XLOC_040875 (gene) - C. hemisphaerica

Overview
NameXLOC_040875
Unique NameXLOC_040875
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_433:184873..189082-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040875 ID=XLOC_040875|Name=XLOC_040875|organism=Clytia hemisphaerica|type=gene|length=4210bp|location=Sequence derived from alignment at scaffold_433:184873..189082- (Clytia hemisphaerica)
TTTTCTTCATATAACTAGACTTTAGGAAAGATGTTTGTTTAAAAGTTGTT AGTTGAAATTGGTGGAGGATCTCAATTCAAAAAGCCCTTGAATCTTTTAC TGGAGCTTTTTTTTAGATTTACGATATACAATCGAACGATAAAATGTGAT TAGTTGATTATATATTTTTGGCATCATATCAACAAAATGGACAAAAAACT GTTTACGTCTCTACGAGCTTTCTGGAAGAATTATCTCTTTAATAGTATGT TTACTGTATTCATAGTATTTCTATTATCTCCACAATATGAGGCAACATCT TCACTTCAGCAAGCCAAATACGCGTCATGCTTAAATGATAATTTCTATCT CCGAAAGTTCGATAAAGTTGGCATTACAATTCACTATCATAAAACTGAGA TAGTTAATGACCCTGTGACAGATTGGAAAAAGTGTTTTCAACGATGCCGA CTATTGAATTGTGTTATTTTCACCGTTTGGAAGATTACTTTGGACAATAC TTTCACATGTCGATACTTTTTTACTTTACGCAATAGGTAAATTTTTCTTC TTTTTATTTCAACCAGTAAATTCTAGCTAAGGCTTGTTTCACCCTTCATG TTCAAAATTTTGCCTGGAAAACACGGTTCTTGTCATTTTTGCACCCTTGG TGTAAAGGCTTGGGGACATGTGTCTCATGGTTTCTTTTGTTTGTTTCATG GGACAAAAAGTGAGGGAAATACCCAAAAGACACGCTGATTTTGTCCATTG TCATGTCCCCAAGCCTTAAAACTAAGAGTAGGTAAAAATTTTAGCCTATA ATGAACCATTGAAGGACATTGAAGTCTTTAGAGTTTTTGGTAAAAATTTC TTCTCCGTTTGGAAAATACCCTGGAATTTCAGCCCCACTGGGAAATTGAC TTTAATTTCATCCCCACTCGAAATTCAACGTTTAAAAGCTGTTCTTCAAA ACCATTGCCACTTAATTTTTTATCCTTGGAGCAATAGACTTTTTATCCCC ATTGGGATTTCAATAGGAAAAAGATCCCCTGGGGCTGTGGTACAGGGGTG TTAAAATGTATCTTTTTTTAGATTTCATCCTTGCGCACGTATTTCCACAC AACCAAACTTCCAAATGACCTTTGTTCGAACAGAGTGTAACCCTTCTACG GATCCGAAAACACAATTTGTTCCTGTGGTATACGATGAAGCATCGACCTG CAACGATATACTTCAGACTGGTCAAACTAAATCAGGTTCTTTTGATTGTT TTATTGTTCACCCATTTTTGAATCTCAAAAAATAGAAACCAAGATTTGCT AGTTGGTGAATTTTAGGGCTGTTCCATTAAAAAACCATACAAGTGGACGA ACCTTTTCAAGTCAAAAAAATTCATAAAAATGTTTCGATACCACCTGGAA GATAGCCAAATATACCTTAAAGTGAAGGTGGACGAACTGAAATCAGTTTT CCACCCCCTGGAAAAAATTAAAAAACACTCATTTAGACCCCTTGGAAGTT CTGCTCACATTCATTATCTCGGTCTCTCCACTGGTCAATTTCGCCAAAAT TACGTCCCCGTTGGCAAAAACAATGGCAAAAATACCCTATCTTTTCAGCC CCATTGGCAAATTGACTTTGATTCTATGTATGAACCTTTAACTTTATTTA CACACCCAGGAATCTACCAAGTTGGCATATTTGATAAGTTGTACGACAGT GAAAGTTATCAATATGTGTTGTGTGAGATGAATGAAGAAGAATTCGGTGC CGGTTGGACAGTCATTCAAAGAAATTATGAAGCTGAAGATCGGGAGAATT TTTGGGGAAGTTATCAAAGGTAGCAACACTTTTATTCATTATCTCTATAC CTCATATATTCAAACAACAATTGACTTATTCTTGTACCCAGGACCATAAG CTTCTTTGCAATATAGATGGTGCTTAACAGTCCATACCCAAGGTCATAAT CTATATTATGCGATAAAGATAATGCTTAAGGGTCTGCTTATTTCCTTTCC TCGTTTTTAAGGTGAAATCAACAAAGGAGTGCCAAAATTAGCAATCATAG GCGCTTTTCGCTTCTCTTTTTCTCTCAGTGCCCCTTAAAATTCGGCCGCT GTAGGGGGGTGGGCAGTCCCCCCTTTAATCCCCTGTCACCACAATACTGT TACCTACGGTAAATCCTAATAAGGTGCAAACCTTACTTTTTCTATGAAAC CTTTCATCATTGAATATCTATATTAATCTTCGATATGAAATCATCATCTT CTGTGACTTCATCAGCCAAGAGCTTATAACTAGCAGTCGCTTCATTTTTT CTCTATGTTCTATGTTAATCCTCTCTTAAGGTACAAGCATGGCTTTGGGC ATTTGCAATCATCCTTTTGGATTGGTCTGGAAACAATGTATCAAATGACC AAACACAAAGACCAAGAACTCCTTATTGTGCTTCAAGTAGGATCAACAAT TAAACGAGCAGTCTTCGATACCTTCTACGTTGGTAATGAAACCGAAGGCT ACAAGTAAGTTCAAAAGGACCGTTTTGATGTTTTTTTTCGATTGTGAATC TAAATATTAAGCTTAAAACCCAGAACAAATTCTGAATCCCAATCTAAATC GCAAAACACTCACAGTATCTAAAAAATCACTCAGGAAAAATACCCTGAAA TTTCACACAATTTGAATTAGAAATGTTCCTCGTTGCTGGTAGAAACGCCG AAATATTGGTCATCCAAAGTTCATTAACTTGTAAACCTAATTTCTCAAAG AAAACCAATCCCTCTTTTATTTTTTCCTTCTGGCTACACATTCATGTTTA TTCATTTATATCCATATAATCAAACCTATGGTTAAGGACTCAAAGAACTG TTCGCCGACATAATACACTTTTTTCTCAATTCTCTAGGTTGAACATTGGT GGCTATTCACAAACAGACTCAACAATGGCTGACAGTAATACAACAGACAC TGTATTTGCTGAATTTCATAATGGCTTCCCTTTCACAGTTCCAGAGGCAA GTACCTCAAACAAAAAGTGCTCATAATCTCCTTATACATGTACCCACGGG GGAGGGGGGTACTAGGGTTGCGGGCTGACGGGGGGGGTTGCCACCCGACT TTCAACCCTCGGACCCTTACCGGGACTAAAAATGAGAAAACAAAGAAAAA TTTTGTGAATTTTACGACCTTTACGGGACAATTTTGACCAAATTTCGATT TTTCTGGGGGTAAAAATAGTTGAAATTTTCCTATTTCTCCTACCCTTAGT GGGACTGAAATTTGATTTTCTGATTTTTCCAACCCTTATTAGCGAAACTT TGGAAATCCAAAAAAGGTACCCTTAAGGACGGCACATACCGTACCCTCCA TTTTCCTAAGTACCCTCCTCCCCCCCCCCCCCGGNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NCCCCCCCCCCCCCCCCCGGGTACGTGTATTAGAGGGAAAGAAATATGTT TTCGTAAATGTTTTTATGATTATCAATATAGAAGAACTTGAAAAATAACT GGAGGATCCCTTTTGAGTTTATCTGAGATCATCAGGGAAAAAGCGCGTTA AGTAGAGAGAAGACGGCTTCGTTAGTTTTTTTGTTGAAATATCGCCTGAA AATTCATAGCCCATGGTCCACTTAGGACTTTTTGATAGACTGGTTGGCGT GATTAAGTGGAAGTCTATGGTAGTTTCAAATTTTGAGTTTTTGTTTAGGT GGACTGTAAAACAACATGCTTAATTTCCTTTATCTATTCAGGTTGGTGGT ACTAATTGTGCTACAGCTTCTAAAGCTGGTTGGTGGTTTAATCCTAACCC CAGTGATTGTTTCAGAGTATTCCTGAATGGACAACCAGATCTCAATATGT GCAGTCAAGCAACAAATGCTCATAAAAGTTTGATATGGAATTGGGCATCG ACTACTTGCTTTGAACAATCAACAATGATGATCAGAAAAAGAAAATATTG AACTTTATATTCAGTCAGGAAGGAAAGACACTTTTTTTATTCTGCTACTG GCAGTTTCAGGCTATTCTTCCTGACTGGCATAGCTCTACCTATGTATCGA GCGCTGTAAAAAAAACTGAAGAAATCCTCACATTGCACTTTATACATATT TTTAAAGTAGTAGTACCCAGGCTGCTAAGGTTCGAGGTCTCAAATTAGGC GATTTTTTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065198TCONS_00065198Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065198-proteinTCONS_00065198-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:184873..189082 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08 0.23 0.06 0.23 0.04 0 0.17 0.41 0.73 0.33 0.5 0.82 10.92 9.85 1.44 0.46 0.89 0.71 16.53 15.52 4.84 4.9 1.44 3.39 4.25 6.26 0.4 0.35 0.12 0.15