XLOC_040461 (gene) - C. hemisphaerica

Overview
NameXLOC_040461
Unique NameXLOC_040461
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_418:218096..226091-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040461 ID=XLOC_040461|Name=XLOC_040461|organism=Clytia hemisphaerica|type=gene|length=7996bp|location=Sequence derived from alignment at scaffold_418:218096..226091- (Clytia hemisphaerica)
CTGCCATTTTTAGCCGTCATTTTGATCGAAAGTTGAAGGCTCATTTGTTA TTTACAAAATACTAATGAGATAAAATTCCGCTACATCATCAATTGCGTGT TAAAGCGAATTGTTACCTCCATAATGTTTAAAAACTTTCGGGACATTTCG GATTTATCGGGTTTTAGTTGCAGAGATCTCAAAAAAAATTTAAAAAGTTG TGGAAGTTTTCAAAAAATCTGGGATTAAAACTTGTAAAACTCAGAGAAGA AGAGACTTCAATGTTCAATATGGTTAAATCAACTGACTCCAATGAAGAAA AGAAAGGTTTGTTTTACAGCACATTTAAATGTTTTGTATAAATTTCTATC AGTCTATCTGTCTATGGCAGGACCCTGCCGGTTGTTATAGCAAACGATAT CATACTCCAGGATGCAAGTGAAATTTTTCAATCCGCGGACGTAGACGGGG GTTCGGTTATTATCAGTTAGGGTTAGGGTTGGAGCTCAANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNCACGCTTTTAGCCTGAGACGTCCTATCTCATTT ACACTGGGTGATGAATACCCCATGCAAATGCTCACCCCGTTCATTTGCCA GGATGTGCCTGACTGACACACTATAAGTTAGCCTGGGAATCCAAGCGTTA AACTTTTTTCACAGTCTAGTTTATGATATTTTTGCTGCTGGTTTAACGCT TGGCGCAGGTAACTCGCGTGCAGGGACATTTTTCCCTGCAATGCAGGTTC GGCCTGATTAGCCAGCTTTCAGCGTATTACTTNGACAATCTCTACACCGG ACTTAAGGAAGTCGGATGTCCGGTGTCGGAGAAGGATATTTTTTTCCACC GGACAATCAAAACACCGGACATGACTAGTCCGGCGGCCGGTGTTTTTTAA TTTTTTGTTTCATAAATGTCCGGCGTCCAAAATTCCCTGTATGCAACACA CCGGACTGACACCGGACTTATCGCGTCCTGTGTAGCGAAAGGATACTTTT TGCCACCGGACAAATACACCGGACAGTCTGGTGCGTCGTAGGGATCCTAT GTAGGGGCACCGGTAGGGTAGGGAGCTTTCTTAATTTTTAAAGGTCTGTA AATTACACACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNCAGACTAATCTACCTGCACCAAGCTCTATAATTTTAGAA CTTTGTGAGGTGAGGTATTTTTTGTTTTTTCTAAAATTATGAGCTTGGAT TCCCAGGCTAACTATAAGTATTTGTGAACGAGAGCTTTTTGTTGTGTCTC GTTGGCTCAAGCGGTTAGGTGTTGGGTTTGTAAACCAAGGGGCCATTCCA GAATTTGTCTGTAACAGGGGGGCGGCGGAAGACACAAGATTTCCAAGGGC AAAAGTTTTCACCAAAATTCGAAATTTCCAAGGTGAGAGAAGAAAAAATG TATGAATTTCCAAGGCAATTGAATTAAAAAAGGCAAAAAAGAGTGGAATT TCCGATGCATTTTGGAAAAGTACATAGATTTTTATCGGAATTTCCGACCA CCACTGGAAAAATTATTTCCGAGGCTAGAAAAAAATTTAAAATGCACGTC GTTCGACGGGGGGTAACAAAAATTTTTTGGAATGGCCCAAGGTTGCTTGC ATTTGGTGGTTCGAGCCGGGGTCGGAGACCTGTTTCAACGGTACGGGCAA ATTTCAGAAAAATACTTAGAAAACAGTTCAGAACAGTTAGAAACACTTGA GAAAGACAGAAAATCAGAATAGAAGATAGGAAAGTAGAAAATAGAGGGAA AATAAGAGACGATGCATCCTGGAGTATGATATCGTTTGCCAACCGACCCT GCCGACGCACCATACTGTCTGGTGTATTTGTCCGGTGGCAAAAAGTATCC TTTTTCTACACTTAGACGCAATAAGTCTGGTGTCAGTCCGGTGTTGCATA CAAGGAATTTTGAACGCCGGACATTTATGAAACAAAAAATTAAGAAACAG GACGCACCGGACTGGTCATGTCCGGTGTTTTGATTGTCTGGTGAAAAAAA ATATCCTTCTTCGACACCGGACATCTGACTTCCTTAAGTCCGGTGTAGAG ATTGTCCGGTGTTAAAAAAATTCTCATTTTACATCGGACTTTCGCGTGTA CTGTGTTCGTTAAGCCCGGTGCGTCGGCAGGGTCCTTTTATGGCATGGCA TGGTTGCCAAGTTCCAAAATTCGCAGTGCAGTGTGGAAGCGATGCAAAGT CCATGCTGAATTGTTATTTGATTAAACTGAGGTGCACGCCAAAAGAAGTT CCACTTGCGGAACAGCACCCACTGTAAGCCCCCAAACGGGTCCAGGGCTG AGACCTGGTGGGGGTTCCGTTCAAGGGTAAAGCTTCTGAGGAATTTGAGC TTGTCTACCTGAAAGTTGCTCAAAATTTGTGGAAAAAGAGCTTGAATAGC TGGTACTTCTAAGAAAGAAATGTATGAAGCTAAATGGATCATGACCCTGA GCAGTAGCGTGGTGGGTCGACTAAAATTCAGGCAAACTGGGGAGACAAAT TTTAGAAGATTTTGGATTTTGGCACCCCCTATCTATCTATGAAAAGTAAA TATTTTTTTAAAAACAACGCAATCAAAGCGAGCATTTTGGGTATTTTCTC TCTTATTGGCCGGAAACTGCCATATCTTTAAGGTGTAAAAGAGCAACGGG GAACCGAAATTAGTAATAAGAGGCGTCTTTTTCCAGACAATCTCAATCGA ACAGAATCAACGATCGACCAGTCGAACCAAATCGAACGCAATCAACCGAT TGAAATTTGATTGTCAAACACAATCGAATCTCAATCGAACGTCAAAATTG TGGGTAATATTTGATTGGTTCGATTGTTGTTCGACTGATTCGATTGTCGT TGTTGTCGGGAAACGTTGCCCGGTTCGGGAGCATGTTGTTGATCGGACCA TACTGCTTTCTAATCGTCAAAACAAAGATGGCGGCAAAAAATAGACAATC AACTCCAGACGATCTCAATCAAACGCAATTGAACACAATCGAACGCAATC AAGCATCAATCAAACGCAATCGAATATCAATCGAATCTGAAAATTGCGGT AATATTCGATTGAGATTCGATTGCGTTTGACAATGGAATTTCAATCGGTC GATTGCGTTTGATTTGGTTCGACTGGTTCGATCGTCAATTCCGTCGATTG AGATCATCTGGCTTTTTGCACCCTTTGAAAAATCTCCGCTGAGGGGCATT TGCCCCCCCCCCCTGCCACCACGCTACTCTACTAACCATGAGCCATGTTT TAAAAATCCAAAGTGAGTTGCGTTATTAATTCAAATGAGTTGAACACCTA TTTTTTACTCTCTTCGTCGTTATGAAATCGGGCTTTAGAATGGCCCTGCT CCTCTCGTTCGTCTTGAAAAGCGCCAATATCTTACTTTATATTTGCTCCT TACGCCAATACTCTAAAAGTAATTACTGCCTCACGCCGAATATATTCGGA GTCCTGTGCACTAATTCCAGGCTGGCAAAATTCCAAATGCAGGATCAGAT GTGAGCGAAAAGTGAGAGCAAAATTGAGCTGGTGATTTTAGGGGGCAGGG CCCCCTGGAAGAAAAGTTTTAATATTGAATTGATGGGGAATTGCAAAAAC ATATCTAATATTTTACTTTTTTTATCATAATCAATGATTTTCCTCATGTT CTTTGTTGTATTTTGTCTTTTTGCTTGACTGTACTTTGAACGTAAGTCTA ATGAATTTTTGAAAATGCGGGACACACAGAGGATGCGGGCGTACAGTGGG ATTGAAGGTCTATTTGCATACGTGACCTGCAGGATGCGGATCCTGGGTAA TATCCTATTACAATTGGATTGCGTTAGATTTAGACTGTAACATCATTTGT TTTTAAATTCTATGATTAATATCTATATATTAATAGCAGTAGTCTGTCTG TCTGTTTTCTGTCACTAAGCAATGTTTTTTTTTGTTCTCGATAAGTTTGT TTTAATTGACAGATCAGATAGAGCCTGGTTTAGACTTTATTCAGCCTTTG TTTTGAAATTTAAGGCCCATCTACATTTAGTGATTTTAATTTCTGCCCAG GCTTGCCCACCACTCTTTTCTTTTGTTTTAAAGGTTTTCAAATGTGATTA ACAATCGTATTTATTAATGACATTCAAATTCTTTTCAAAACAAAACAAAT TCCTTTTATAGAGAAGAACATTTCAAATGTAAATCAAAACATAAAATAAA AAAGTTTGTTGAACAACAACAGCATTCAAAGAGCAATAAAAAGCATGAGA AAAAAAAGTCCACCTCTTTCTTCATATAAAAACATTTGAGTCGCCGTTAC TGTTAAAAAGTGTGTAAGACATTTTGCATATCTAAATTCGAAAAGTTAGA TATGACAAAGGGTTAAAAAAAGCAATTTTTTATCGTCTTATTATTTTTTT TAATCTAATAAAAATATAGAGTTGTTGCACTATTCTTTGTGGCTTTCTTT CCCGCTTTTTGATTGTAAAAATGTGTACTTAGCTTGAGGCTAATTAATTT CTACTTTTAATTACAAATCCATCTAAAAGGTTGATACTCAAAATCAATTA TTATTTACAAATTGATTTAAATTAAATTGATAAAACCAACGCCACAGATT TTGAAAAAAAATCACTCTCAATGTTCTGATTCTATTTTACTCCTTAAAAA TTTGTAAAAATTCTCCTTTTAAAAGGTATACATAATGTTTATTAGGATGA ATTCTTATAATCAATTATTCTCCTTTAGAACCAACAATGCGAGTTGGAGA TGAATTTCAAGCTGAGGTACCTGACGTCTTACATGGTGGGTTGCTTGCGG CTACTGGCTTTAATTTAAACTTTATTCTGGTTNTGAATTTCAAGCTGAGG TACCTGACGTCTTACATGGTGGGTTGCTTGCTTACTTTATTCTGGTAACA TTAAAGGTTTTATGTATCTTAACTGATCTTAATTGTTGCTCATATCATAT CAGCATCATTGGTGGATAAATTCTATTTACTTCTAGTTCAGCAAACTTCA TAAAAATGAATGATTTGTGGTTTGATGAACTTGAAGATCTTATTTAATAT TCATGTTTTTTTGTTCAGATTCCTCATTGGATAAAGATCATCGTCCTGAA CCACTTCTTGTTTGGGCACCCTGTGAAAATGTATCTGATGAAAAAAGTAA GAGTACATGAATTGGATTTTTTAATGTTTGTTCTGTTTCGTTTATTGGAA TTCTCTTGTATCTCTTTTTATTCTACTTTGTGTTAACATTTTTCTTTCAT ATAATTATATATAAAGATTATGAAAAGGACCAAAAAAATATTTCCTGGCC GCCTGTATTGCTTTTTTTTCGTCACCGGTTTTACTGTAGGGCAGGCCTTA TTTCAGACGATTGTGATTATAGATTTTAATGTTATTTTTTTCAGTGGATG AATATTTACGAGTTGCCAAAGATAAACATGGCTACAATATGGAGCAGGTT GGGAGAAAATATTCTTTTGTAAACAGCTTGCAAGAAGTACTAATTAGGAA TCCTCACAATACACAAAATTGGAATCTTACTTCCACTTAAAAAGAGACTT TCTTTAAATATGCCAATAAATATGGGCAAGTGAAAACCAATATAACACTT TTTATTAGTCGTCGAGACCGTAATTATTTGTTATTTTGAATAAGAAGAGA CTATGATTATCCATATTTATCTTATTTACAGGCTTTAGGACTGCTTTATT GGCATAAATATGACATTGACAAAACATCTGAAGACTTGAGAAATTTCACA CCATTACCTGGTAAGTTGGGTTTGAACTTTCAAACCTGGGTATCCACTGA AAGAAAGTAAGTCCGTTGCAAGTACCTGTTGACAAAAAATAAATCCCGAC AACATCCAAACAGATTTTTTTTGCAACAAATAATTCATGATAAACTTATT TTTTTCCGTGGACACCCAGCTTAATCATTTTATGAGATTAAAATATCAAT AAAAAGATTTGGCTCAGCCCTATCATGCGCACCTTTCAAGCCCTACAGCA CTGTCAGTTGTGATTGGTTAGGAGTTTACATGGAAAATTATTTCAAAATG GGAAATTTTATTGAAAACACAAGCATAGAAGGGCCCCTTCACCCAGTGGG GTGAAGTAATGTCACTTTAGTCAAGCTTGTTGGAATACAAAAAGTAGTGT GCAATCTGTTGTTCTAGAGAAATCCCAGGGGGGGGGCAGTCAGGCAAATT GACCGATGGGTATGTGCGGCGGTTAAGGGTATGTTTTTCAAAATATCAGA AATGCCCTGTAAGGGTGGACTTTTGATAAATGCACTGTATGGGTGGAAAT TTCAGCAAATCTAAGAAAAATTGCAAATTTTTGCTCGAAAATCTTGATTT CTTTGCTCAAAAAGAGTTTAAAATTTGAAAAAAATGCACTGTATAAGAGT ATAAATTTCACTGATTTTTTCTGCACTGTAAGGGTGCGATTCTAAAAGCC AATTTTTTCGTTGCACATCCCGTCAGTTGGTAAACCCGCTGCCCCCCCCC CCCCCGGTAGAGAAATAAATTTTTTTAACTTAGTTTGTTTCATATATAAC CCAAAATTTTATTCAATGAAATAAAAACCTAAGTGCCCAAGTCATTTCTT CACTAAGGGTTTACATACTAGGCATACTAGGAGATTGTTTGGAGGCCTCA GAAATGTTCTTGTGGCTATCACAGTTTAAAGAGTCTGAACTAAAATAAAT CAAAGTTAATGTTGTTATCATTTAGATGCATGGAGCATGGAAGATCAAGT TATATTTGAGCAATCCTTTAGTTCCTATGGAAAACACTTTCCTCGN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064516TCONS_00064516Clytia hemisphaericatranscript
TCONS_00064515TCONS_00064515Clytia hemisphaericatranscript
TCONS_00064514TCONS_00064514Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064514-proteinTCONS_00064514-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_418supercontigscaffold_418:218096..226091 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.98 9.62 7.08 6.13 78.33 58.7 63.39 63.4 35.77 41.17 34.12 29.39 21.76 21.02 20.96 25.65 31.42 26.84 12.02 13.78 22.33 20.42 35.58 31.34 37.06 34.34 13.19 12.14 22.69 25.98