XLOC_040602 (gene) - C. hemisphaerica

Overview
NameXLOC_040602
Unique NameXLOC_040602
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_423:214453..225163+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040602 ID=XLOC_040602|Name=XLOC_040602|organism=Clytia hemisphaerica|type=gene|length=10711bp|location=Sequence derived from alignment at scaffold_423:214453..225163+ (Clytia hemisphaerica)
tagagaAGTTTTTATCAGCCTTTGACTTGCGGTCAAACTTGATGAAGCCC TTTCGTTTGGTAGAAGTCTTATTTTAATGCGAAAGGTACTTAACAAAAAA AACACCTGCTGCAGTACCTTCTTTTGGTCCATCATTCCCTCACTCACACC ATCAACTCAACTTCTTCGCTAGAAAGATCAAGTCAATTGGAAGAAAATCA GTGTCTTGAATATGACTGTATTCTTCAATGTTTAGTAAACTCACTTTTCA TTTGAGGTAaggtttaaaagttttttatgtATCCACTTGTTCAACAGGTA TAACTCTTTTCACTCTTTAAAGACAGGTATTACTTTATTACAATCTCTCT TTACCCCTTACGTTCTTTACGCCAAAGGGAAATACtcctttttatctttt ttccaatttttcataacaaaatttttgtttcagttaCAAGAACATTTGCT CAAGTGGAAcaatgtattcatgatatgcaccactgcaatgtcttctgaca ttaaatcacggacccaacagctgattggttgtaagtgacgtaaaatcaga cAATACGTCAccttcaaccaatcagctgttggttccgtgaaagacattgc aatggtgcttATCATGAATTGAGTAATCCTTTCATTTTTGAATCTGTCTT TTTTTACTTATGCATTCTTCTTTGAAGATAACTGGTTAATAAGGATGAAT ATTTAACATGGTAAGGTATTGGAGCATGAGTATTGATTTGTGGTATATTT ATTAATCGCTCATGGGAAATCTGTAACAGTTAGTCTGTCTTTTGTGTAGG GGAATATAATAGCTGTAGTCTTAAGTATGAACTCTGGTATGTTTACAGGT AAAAACTGGCTAAGAACTCAACTCGGCCTGTCTTCCACTTTTGCTTTGAA CATCATACCTTATTATGAAAATTTGACCACTTCTTGGAATTTGATGAGTC AGCAATAAGCAATCAACTGATATCTTTTTTTCCAGACATCATGTCGTCTA CTGTGGAGAAAATTCCTCTCACCAATGGTGCTAACGAACGTAACCATAGC AACAGTAATAACAATACAGCTAGTGAGAAGACAGAAAGGGAGACGTGGGG ACGAAAGTTGgaatttattttgacatgtgtgGGCTATTGTGTCGGTCTTG GTAATGTTTGGAGGTaatttttcgaagtttttttccttcttcaCTAATAA AATTGAAAGGTTTTGATCACATAGAGGAGATTtggctttttcaaaaattt cttgtcGCTATACctggtgcgccacaaaaaagtttctcttctttgaaaca aattttttcgaaatctaaaaattttaaaagaaccatttctatttcattgg aaagaaagaaagatagacttaaattttgatggattatttattaaaatcga ttcattaaatcaaaagttatgttcaattgaatagaaaagttactttcgaa aagtgctgaaaaacgttaaaaattaacctatcaaatcaaacagaagcatg attacatgatacatcagtattttcgtttcagtcattaaagatgataatta gctgtctaaatgaccttagTTGTATAAaagaaggttgaatttcaatgaaa tgaagaaaatacGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATCACAGGTGTTTGCCA TAAGCAAAAGTTGGTAATGCAAAGTCTCACAAAATCGCATTTAgcaaacg caaaaaaaaaattccataatggcggcatcTTGCGAGAGCAATCAGAatac caaaataaacaaatttcaaaggcTCATTGTTAGTGTTTGAGTGAAGctat catcaaaaaataaaaataaaacaaacctttaacctttcaataatccaaat aaacaaaatatgtCAAATGAATTGATGTTTAAGTTCGAAAACAAGCACCA TTTCCACCATacacttttagagcaaaaagcaGTATTTCGCTGAAATCTGC TGCTCTTCCCAGGCAAATAATTTCTCAGAATGTCAGAGAGTCTGGTGCTG AATATATAGTTTAGTGGGTCAAGCTTGTTTTAGNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNTCATCTGAGACGGGGGTCATAAACGATCTTTGTC TATTTTGAAGTCGTACAATCTTTTACTTCTCAAAACCATTTAGATTCAGG TTTTATATATAATAACAAAGATctttaaccaaaatttgtttCATTAAAGT TATTTTCTTTCAGCGAAATAAGCCTTTAGTAAATATTTAAACCCCCGGTT TTATTTAGATATTTACAATGTGATTTTATAGCGGGAGTTGGAAACCGGCT AGATTGTgtgatctgattggctaaagGAGCAAACGCGGGACTCGGCCTAG GACTTTTTACCCGCGTTTTAAACGCGTTTACGGCAATGTTTATTCtttac actttcgttttcaaaatctgttGAACATGGATTTTGGCTTGTGACGATAA CCTCGCGTAACATCTGtgtgatatgcaccactggagagtctccCGTGAAC TTTTCCACCCAATATGTCACTTaaagaatagaaaaagtgaggtattgggt ggaaatttttgaaaattctcggACGCCTCCAGAGGTGCATGAATTGGCTA TAGCTCGTTTCTAGACTAGTGTTTCTTTCATAGAATAAAGTATTGGGATT TGTAGAAAATAACAGGTACCTTTTCACTATTTTACTCTGCAGGTTTCCAT ACTTGGTGTTCAGTAATGGAGGAGGAGCTTTCATTGTCCCCTACTTCATC ATGTTGTTCGTCTGTGGAATGCCATTGTTCTTAATGGAGCTGGCTTTGGG TCAGTACTTTCGTCTTGGACCTGTCACGACCTGGAATCTTGCATGTCCTC TTGGAAAAGGTATGAGATATTATTTTTACAGATATGCTTTTTTCAAACGT GCCTAAATCGATGACTTGGTTTCTGACAGCTCTAACAAACTGTTGGAAAC CTAGACTTCTTGAAAGTTACGTTTGAGTGAAGTTTTACCTTAATGAATCG TTAACGTCTTGATAATGCGGATACATCTTAAGAGCCCAGGAAAAGCAAGT GgtgttaaaaaatgtttgttaTAATTCAACATTCGCTTTCGTTTTATAAC TTCAGTACCAAGCACTAGCttgaaatgaatgaatgatATATACCAACCTC CACCCACCTTGAACTCTgttgtactaacttttttgagatttgaaattaga caccaccacatAGTTATGGGTCAGTACCCTGCGGCTGTATCCCCTTCCTC ATTATAAACATCAATACTTTCTGCTTTCAGGGATAGGGTACGCAATGATC GCCGTCTCCTTCTTATGTACCATCTACTACAACGTCATTATAGCTTGGGT GCTCTACTTTCTGTACGCATCCATGAAACCACAAGTTCCTTGGAAAAGTT GCTTCAATTCGTGGAATACACCTAATTGTAGAGAAGATAACCATAAACCG AGTTAGTGTTTGCCAGAAACTGTTAGAGTTAAGATACACAAATCAACTAC ATATCACATTTCTCACGATAGCTCCTCATTTTCAGCTTAACAGCTTGATT TTGTTCACTAAAGTTCCTTGGTTTACTATAAAATTGTTAtcaattttaga tattttaacaaTGTTTTCCTTTATCCTGGGACTTACGCGTTATATATATT AGTTTTCTTGACTGATCTTGACCTGTCCATCCTGAATTCCCACACTTctt aatttacttttattttcaaagagcTTGAGTGGTCATGCCCTTCCAGCAAT GGTACTTGGTACAATTACACAGTGGCCACACTTCCCAAGAACTCGTCATT GTGCAACAAATTCCTGGTCCACGAGCCAACCTCGCCCAGTATTGAATTCT GGGAACGTCGTGTTCTGCAAATTACAAATGGACTGGATGAAAGCGGTGAT GTTCAGTATGAATTGTTGATTTGTTTGGTGGTTGCTTGGATACTTGTTTT CGTGTGTTTGTTCAAAGGAATCAAAACATCCGGCAAGGTATTTTAGCCTA TTTTATCCACTTTGTGCAAAATCGCGTCGTTAATACGTCGAAATATCCTA AAGCCACGTATACTTTTTGcaatagttttattttattctttagGTTTCAA AACTTGATAAAGCGGGGGGGGTTAGAATAAAAATTTCCTGGGTGGgtgta aaatttttgaaaaggagactaatacagcagaataattataaagaaatata tttCATCAAATTGTTTGGTTTTTTATACCTATTTATCGCTATTTCCTCTG CAATGAAATACACACCTATGAGAATTAAATCGCTGATTCACTGTGATAAT CATTGAGTCGGGATTTGAGACAGAAATACTGGGTCGTCCCAGCTGTGCTC CTCCgtcaaaaagaaagtaaaaatacTTGGAAAATATAATAATATGTGCG CTCTTTCTCCTTTTCAGGTGGTATATTTTACAGCAACATTCCCTTACATA GTAATGTTTATTCTCCTTATTCGTGGCGCCATTTTNGTACGCATCCATGA AACCACAAGTTCCTTGGAAAAGTTGCTTCAATTCGTGGAATACACCTAAT TGTAGAGAAGATAACCATAAACCGAGTTAGTGTTTGCCAGAAACTGTTAG AGTTAAGATACACAAATCAACTACATATCACATTTCTCACGATAGCTCCT CATTTTCAGCTTAACAGCTTGATTTTGTTCACTAAAGTTCCTTGGTTTAC TATAAAATTGTTAtcaattttagatattttaacaaTGTTTTCCTTTATCC TGGGACTTACGCGTTATATATATTAGTTTTCTTGACTGATCTTGACCTGT CCATCCTGAATTCCCACACTTcttaatttacttttattttcaaagagcTT GAGTGGTCATGCCCTTCCAGCAATGGTACTTGGTACAATTACACAGTGGC CACACTTCCCAAGAACTCGTCATTGTGCAACAAATTCCTGGTCCACGAGC CAACCTCGCCCAGTATTGAATTCTGGGAACGTCGTGTTCTGCAAATTACA AATGGACTGGATGAAAGCGGTGATGTTCAGTATGAATTGTTGATTTGTTT GGTGGTTGCTTGGATACTTGTTTTCGTGTGTTTGTTCAAAGGAATCAAAA CATCCGGCAAGGTATTTTAGCCTATTTTATCCACTTTGTGCAAAATCGCG TCGTTAATACGTCGAAATATCCTAAAGCCACGTATACTTTTTGcaatagt tttattttattctttagGTTTCAAAACTTGATAAAGCGGGGGGGGTTAGA ATAAAAATTTCCTGGGTGGgtgtaaaatttttgaaaaggagactaataca gcagaataattataaagaaatatatttCATCAAATTGTTTGGTTTTTTAT ACCTATTTATCGCTATTTCCTCTGCAATGAAATACACACCTATGAGAATT AAATCGCTGATTCACTGTGATAATCATTGAGTCGGGATTTGAGACAGAAA TACTGGGTCGTCCCAGCTGTGCTCCTCCgtcaaaaagaaagtaaaaatac TTGGAAAATATAATAATATGTGCGCTCTTTCTCCTTTTCAGGTGGTATAT TTTACAGCAACATTCCCTTACATAGTAATGTTTATTCTCCTTATTCGTGG CGCCATTTTGGAAGGAGCATCCGAGGGTATCAAATACTACCTGATGCCTT CATTTGATAAACTGAAAGATGCCAAAGTGTGGGTGGCTGCTGCAACTCAA ATCTTCTACTCCCTTGGGATTGGTTTTGGTTCGTTGATCGCTTTTGGAAG TTACAACAAAGTCAATAATAATATTGTGAGGTAAAAAGTTCATCTCTGCT ACTGCTACTGTAATATCCTTTatcccgcatcagtaagattctagtgattt cattggtcaaaagacatcacgtggaggtgggatataAACCGTATCCTGTC TTCTTCGcgttcgattgagaaaaaaagaagacattgcatattgacgaatg cgctttcgaatgttttgttttgaaaagacttgaaatcgaaattgaaatgg TCGGGGTTGAGAAAGTCAACAAACAGGAAATCTTTGAAGTTATTTNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGAGA AAGTCAACAAACAGGAAATCTTtgaagttattttgatttttacttttctt gagtTTATATGGATACAACAAGACTTTTAATTGCGATGTTATAAAATGTC ACTCTCACGGATCCCACAAACTCGgcaagcctcgccaccaatacagtttt tactgaccctgtatatcccgtatcccacctcgagaagaccgtgtaactaa tatTATCCCGCATCAGTGAGATTCTAacgatttcattggtcaaaagacat cacgtggaggtgggatatGTACCGTATCTGTCTTCCTCACGTTCgattaa gaaaaaaaagaagacattgcatattgacgaatgtgctttcgaatgttttg atcaagattcgaatgttttgttttgaaaagacttgaaatcgaaattgaaa tggTCGGGGTTGAGAAAGTcaacaaacaaaaaatcttcagttattttgat ttttacttttcttgagtTTAATGGATACAGCAAGATTTTTAATTGCGATG ttataaaatgtaactttcacGGATCTCCCTTTCACTGTTTGATTTACTTT GTAGCTCTTTGTTGATGTAAGTATTTACTTGGATTTTTTCGTGGTTTTGG AAAAGATGCAAGGGACTTCAACGGGATAAATCCGTTGCACGCGGTCGTCT CGAGaagcctcgccaccaatacggttttactgaccctatatatcccgtat cccacctcgagaagaccgtgtaactaatagAATTCTTTACCTTTTCACCC AAGAAATAGTGAAAACTTAACATGTACTTAAAAGACGAACTTAATTAAGC GATTCCTTTATTTTCAACTTGTACATTTTTGAAGTCTGGcgataaatttt attttcaatccggCAAATTGTCCCCATCAAGAAAGCAAGAAAGAAGTTTC TAGCTTGTGGCCgaagtcaaagaaaaaaaatgtattagTACAAGTTTTGC CAGAAGCTAAGCTCACTCATACATTGATTATTACCATTTAAGTAATTCGA CCGTGAGGTGCTTGTTCGAGGAAGTACGGTAATTCTAAATATAAAGAACT TGCGTTTACGAGGGAATGACCCAAAGTTTAAATTAACCTTTCTCTTCATT TCATTTCAGAGATGCGATCGCTCTTTCATTGACGAATTGTATGACGTCAG TGTTCGCTGGTTTTGTTGTATTCAGTGTTCTTGGTCACATGGCGCATAAA AGCAAGCTCTCCATACAAAAAGTCGCAACCCAAGGTATATTACACCTCAA CCCCTTATTCGTGCAGCTCAAGAATCTATCTAATCTACCTGAACATACTT GGACAAGTAATGGTcgaatgatatttttttaaagatacatCCGATTCAAG TATATACCGAGACTCGTAGCTTTATAGAGTGTAATTTCCAAGACCATATA CTTGGACAAGTATTAGTCGaatgatattttttaaaagatacatCTGATTT AAGTATATACCGAGACTCGTAGCTTTATAGAGTGTAATTTCCAAGATCTG CAAAAGGTTAATCCAGAgactttaaattcaaaatttaagaattttcaaag caaCTTTAGATTTAAAATCAGACAATAACACAACatattgattttttgtt tcaggACCTGGCTTGATATTCGTGGTTTATCCAGAAGGCCTAGCCCAGAT GCCAGTCTCCACTCTGTGGGGCGTCTTATTTTTCTTCATGATCCTGATGA TCGGGTTAGATACGCAGTTCGCCATGCTAGAGGCTGTCATTGTTGGCCTG TCTGATGAATACAAAGTACTGCGTCAGCATAAAACTACTTTCATTTTCGT CATTTGTTTATTAGCTTTGTTATTTGGCATCTCCATGGTTACTCAGGTAC GTTTCATTATACATCCAATTTACTCTCTTTTATTCAAATCTTCAAAGACC AggaattttccttaaaaaggtAAAGAGACATAAGTTACGTACACTTCATC ACTTCATTATGTCAGCTAAAATTTACTGACCTAACCTAAACAGGGGTGTG AACCTAAACAGGGGTGTGATTAGCTGTAGTTTTTTAAAACCGGGTGAAAA AGAGTCTTCAATGAATTAGTTTATCAAGTGATGGGAGATTAACATCTCAG CTAACTTTGCATTTTTCAGGGCTAAAGAATACTGTTCTAGACACTGCtgt tcaagttttattttttaaagtgtAGACAAATTAGTATATCAAGCGATGTT AAAATTAAAACTCTGCTCCAAATCAAGCATTCTAaattaaatttatattt ttcagggtggtatgtacatcttcaacattttcaactggCAATCAGGGGGC GTTTCCCTTCTCATTCTGGCTTTCATAGAAGTTTGTGCTATATCTTACGG ATACGGAGCCGATAGGTTTGAAAAAGACTTGGAGTTAATCCTGGGAAGAA AACCGTCCCGTTGGTGGAAGATTTGTTGGAAATATCTTTCGCCTTTTGTG ATCTTGGCAACGTTAATTTCAAGCTTGGTGCAATGGAAGGGAATCAGTTA CAATGGGATTAGGTGAGATTTCTCTAAGCTTAAATTTACTCTTtatccat ttcaatattttctaacTTTGCACGGTAGCTGTTGAAGGATTATTTCTTAC TGGGACACTTCTACTTGGACCTTTATTCAACGAAAATCATTTACGATCAA TTTTGCTGGTTTTTGTAAAACCTTGTACCTTTAGCCTTTCTATTGAACGA TATGAATTTTATGATAGCCCAATGTATTTAGTGGTCTTACAGTAATGTAG CTTTTTGGATTTACATATAGAATATACAGTAgtgtttctttaactcgaac ctctgttACTCGAAtgcctccttaactcgaacaagttttctcgtccttca attaacaatgccttatataTCTTATTCAATAAATGGAAATTTgcttaact caaacaagtttatattccccgtgcgtgttcaagTTAAGGAAACTCCACTG TACATTaaagtctctttaactcaaagttctataactcgaatttctccata acttgaactaattaacaatgccttataaaccctactccataactcgaaat ttcctaaactcgaacaaatttgtgttccccgtgcgggtttgagttatgga gattccATTTTACCATCTTTTTCAGTTATCCAGTGTACGGTGAAGTTATC GGATGGTTCCTCGCCCTCACGTCAGTCATTTGGATTCCGCTTGTCGCTct ctataaaatgaaattctctgCTTCTGGTTCAATATGTAATCGTTTACGTC ATCTTTTAACACCCAATATGGCGGAATTGCGTCAGGTTGCCCTGGACAAT GGTTTGAATACAAGTTTTGATGCAAATGCTTGAAGTCTTTTGAATGCTAG AGACGTAGTGCGATTCGGAAATACCACCTAAAACTAACTACTATAAAAGG CAATGTTTTTCAAGCCTGTCGTCGATAACTAGCTACTATGTAAGACAATA CTCAAGCAAAAACCAAGCTAAATACCGTTTATGAGAGACTTTTCTGGTCA CGTAGACCAAAATGAAGACACGTATCGATCACGTCATCGAAAGTTAAAAT ATTCCTACGCATATTATAAGGAccagttttttttttggacaatgccgtgt taataaaaattttgtttgtcATTATCCTTTGCGTAGTTTACTAATTCCTC GAGATTCTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064731TCONS_00064731Clytia hemisphaericatranscript
TCONS_00064732TCONS_00064732Clytia hemisphaericatranscript
TCONS_00064733TCONS_00064733Clytia hemisphaericatranscript
TCONS_00064734TCONS_00064734Clytia hemisphaericatranscript
TCONS_00064735TCONS_00064735Clytia hemisphaericatranscript
TCONS_00064736TCONS_00064736Clytia hemisphaericatranscript
TCONS_00064737TCONS_00064737Clytia hemisphaericatranscript
TCONS_00064738TCONS_00064738Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064735-proteinTCONS_00064735-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_423supercontigscaffold_423:214453..225163 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23 0.24 0.14 0.22 0.13 0.17 11.89 13.93 14.63 12.65 14.19 10.14 1.6 1.63 0.43 0.53 11.59 13.49 5.69 6 15.05 16.56 4.79 8.36 10.98 12.21 0.32 0.49 0.12 0.06