XLOC_040613 (gene) - C. hemisphaerica

Overview


Name	XLOC_040613
Unique Name	XLOC_040613
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_423:9087..18219-

gene from alignment at scaffold_423:9087..18219-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_040613 ID=XLOC_040613|Name=XLOC_040613|organism=Clytia hemisphaerica|type=gene|length=9133bp|location=Sequence derived from alignment at scaffold_423:9087..18219- (Clytia hemisphaerica)
GCTAGATACCATACAGAAAATTTCAGATTTAAAAAATAACACAATGGCTG
GAAACAATCATCCATATTTTATGAAAGTTGCCAAAAACTTCAATCAAAAC
AAACGGAAAAATGCGACACCCGATGATGGCGGAAACGCCCAAAATCACCA
AGATCACAAAAAACGATTTTTGCAAACACCGCCTGGTTATGAACAGAAAG
CAGTTTTAGATCAAAAGCGTCAAGAACTAATGCGAGAGGTATAGTTGAAA
TTTAATTTTTGCAAGCTCATTGCTGGGCAAAAGCAGTCTGAAATTGGGAA
GTTTTGCCTTGTAACACGCGTGTGTTGGTGGACAAATTATCTGAGTGGAC
GGGAGCTTTCGACGACGGAATTTGTCGTTATTTCTGAAATTTGTCGTTCT
TTTTGTCTATTTTTACTAAATGTAGGTTTCTTTAGATTAACTCTCTCCGG
GAAACTGTCGGTTCGTTGAAAGTAATACGCAATTAGTATCACTCCTGTCA
GATGCGATTCTCATTTTTTGTTTTGACTCATTTTTATTTTTTTAGGTTCG
ACAATTACCCATTTTCTTTGGTAAAGGGGCGTTGATACAAGAGGTTGCGA
GAAACGAGACTGTTATTGTCATGTCGGAAACTGGCAGTGGAAAAACAACA
CAACTACCTCAATACATCCTGAACCAATATTCTAATAGAGGTTTGTCTCA
GAAACACTCTCTTTACGGGATACTGCTAATAGACTTTCCAGGATTTTTTC
TCCAAAATCTTGTTGCAAAGAAATTTTTATCACTTTTTGAAGCAATAGAT
AAAGGCTTTTCAGAATACATTTTAAACGGTAATATCAGAGTAAAATCGAA
GTAATATTTTAATGAAATAGAGGCCCGTAATCATTTTATGTATCTGTGAA
AGAATGTATTGTTGTTGTATGAGCATATTAATGCATTCGGTTCTCAATCG
ACTCCTTCGCCACTATTTGCCGATGAGTCAACGTATGAAGGCATAAAATA
GACGCTTATATTTCATCGTTATCTTATGTTGATTGTTTAACAAGTTTGAT
GGCATCCGTACAGCTCAAAATATTTATCCAAGTAATGAAATATTTTGCTT
CACAATTTTCCTCAGGGTAATTTTAATACTCCTACCTTCTATAGTCGTTT
GGGAGAACACGACGGTCTTTTAAATAACTAGTTACTCCAGCAGAAACTTT
TGTTGATGATAATGTCATATAATTGATTTATCTTTTACAACACAGCTGTT
ACCTAGGGACAAGATCATTTATCCCATTTGTACTGGCTGAAGGAAAATAA
TGTATGCTGGAGTAATTTGTTTTTCTACAGACCGTCGCGTTCTCCCAAAC
GACTATAACTTTACTGACTTGACTATTTCTTGGAAAAAACGATTCAAATT
ATGTTTTTTGCTCAAAAAGACTTCGCAAATCATATCCTAACCATTTTTCG
TTCGAAGGTATAGTATGCTGCACTCAACCCAGAAGGGTGGCCGCCATTTC
GGTGGCGNAAGGTATAGTATGCTGCACCCAACCCAGAAGGGTTGCCGCCA
TTTCAGTGGCATCACGAGTTTCCAAAGAGGTGGGCTGTCCATTGGGTGAC
GTGGTAGGATACACTGTTCGTTTCGAAGATGTCACTAGTCCGCAAACGAA
ACTGAAATACATGACGGATGGTATGTTGCTGAGGGAAGCGTTGGTGGACC
CTTTATTAAAACGGTATGATTAACTACTATATATATGAAATTCTTGATAT
TCATGACTTACGGAAACACACGAAAAACACCGGGCGTTTGCCACAAGTTT
CAAGTTTAAACAATGAAACTGGTGGCAAACGCCCGGTGTTTTTCGTGTGT
TTTTCATATCAAGTATACCAGTAGATATGAAAAGGGACCCTGAACAGGAA
TTATATCCTTAAAATGTTTTCTAATCTTTCAACGAAAAATACTTAGCGAG
GGACTTTTTTGATCCTGTGTTTTTCTGACCTTAGCTATGGCTGGCGTTTA
ACAAGGTATCCTTTCCCAGTGGTGGGGTGAAGGCTGTTGATGTGACCTAA
GGGCTCAAAGTGTTTGGCATTCCATAATCATTGGTAGTGTGCAGATAAGC
CTGCACCCCACCGCCTGCACCCCACCAGACTCTCCTTCCTTGTTAACTTG
AATTGAAATCTACAATTATTTTGACACGCAAACGTTTTTGTTAGGTGAGA
CCAATTTAATTTGTTGTTCTACCAGGGGGGTACAGCCGCAGGGTACTAAC
CCATAGCCGGGTGGTGGTGTCTAATTTGGAAATTTAATTTTGGGGTGGGG
GTGGGTATATTTCCAATTTTAAGTTAGTACCCGGTACCAATTTTAGGGTG
GGGTGGGTATCATTTCAATTTTTCTTCAAGTACTCAGGCCCTGAATATGG
TAAATTTGTTTAATTTTTCGTCTTCAACTTTCAGGATTTTGATGAGAAAA
GATTTCCTTGTTATGGCTTACAGTATATGACAGTATTGAAAAGTTCCCCC
TTCCAATTGAAGGTACTTTCCCTGCTTATCAAGTATGTAGGGAAGTTTGG
AGGTTGTTAGTTTCAATAGTTTTCAGAAAAAAGAACTGTTATGTTTCTAT
CAATAAAGAATTATTTTATTCAAATTCATGGGTACTTTCCCTACTTTCTA
AGAGAAGAATTTTATGACCACTAAGTTATACAAATATTGAAATAGCTAAT
GTAAAGAAACCTATTGTTCACAATCAGTATTGTTTTAATTAGTGAGAAGG
ATCGTTCTCAAGTTAGAACGAGGTATATGTTTGTCATTGCCTTCTGATGA
AAAGAATTACAAGCTGTTGCATCCAAGGTGATACAATCTGTCTTTTAAAC
AATAAAGTTCTAATCCAAACTGGTGATTGTTTTTGTTAGAGGGGCTAGTT
TATTGTAGTTTATTGCAGTTTATATTATACCCTATAGCTTATTTCTGTTT
ATATTTGTTTGTTTGTTTGTTTGTTTGTCTGTTTGTGACAATTAAGACGG
AGGCAGGTCAACTAAGCAAAGCCAACCAGAGCCAAAAATACAACTTTTTT
CTATTTCAACTTCTTTCATAAGATTGACACAGTTTTGAATAATTTGAATA
AATTACCAATCTATTGAAGAAGAAAAAATAAGGAAATTCATCCAATCCAA
GCGTTCATAGTATTCTTCAAATTTTATCAACTTGATTTTTACTTCTTCTG
ATAGATGTATACTTTTATTGCCGTTATTACAGCTATATAATATTTTACTT
TTGCCAAGGAATTTCGTTGTTTTACCTTTGTAATTAAAAGTTGTGTTTGA
TTTAAAGGATTTAGAGGATCTGAGTTAAAAATATACAATATATGGTATAT
ACAAGTCATAATAACAAAGAGCTGCTTTTGCTGGCCTTTGAAAGATTGGG
ACCATGCTTGGCAAGTTTTAAGGGTGGTGTCTCCTATTTTCCTTGGTAAT
TTTAAAGCCGGTACCCGGTAATTAAAAAGGGGGTAGGGGTCCCTTTTTCC
TTAAAAAAAAGTAAGTACCCGGTACTAAAAGGGAGTGGGGTCCCTTTTTC
CTTAAAGAAAAAAGTAAGTACCCGGTACTAAAAGGGGGGCGGGGTCCCTT
TTTCCTTAAGAAAAAGTAAGTACCCGGTACTAAAAAGGGGGTGGTGGTAC
CTAAGACAATTTTTCTTAAAAATCAGGTTAGTACCCTATGGGTTAGTACC
CTGCAGCTGTACCCCCCCCTGGTTCTACGGGAACAACCGACCCAGCATTT
GCTGCAAACGAAAAAATAATAATATTGAATTTCCTATGCCACATATTCTA
ATACTATTCATTTAAAAAATGTACGCCTAAAAAAAGTTGAAATGAATCTA
GAATCGTGGTTACGTGATTACAAACTCCATCAAAGATGAATGATTAATTT
TCCGACCAAGATTATTTGAAAATATTACTTTAAAGCCTAATTACCTTCCT
TGATTAATGAAAATGTTATTTTTATTTTACCGACCGACCGACTCATATTT
TGCTAACGATCTGCCCGTAGAACAACAAATTTAATTGGTCTCGCCTAACA
AAAACGTTTGCGTGTCAAAATAATTGTAGATTTCAATTCAAGTTAAAATT
AAATTGATCTCGCCTTATCAATACTAAGATAATTTCTTTGATCTTCTTTT
TTCCAGTTATTCAGTGGTCATTTTAGATGAAGCTCACGAACGCTCCATAC
AAACAGATGTTCTTTTCGGCGTCGTTAAAAAAGCTCAACAGGAACGGAGA
AAACAAAATGGTTTGAAACCATTGAAAATTATAATCATGTCAGCCACACT
TCAAGCGGAAGAATTTGAACGATATTTTAGTGGTGCCAAAATTTGTTTTT
TGGAAGGAAGACGACATCCAATCAAAATCAAGTATACAGAAGAGATTCAA
AAAGATTATGCGCATGCGACCTTGGTCACTGCCATGCAACTGCATCGTGA
AAAACCACCAGGGTAACAAATTAATCTTGCTTTTACCGATTCATGTTGAA
TTTCCTTGTTATATTACATTAAAGGGATAATCAGATGTTTTAAAATTTTT
GCTTTTGGATTCTTACCATAGTCTTGAATCAGAAGATTATATCATTAGTT
TTTTCTGAGTTTTTGCTCCAAAGATGCGTATTTTAACAATGCCCAAAAAT
GCCGGAAATCGCCGTTTTTCTAAATTTTCATTTACTTTTTTCCTTATAAT
TGGTTGTTTTTTGGACCTACCCCGGTGGAGGTCCTATAAATTAACCTATG
TTTGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTGGTCTGTTACCAACTT
TTCTCAGGATTGAATCATAGGAATCTTTTGATTTTTGGTACAAAGGTGCA
AAATGGTGGTGGCTAAAATGTGACGGAGCCCGATTTTCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTAATAGCAATGCCCACCATCAAGCATGTT
TCAATTTTCAATAAAATTGATTTTTGAAGCCGGAACTATTTAAAAATCGC
TGGAACAACCTATTTTCGCCGGAAATCGCCGTTTTTGCATATTTTCATTG
GATTTTTTCCTTATATTTGTTTCTATGTTTTTCACACAAAAACATTATTG
ATAACAATGCTCACCTCCATCAAGCATGATTCAATTGTCAATAAAATTGA
TTTTTGCGACCAGAACTTTCTATTTATTTTTTACCTACAACCCTTCCCTC
TCTCCCCCCTATCAACAATCAATGATGAATTTATTGCGTTATGCATTTTC
GCTAAACGCTATATTTTCTGACTGATTTCTTTTCATTTTTCTCCTCGCAT
TGCTATCTAACTTTCATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTT
GACTTTTAAACAAAAAACAAAGAAATTTCAATGTAAAAGTTTCATCATTT
TGAGAGATTTTTGTCGTCTTTTTCAGTTGAGTTATTATATACTTTTACTT
CAGGCAAGACATTTTGGTGTTTTTGACTGGACAAGAAGAAATCTTATCAC
TCGCCAAAACAATGAAAGAGATCGCCGAGCACGTCAAAGATGGTAGGTAC
ATCTGGAGAAGATTTTTGAGTCTTGTTAGGTTTTGCTGTGATTGTGATTG
TTGAAAAACTCAAGTATGGAGGTGTCGTTCTTCTGAAACTGAAGAAAAAA
CTAGGATTGATTTAACTGTTCCCTCCTGCTAGTTGGATCAGCCTAATTTC
ATTCTTTCCTGTCAAGAGAAAGTCTATCTAATTCCTCTAATGAAATGCAT
TTTCATTTGGTTTAAAGACTAATATGTATAGTTTAAATCATGAATATTTT
TTTGGGAAAATTCCCTTTTCTTCCGTATACTTTGATAACGTCTAGAAATC
TAATTGTTTAAATTATGGACAGTCTACGAACATTTTTCAGATGTCACCCA
AAATAGACAGATTCGAGTCAGAATTGGTACCGAAAGTTATACGATCCTCT
AAAGTGGCATCATTTCGACGATTTTTACTTTAGAATCTAATCGACTCTAC
TCCCCTTAAACAAATCATTTAAAGTCAAAACTGAATTAACAACGTTTCGC
AATTCTTCCAGATTTCAGTAATTTTCAAGTGTGTCCGCTGTTCGCTTCTT
TACCACATCGTGAACAAATGAGAGTGTTCACCCCATCACCAGACGGTGTT
CGTAAGATCATTCTTTCCACCAACATAGCCGAGACGTCCGTCACTATTCC
AAACGTCAAATATGTTGTTGATTGTGGTATGGTCAAAGCCAAAGGTATTG
TCATTTGCTTCAAATTTCTCTAACTCACATGGGCGTTCCAGGGGTTGTTT
CGTGTAATCCAGACAAAGTGAGTCTACTCTAAAGTCGNAACAAGCGGGGG
GGGGGGCGTTTATTTGGAACCTAAGAGTAATCTTGCCAAAGAAACCCGTA
TTTTAGAAATACTCACGAGCTACATATGACGTTATCTTTATCCTTTTTTT
TCTTCTATTTTCTAATTTTATCATTCGAGAACTTTCTACTCTTTAATATC
TTTTCAGCGGCTGCAAAACCACATTTTATGTGATCCTTATTAAAAATACA
TTATTTTTAGTTTCAGCTGACAAAAATTTGGCAAATATTTTAGTATGTAT
ATGATTAGAGACGTTCATAGAGAAAATACGGTATTTTGCAATTGTAGTCT
TTTTCTTTCGAACAGATTACAACCCAACAACTGGTATGGAGACATTGAAG
GTCAAACCAGTTTCCAAAGCTCAAGCGCGTCAACGATGTGGTCGCGCGGG
CCGCGAGTGTCCTGGCATATGTTACCGGTTATATCCTGAAGATTCTTTTC
GTTATTTGGATGAGAATACGGTACCAGAGATTAAGAGATGTAATCTGAGA
AGTAAGTGATTGAAATTCAACTGTCGTGTAAGAATGTGAGATAATAATCA
CCATGATTGTTTTCTATTTGTGTGGACCAATTAAAAATCATGTATTTTGT
CAATTCTTACATTATGGCTGCCATAATTCGCTAAAATTAGTTCTCTTAAT
GTATTTAACATCTTCAGTGATAAGATCGCATTATAATGTAAAAATTGATA
AAATACATGATTTTTAATTAAATTTGCCAAATTTTAAAAAGCTTGCAATT
GCTGCAAAATGTGTTTTCTTTGATAATTTCTATAAGCTAGACTAAAACCC
TTAAAACTAATTTTTATTGTAAGATTTGTTCTTGCCTAAATAAAAAAATG
CATCATTTGCGATAATTAGCTTAATTAGGTTAATTAGGTTAATATGTATC
TTTTGATTATTTTTCTCTTGAAGGTGTTGTTTTGAACCTGTTAGCAATGG
GCCTTCGTGACGTCATCTCGTTCGATTTTATGAGTCCACCCTCTGAAGAT
TCGCTGAAAGATGCTCTTCGTCAACTCGTTCAACTTAGCGCCGTTGAATC
TATCGAAAGCCAACAAGTGAGTACTCATCCCGA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00064763	TCONS_00064763	Clytia hemisphaerica	transcript
TCONS_00064762	TCONS_00064762	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00064762-protein	TCONS_00064762-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_423	supercontig	scaffold_423:9087..18219 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.88	16.98	6.33	3.99	9.77	7.17	11.1	12	11.99	12.73	13.78	14.26	19.61	25.59	15.67	18.88	15.08	18.37	9.8	7.53	10.21	13.27	28.47	26.51	36.82	34.76	6.06	4.91	17.17	23.02

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XLOC_040613 (gene) - C. hemisphaerica