XLOC_040580 (gene) - C. hemisphaerica

Overview
NameXLOC_040580
Unique NameXLOC_040580
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_421:66184..69220+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040580 ID=XLOC_040580|Name=XLOC_040580|organism=Clytia hemisphaerica|type=gene|length=3037bp|location=Sequence derived from alignment at scaffold_421:66184..69220+ (Clytia hemisphaerica)
AAAAAGGGAGCCTTGAAGTGAAGACCAATCACATTCACTATAGTTTACTT CAAAAACCAGAGCGAAGCACGTCTAACCATTTCCAGGTATGTAAGTAGAT TTAAATAATCTTCATTTGGTTATTTTACAACATACAGTGTGTCCAAAAAG AAGTAGAGAAATTTttacataaaataaaatctttaaaactttatCTCGGG CTTATGATAATTGTAAAAAGATTAGAATTCTGTGTTCAATTAATAGATAT TCATATCCATTACCAAAGATAATTGAAAGGTTTTGGAGATTGAAATATTG TGTACTTATATTGTATACTTTTGTATTGGATTTTACTTtgtataaaagtt ttttttgggacaccctgtatttagTCGAACTATACCTTTGATAGCTTATT AAATAGTTGAAGTCAATTGATGGGCACTCTAAGTTCTACGACTATTCAGA CtttccaatttctttttcaatctcTAACGATTGAGCTTTTTATGGTCAAT CAAGTCAAGGTCACTTAACCCTTCGGTCTTCCTATTTTTTAGTAGGGGAA GCATCTTGGGGGGTCTTCCTAAGGCTTCCCTTAAAATCTCAAGACTGACA AGTGCTATGACCTTGAAACTTTGACCTGTGGTAGATCATGgataatcaaa aatgatttgcaaaattttagttCGGTCACCTGTCAGAACTTTTTGCTCCT CCCAAGATGTTCGAAGGGTTAATAAATCTACCATTGGATTATTAATATTg agtgagaaaaatatttccaggATCATCTCTGATCATGTTTGCTTTCGATT GAATTTTTAGGTCGCTTTCAAGATGAGATTTTGTTCATGGACAAATCTCT TTCTACTCGGAATCACGTGTCTTTGTTTGACCAATGGGATGCCAAATAAA CAACATGTTAGGAATAAGAAGAATTTGATAGATAACACCGTGAAAATGGC TGACCATGGAAAAACTTTGGTAAAGAAATCAGCTCATCctatgaaaatca aagatgtttcgaaaaaaagtaCTGGTGGGGGATCAGATATAGCGAATTCC GATGACACTTTTGACCGGGCTGCTGATGGTACGGATAATTCACTTTACGG AAGACAAGAAAAGGAACAAGGTACCGAAAACAGTGGAGTTGGTAAATTTG AGGGTCCACCTTGTCGTTGGGGATGTGGTAAAAGAGAGGCTGGTGTTGAT GGAACCCCTGGTCGATGGAGTGGACGGAAAAGAGGAATGCGACGAGTAGG ACCCCCTGGCCGTTNATATTGATGGACCCCCTGGTCGGTGGGGTGGACGG AAGAGAGGAATGCGACGAGTAGGACCCCCTGGTCGTTGGGGTGGTCGTAA AAGAGGTGAATTACCGGGTCGTTGGGGAGGCAAAAAGAGAGGTGAATTAC CGGGCCGTTGGGGAGGCAAAAAGAGAAGTGAGTTACCAGGCCATTGGGGA GGCAAAAAGCGAAGTGAATTACCAGGCCATTGGGGAGGTAAAAAGCGAAG TGAAATACCGGGCCGTTGGGGAGGCAAAAAGCGAAGTGAAATACCGGGCC GTTGGGGAGGCAAAAATCGAAGTGAACTACCGTTGGGGTGGTCGCAGAAA GAAGGAAATCAAAGACCACCATCAAAGGAAACATGAAGAACACTTGACCA GGCAAATGAAAACTATCCAAAAGAAAGAcgtttgatttgaaaaataaact ttgtaTCATTGCAATCAACCAAATAgtaatatttagaaaaaaatggcatt tAGCCTAAATATAGTGtatttttttagaattaaaatatgcaaaaatttaA CACAGCGTCAAATCAATCTGGATACAAAGCGTgtagttttttggttttta catgCTGTAATGATCATTATAGGTTGaggaaaagtcttttttataaggat aatTTCATAAGAGTaacgaggctcaaaatgccaaattataagaataattt aggAACAATCCTAAGCCTGGAATGGTTTTTGAACAAATTAACTGTCAAAT TGGAAAAGTTAAGGGGGTATTAGATTTGATAGAGCATGGTGCTCCCTTGT CATGACATTATTATTGTGGGATAGGAATTAAGCTGTGAAAATATTCTGTT CATTCAAGACCCAGAAAGAAGCTTTGATAAAATTAaatgtaaaattcttt aaaaggaCTACACTTGGAATTGCAATAGACTTGGCTAAAAACGAAAGTAG ATAACCATCAAACTATGAAGGTACTACGTTACCGAGAGGATGGGTAGGCA AAACTTCAGAAATATCAACCTATATCATCAAATATTGGTCAAAATTAAGC CGAATTTAtcaaaattcggaattccagaggggtatgatcctaaaatttcc tggaattccaagggggtagttcacaaaaggttggagctcttcaacagggg gtgtacggtttttttctggaaaagcccatttcaagaatttatgaacCTTT GAGGGATCAGTtcttaaattcttaattataacacccctgtttcacaaaCC CATTGGGAACCCacccccactggaaaatttggcaataatttcgtccccgg tgagaAAATACCCTGGGATTTCGgccccacttggaaattgactttgagtT AATAcacactcgaaattcaatgtttaaattGAATTCTCAAAACATCCCAC TGGGTTTTCTAACATTGGAACAATggaatttctatccctattgggatttc aatagaaattttatctccactgaggaaaaaagttccatcggggctgtgag ataggggtgtaTTATAAAACCCTAGAGACTAAATGATTACTTTTTATGGC TCGCCAGACCCATCATGCATTTCATCTAAGTGCACCCTGGGTCCTAGTAA ATTATCAGATTGAAAACTTCTtcataaagaaaataaactaaaaattacaa aacttgAACATTTTAATAAAGATAAGGATTGATAAGTTAACATGAggata aatatatttttcaaaatttgaaaatgaagttgtaaaaaaaattaaacgaa aagtttctttttgcggtatattgaaaagataaaaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064694TCONS_00064694Clytia hemisphaericatranscript
TCONS_00064695TCONS_00064695Clytia hemisphaericatranscript
TCONS_00064696TCONS_00064696Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
pp7 precursorTCONS_00064694-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_421supercontigscaffold_421:66184..69220 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.02 0.02 0 0.12 0.1 2.39 3.56 16.55 15.01 7.9 10.86 5.37 3.84 0.05 0.02 2.94 2.03 11.79 12.54 10.61 12.13 1.34 5.03 7.77 9.13 0.17 0.13 0 0.02