacaacagattttttgaaattgcgGTTAAGGAgggattttactttaa
aaaaaggtgtTTGGTTTGTTATGATGCCATCGATTGCGTAATACTTTGTG
GTATTTTGCAGAACGTTGTTTAAGAATCTGTGGAATTTCAAGTGTTTGTT
GGGTTTGTGCAGCGGAAAGTGCTTAGGCACTCTTTGTGCAGTGATCTCTA
GCTTAGATTAGGGCCTATTCATACTATGAGAAAGAGTATGTGTCGCATTG
AACTATTGAAAAGGCCAAAGaaatactttcaatttttcgaaaaatggaaa
gTGAATAAGTAACCCTTTTGTTCCAAATTTGCTTGGACTCACTCACTAAA
GGAAGTATGCCCCAAAAAATCTTCCCTAGTGAGAAAATGACCCTGAAACT
TAATAAATATTACACTCGCTTCTTACAGACCTGGTGGAAATCCCTCCAAC
TGAAAAGATTTGCAAAAATATCTTCCCAGTAAAAAATTATAATCTTTGTC
cacgctgaaaataatcaaataaacaaattctCGGTAAAAAATATTGTGCT
TTTTTTCATTGACATTATAAATTTTCTCTGAACGATGGAATTCAAACTCC
CCTGCCATTAAAAGCATGCGCAAATCAATTCCCATTGattttcagtccgt
tatttttacccccgcactggttgaaaaaatcctacAAGGGTCTGTGAGAA
GTCCAATGTCTTGCctatataacgttaaatgaatgtTGCCTGCTGTGGTG
GAATAGCGGAAGAACTCTGGGGATACAATAAATTTTCATTGCGTTCAGAG
AGTCTagtcaaaatttaaaacttttgccGGAACCCGTTTAGCCGGAGTCA
ACGTGTGACTCATGAAATTTTTAAACTAAATGAAGATTATGGACGATTTA
GTTAAAACAACGATTTAATGTGTTTAATTTTTGGAGAGCTAAGCTTTAAA
TTTCGATCCACAAATTGAGCGCTTAATACACATCCATTATCTACTTAGAC
AGTTCCCTCATTGTTAAACACTTTGCTTTTCCATAAGAAAGAATTTGTTT
TAACTTGAAGCAAGATTCAGTCAAAGGGGGATATCAAATGTTTCGccatt
tctaaatatttttgatgGCGAACTGATTTCATTAGGGTCACATCAGAATT
Tgttcaaatgaaattttgatggtgcatacttattgaaaatttcagttttt
aaattttgttttaaacaatgaacattttgaaaaatttcctaaaaaagaat
ttcaaataaaaaatattttggagatAATCAAGTAATGTGTTTTCATATTT
GCTAATGTTTGCAGAACTGGTTCATTCACACACACGCACACGGGAAAAGT
TTTATGATGTCAACGACCATAATACTACTGTATGATCATTTTGTGAGCTG
TAAgttatttaagcaaaaaaaggtttcttgttgaaaacaaatttttcgtt
TCAANTCAGAATttgttaaaatgaaattttgatggtgcatacttattgaa
aatttcagtttttaaattttgttttaaacaatgaacattttgaaaaattt
cctaaaaaagaatttcaaataaaaaatattttggagatAATCAAGTAATG
TGTTTTCATATTTGCTAATGTTTGCAGAACTGGTTCATTCACACACACGC
ACACGGGAAAAGTTTTATGATGTCAACGACCATAATACTACTGTATGATC
ATTTTGTGAGCTGTAAgttatttaagcaaaaaaaggtttcttgttgaaaa
caaatttttcgttTCAAATATTGAGCATTTCTTACTTGGTTGCGACTTGC
TTGATAGCTGTTTGAAGGATTCAGTTAGCTTGGAAGGTTCGCTTATTTTT
GAGCCCCTTCCCAGCAGTTTGTGCGATAGCTTGATCAGGaatttgattct
aaaaaagattttaggcGTAATGCACGAATTTTGGGTGTTTTCATGTGTGT
GATTTTGTCGATTTTCATTTGATCGTGATCAAAGAAAGAGAGAGATAGAA
ACTCGATGCGATAGCTTGACTAGAAGGTAGCCTCTGCCGGAGGGGAGGAC
TCCTTTAGTTTCGAGtcctcgggtaagttatggcatgtctcaaaaacctg
aaaattaccataatttttgaaggccattagctggcagaaaatggggaaac
caatgatttgctacgaagggtatcatgatgaagtttcgctttaggggtgt
tacctaattgtttacgcccttattttcgcgaaaaaccgcaaaaactaaaa
aatgatgacgtcagcaaaacttgtttttcaaataactccagtttggctaa
agatagaagcatgaaatttggactgaagttgcatatcattaaaaggatca
ttttgcaaaaaagtttttttgaaattttgctgacatcagcactttattgc
aaaatttcgtattttgttgatttctgctgacgaaagcaaaatttcgaaaa
aaaaaattttgcaaaatgattcttttaatgatattcaacgttggtccaaa
tttcatgtttctaccaTTATCCAAACTGGAGATATTCAAGAAACAAGTTT
TGCTAACGTCAGCACTGAGTCGTTACGCAAATTGCCTGACGGGTCCGTGC
AGTGGTTAAAAGTATGTTTTCAAGATAGCagaaatacactgtaagggtga
aaattttagaaaatcaagaaaatttctaatttttgctcgaaaactTCGAT
TTTTTAGCACtgagaaagttgaaaatttaagaaaaaatttactGTACCGA
TTACTGTACTGATGGTGCGATTCTAAAAAGCCGCGCATATCTTCAGTCTA
AAGCAATTACAATTTTGACTCGTGTTTCTTATGTAGTGAAAAGTGAACAA
AACAAGAACAATAAACAAGGATAAAGGAAAGATAATGGATTTGTTTGAAG
ACTTGGATGAAAACCGATGGGAAAATAAAGGCCACCCACCTCTCGATCCT
TCCAGCATTGGTAAGATTTTCCATTCAAAATCATGattattaaaaagtga
aatggaCTATTTAAGAACCCATAACCCCTGTCAGAGCTCTTTTATCTACT
TCCCAAAGCGAAATAGACTATTTAAGAGCCAATGACCCCTTGTTAGACAT
TGGTAAGCTACTTAATCTCTTATAATTGTTATTTGGTCATTGAAAAGCTT
AAAGGGTTCACTCGAAAGTGAAATAGAAAATATAAGAGCAAATGACCCCT
TGTTAAACATTAGTAAGCTTTTTAATCTCTTTTAAAGCGTCATTTGGTTA
TTGAAAAAGTTGAGGGGTTCGATTTTTGTGGACACACTGTGTATGCAGCA
TAAGCTTAAAAATATTCTGAAATAGAACCTCTCTCTCCTCTCTCACTGAC
CCTTTATAAACACTATGTATCTCTTTTCAGAGGGTTACACATCATATATC
GTATTTCAACGGCAAATTGTAGAAGACGCAAAAACTATGATATTATATTT
GAAGACAGAACAAGGAAGACCGTTGCAAGTCAAACTTTCCAATTTCAAAC
CGGACAGAAATCCAATGAAAAGTGTCCGAAATTGTTGTTTAAAAATAcgt
aaaaatgaaattgttggtATCATGATGGACAGAGATTGGGTGGAAGCAAA
ATGAAGGACTGAATAGTAGTTGAATGAATACGACTTACTGGACGAGTGAT
TACGACTGAATTGATATTCAACTTTCTTTGTATATATGTTTTTTCTATAT
TTAATTCcgtgaaagaaaatgaagaatttctATATTTGAGCGATGGCACG
ACTCACCattagacacccctgtctcacagccccggtggaacttttttttc
tcagtgggaGCAAAAACTTCCTATTGAAATTCCTTTtctcaaaggttaaa
aaattcagtgcaatttttaaacatagaATTTCGAATGCAGTTGAAAttct
aaggtattttcccaccggagaTGAAATCTTTGTCGATATTTCCAGTGGAG
CTGGgctcccagtgggtctgtgacagaGGGATATAATTAGAAACAACAAT
CGGACCCGGTGGAACAACcgttaaagtggggaggctgaaggctcaaaatg
acaTAAAAATTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066203TCONS_00066203Clytia hemisphaericatranscript
TCONS_00066204TCONS_00066204Clytia hemisphaericatranscript
TCONS_00066205TCONS_00066205Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066204-proteinTCONS_00066204-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:1375104..1380866 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.06	0	0	0.31	0.55	0.07	0.27	0	0.13	0.68	0.04	2.02	0.88	0.2	0	0.11	0.04	2.49	2.68	0.16	0.11	9.3	12.71	23.94	18.06	0.08	0.17	0	0.19