XLOC_040446 (gene) - C. hemisphaerica

Overview
NameXLOC_040446
Unique NameXLOC_040446
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_418:102383..112058+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040446 ID=XLOC_040446|Name=XLOC_040446|organism=Clytia hemisphaerica|type=gene|length=9676bp|location=Sequence derived from alignment at scaffold_418:102383..112058+ (Clytia hemisphaerica)
ctaaaattgattttttaattttaggagttaaaatcgatggaatcactaaa tttcagctcctaaaattccagattgtaagctaaaatagatttgtaaatat caatcgttttccaaaactaaaaaataacgtgcaaacatacccttataaag agatttctatctaccatcagattttgagaaactgtttttacgaccaataa tcacttttaacaaagggactctgaatagatgatgaagtagccaaagtgag atattattctatctgataacagttcactggtaatactttcgctaaggcga aattgataaaataattatctGAAGCACTATATAACATCAAAAATTCTAAC GTCAAGCCACCAACCATATAAATATATATGACGTCAAATAGTTTTTGGAA AGGAACTGTGAATTCTTTCCAACTTTTCGTGAGAGAGGGAAGCAAACAAT GGCGTTGAGTTCTCTGATGAGAAAATGAGCACCTGTGAACGGAAGGTACC TCAAGATAGGTGAGTaatctcgggtacctaatagccgagGGAGGgggccg ctaattaattttttagaaaactttccacccaggacattcttattccaaac cgcttattgatttttgggaaatttttttgaaagttccctcttttgcccta attctacTGCATTAGCttctttttcgaagattttccaACCAGGACATTTT CATTCCAACCCCcggcttattaagttttgagattttttccaaaccctccg cttattccaaccccccggctattaggtatccGAGAGTAGACATATCAAGC GTTAGGGATAATTTTGATAGTTCGAGGCTATCGAAGCCAAAAATTGTTAG AATATAGGGCTTTTTGAGTTTGCTACCTCTTAGCGAAATCACGAAATCTT AGTTTTTCCCAATATAACGGGTGTTGAGGAGCAGACCCGAAATCCTTAGA AAGGATGTTAATTtggaccatgttcagacgttacggttccgtttcaTCGC Tccaaaacgaaacggttccgaaacaagcgtgaacgtcaaaattcgatacg tcaaaaaagaagacgttacaaagcaaaacagatcgaaacggtttcactcc actattttcatcagAACGGAACTGTTCCGTTTTCTTgttccgaaacgttc cgaaactaatgtgaacactctcgatccgtaacgaaaatcacaccggagcg aaacggaaccgtaacgtctgaacatggtcttagaccCACCACAAAGACAA TGGGAATAAAATCTACCAATGTCCATGGAACATGTAGAGCAAAATTggaa gaatttcttttttaaaacatacaaaTGTTTTCCTACAGGTTCCACATAGC ATATCAAATTTTCTATTTACTTGGATGCACGACGCTGTTGCCATGGAATT TCTTCATCACCGCCAACGCAGTAAGACATTTATTTAAAATCCTCTCTTTT CTGATATTCGCTATCTTGTATTGTACTGTGTAGAGAACTTCTAATTTTAA TGGTGGATACTAATCTCGCGGTCTTCTGGTCAGTTGAAATATATATGTGT CATAAAAAACACAACTTGTGATTCTCTGTCTGACTGATAACTTTAAAACC TTTTGATATAGAAAATGAAACTggcatcatcaaaattttttaaagcaacC TCAATTTTACCCTATTTCGATAACCTCATCATTGAAAGAAAATCTTGAAT TATTTCAAGTAGGCAACAGCTTTTCACCTTTAACAGTGTATAAcaatgaa agaaaattctttttttttttgggttgGTAGGGTCAGCAAAAATGCAAAGT ATTCATTTTTACTgaaatatgctgacgtcagcaattgttttttctttatc aaaacgcttcgaaaaaaaacttatgGCAAAGGATGGAACCTTGACAGCCT ACTATGATAACACAGTGCTAGGTCATATTCGTTTTATTGAAATTGTGGAA CAAAGCTGGGTCAGGCTTTAATATCAAGGCTCAATAACAGCACCTATAAA TACAAATTCGTAGATCAATGACATCATATACTGCTCTCTTTCTTATAGTA CTTTTCAGCCAAGTTGAAGAACAAGCCAAACTTGGAGAGCACTTTTCAGA ATTATTTTTCCGTTGGTTCGATGGGGCCCAACATGTTCATAATGATCCTT AACGTCTTCCTCTTCCACAAGTAAGAAAATTTGAGTTTATCGGATTTCAT TTAGCGTACACAGTGAGAAAGCTTTTTTTTGACCTCATCGAATTTCTCGA ATTATAGAGAATAGCTTCGTTCGTTCTCATTCTACGATAGATTTCGAACA AAAAAAATGAGCAACGCCCTGATTATAGGGCTCGTCATTTTAAAGCGATT TCAATCAATTCGATAATAGTTTTCTCAAGTAAAAAATCGATACTCTTAAT CGATGAATGCATCCACCTTATCGGCGGAGTGAGTCGCTTGAAATATGCTG TATTATTATCTCTTCAAAGAAGGTAATTCTGCAACGGAAGACaaattaaa gatttatcaaaaattggaaaaaatattcTATCATCAATATCCCAAACATT TCTTTCTTTAGATGTTCTCGTTTTGTGCGGATGGTGGTTTCAATATTCAT GTTACTAGTCTCATTCACAATCACTGCCTCCTTCGTTCTCGTCAATACAT CCACTTGTAAGTACAATTATTACGTCCCCGTATTACCGAAACTGGAGGCT CTTttttcgatagctgtctacccaaaggtagggagGGCCATTTCAATACC ACTTTTGTAGTAGATACCGCGAGCTTAAGGGTATCAAACTCAACTTGGAA TAATAATCATGAAATAACTTCATTCCATTATAAAAGGTAAAATAGACGGC AGGAGGCTTGGAAAACAACAAGAAATATTCGAGTTTAAGGCTAGAATATG TTTGCAATACAATACGATTCGAGGGCCGGAATGGGTCAACTGCCATCTAA GTTATTGAGGCGAAAATGATGTAACATGGGACACCCAGAAAAATTCGTTG CTTTGAAATTTAGTATTTGTATTTATTATTCACTTTCAGGGACAGAAGAA TTTTTCATAGCAACAATGATTATTCTAGTTCTCATCTCAGGTAAGTcaat actttaagggcagaaactttcgcgggcagaaactttcgcgagaccGAAAA GTCGTGAAATTTCCCGGATttaaatttcgtgatttttactttttgaagaa aatttacggaagaaaatttcgcggttttttgtgaatgttaaattttaata actttcgcgagtggctagggaaagtgaataaagattatttcaaatctcat ttttttcttcaatcgaaagagtgatatgctaataaatgaaaaataaacta tttgcaCTTCTTCCTTCCATTCCGAATCCTAGTCACTGCGCTAATATCGA CTCTCCTCGGcttttaaaatttggaaaaaactttcgcgatttttgggaaa atttcatttttcgcgaaattaactttcgcgaatttcttgtttaatttcta acctggcagaaactttcgcgaaaaaatgccaaaaacgcgaaaaacgcgaa tgtttctgcccgcgaaagtttctgctcttaAAGATATCATTCGAGTCATC AAAGAAAGCCTGTCTAATCAACAAAACACACTAAACACAAtaaaagtttt cgaataaaAGCGAAACTTTGAAAGGGAACTCTAGTAGCTAATTGAGGGTT GTAGGAATTcgataaaaatatttgacgtcagaaatgaattcatcaaattc aaaaagtcattaCGTGAATTTATACCACGACCCACGGTATTGCCCGGACT TTTTCGGGCCACTCGAATTGGCCTGTCCATGTTCGGGCCGGGTCGGTTTT TTTGGCCTGAACTTGGCACCAATGTTCATCGAGtcaaagaatatttttac tattttggcCTGAATATGACCTGAAAATGTTCGGGTATGTTCGGGCCATT CCATGGTTCCTTTTTACCTGACGCGTGAAGCGACACGGAAATGCAAGTTA AGGAAATTGGgttacaaaaatacaagaaGTGGAATCcactttttcataat tttctcgaaataacttgaaatattttataacattttctTCAGGATTTGGT GCTATGTTGCAGGGTGCATTGTTCGGGCTTGCCGGGATGATGCCACCACG ATATATTCAAGCAGTGATGGCTGGACAAGGTCTTGGAGGATTCTTTGTTT GTATTGTTAGTATCTTGTCTTCTGTAGGTAGGTGACTTCTAAGAATTTAT TATTTTGTAATCTTCCAAAACGAGATTAAACTATTTTGTTGGATAAAATC AACGATGAACAGATAGTTTCTAGGCTGCTGTGTCCACTAACAGACTCGTG CTACTTATAGACAATACTACCTGTGATTTTATAGGttttatagaggtctg cgattcagaatAGATAGTTTAAGAACGATAAAGACTCTTGTAAGCATGGC CTTATGGCCTAAACAAGtcttattttgatttgtttctttTAGTATCGACT AGGTACCAAACATTAGAATTTGGCATAGATCACACGCTTATAGATATGCC ATGTGTAGACAAAGATACAGATCATAGAGATCATCACATTGGAATTTaat ttcttaaataaaaaaaattgaatcttgTTTAGGTGGTTCAAAGATTACGG ACAGTTCTTTTGGATATTTTTGTACTGGTATATTTGCAATGATCATCTCA CTGCTTGCCTATGTTTACCTTGAACGACTGGTAAGTTAACGATGACAAAA TAATGTTAATTTTCCAATAGTTGACAAGCcacttttaaagtaaaatttaa atCGATAGGCCGCTGATTGACgcacaaaatattcaaaataggTCAGCGTC TTCTAGTTATTatcaaagacaaaataaccgATTTGCCAGATTTCCCTGAA ATCCGCCGAATTAAGTCCCcgctgaaaattatttttgcgcCATAcaccaa attcaattttttccatACATTCTCCAAAGTCGAACTTCTCGCCTTAAAAG AGATTATTCTCTCATTCAATAACGATTCtcggccaaaaatatcctgtaAC CGCAAAAGTAGTAATTCCTGTCAAATTTACTTTTTCCAGGCACCCGCTAA ATTAAATTTCCACCGAAATTTCTACTCAATTTGCGACTTTCCCTTTTTCA GCCCATCGTGAAATATTACACCAACATTACGAAAGGAGTTTGTTTCTGCA CTTGTGAATGTGGTAGGTTACTTTATATCACTTTATGGGGGTGAAAATGT ATTATAAAATTGACAAACTATCATCACGAAAGTTAAGATGCCAGAAAGAT GGGTTAAACACAGGTTGAACCAATCATAACACTGAGAAAGAAAATGGTAA AGGTCAGCCAGATATCGTAATGCAGGATGTTAAAACCTGTAAACCCATAA TCAATCAACAGACATATTCACaacttacaaaaaaaaagatcgCATGTAAA TCAACAATTCCAATTTACGATTCCCAATTAAATTTTCTAATCCTTAATTC TCCAATCATAGAAAACGAATGTCATCTAAACAGCACTATAACAAATATAA CAAATAACGAAGACACCAAGGAGGATGATGACNAATGTCATTTAAACAGC ACTATAACAAATAAAGAAGACACCAAAGAGGATGATAAACAAGAAAAAGA AGGCGAGActaccaacaacaacaacaaggatATCAATTACCTACGCatca ttaagaaaatcaaaTGTATGATGTTGACAGTCTACATCACTTTCCTGGTC ACTCTCTCTGTTTTCCCTTCCCTGACCGCTCGCATCGAATCCACGTGGGC TGATCAGAACAAATGGACTggtaattaattatttttttcattttcattgt aaATCTTATtacagttgagctagaatctgagaatgtctgtgtgtgtgtgt gtgtgcgtctgtctgtgtgtgtgtctgtcaccaaaactttggggcaggct ggagacttcaaaaatggtccgattgggttgaaattttgcacccttgatcc ttgggcaaatccctgggggtgtttttttgatttttggagcctggggacga gtttttcgccaaaacgaggctaaaactttggggcaggctggagacttcaa aaatggtccgattgggttgaaattttgcacccttgatccttgggcaaatc cctgggggtgtttttttgatttttggagcctggggacgagtttttcgcca aaacgaggctaaaactttggggcaggctggagacttcaaaaatggtccga ttgggttgaaattttgcacccttgatccttgggcaaatccctgggggtgt ttttttgatttttggagcctggggacgagtttttcgccaaaacgaggcta aaactttggggcaggctggagacttcaaaaatggtccgattgggttgaaa ttttgcacccttgatccttgggcaaatccctgggggtgtttttttgattt ttggagcctggggacgagtttttcgccaaaacgaggctaaaactttgggg caggctggagacttcaaaaatggtccgattgggttgaaattttgcaccct tgatccttgggcaaatccctgggggtgtttttttgatttttggagcctgg ggacgagtttttcgccaaaacgaggctaaaactttggggcaggctggaga cttcaaaaatggtccgattgggttgaaattttgcacccttgatccttggg caaatccctgggggtgtttttttgatttttggagcctggggacgagtttt tcgccaaaacgaggctaaaactttggggcaggctggagacttcaaaaatg gtccgatttggctgaaattttgcacacttgattcttgggcaaatccctgg gggtatttttttcattttttcaaaattttaatttttggggcctggggacg agttttttgccaaaacgaggctaaaacccaaagtgctataatttttctta agccattaagtttacaattgggcctacgaatgatttcaaagatactgaag ttgagccagtgcgtttagcacgttcgacagtttttttcattttcattgta aATCTTATTAAAGGAGGGTACTACGTAACTTCTTTGTTAAGAACTTTTGC TTCCGGGAAACCGTAAAAACCTTATTAAACGGGGTAATTAGATAACTTCC AGTCTAGCCATGCTATACgatcatggcgttctaaagtATGCATCCGAGGA ATGATACTTTTTCTTAATAATTAAAGAATTCCAGTGACTTTCATACGTGG GGTACATGAAAATCTGAGATTGCTAAATCTAGAAATGACATGCTAATATG TCTCAACTTCAAACTTAAAGTTTAAAACTTGTTCTGTACTGTATACGCTT AGATTTTATTCTTTAGAATCGCTCTTCGTGCTGGTTGGATGTTTCTTAAC TTACAATTTATTTGATTATATTGGAAAATCAGCGGtcagtttctttcaaa aggtaaacgaaagtatttttttatttcaatggaAATTAAGATCTTTCAAG CGAGTTGGTGTCATTCATTAGAAGCAGCAGTGTGGTAGCTAAACAAACAA AGTGGCGCAATTTCTTGTGCCTCTTCTttttactctgtaccagagtgtat ctcacgttcatcgcttcgtagtacactctatGCGCATTGtttgtttgatg aaaaaattcccgtacggagacctctacgatgaagtatgatttataaatag caacacttctctcatcgtctcccctctttCACCAACACTCTATTGCAGCG GTCAGTTTGAAaaaccttaaatgaaaaaagacaatgacaacagaccctca acggcaatgaattttgagattagccgtagatactgtgtctgtgtacagac aacttCTTTTTGGAACCCTTAAAAACGCCACCACCAAACGACATTAAGCA atcgaaaatagaaaaaattttcatcatACTAACAAACTAATTGCTCCTCC TTTTTACATCATTTCAGCCTACCAATGAAAGACCTTGGTTGTTAGTCGTC CTGGCCGCACTAAGAGTATTATTCATtccattattcttattttgcaACGT GCAACCACGGATATCAAACATCCCTGTAGCGTTCAGTCACGATTCATTAC CGATCATTTTCATGGCTTTATTCGCGTTCACGGGAGGCTATTTAGGAAGC CTTCCTTTTATTTACGGACCAAGGTTAGTGATGACAATTTTTCTGGCCAT TTCTGTTGCTTCTGACTCCTTGACAGAAAAAGGTTTCACCTCGACTTACT TCATTGAGTAGATCAGtcatttgtttttgaaaagtaCATCCTTATTTTTG CAAACGCGTTTGCCCTTTTCTCTTGAAATCAAGACACAATATGGTTTGAT TCCACTGACCTTTACATACCctagcaaaatctttgatcggagctttttga aaagtggtaccctaatggcgacactactcaatagtggtgtaaatgcatcg agagcgttagatctacttttcctcgaaaACTTACTTCATAACGCCGTTAG ACGTtaccaattcaaaaaagacTTCTATCAAAGATGGTGAATGTAGCTTG GCCCATGGATATATAAAAGTCAGTGGTTGATtccttttatcaaaaaaatg gGCAGATTTCACCCAAACTAAACGAAAATGTTCTCATGTAAAAGAACTGA TTGAATGAGAACTGCTTCTTGTAACTACAATATAGTCTACAGGCTCCTTT ATAGGACAAGTCTAAAATGTGAGCTTACACAACAGAAAGCACCTGATCAC ATCTGCGTTACTTGTAACTTGTTTTACTTCCCGCATCGAATAGTTCGATA CTCAATCGATTGAATCAAGAATACTAATAATCGACCCAAACTTTAACGGT CATCGATTTCCAATCGAAATAAATATCGAATGATAATCGACAAACTATGG AACATTAAtcgatttgttttcttttttgtatcgattaattcgattaatTA AAATTTAGTCATTGATCGATTCCCTTTCGATTTCGATTGTGAAATCTGAT TGATTCGATCATCAAATTTTCAGCTTGTTTATACGACAAATCTTAAAGTT CAAATTCAACCGAAAATCGAACTTACATTcattctgttttctttttcttt cagcaTGGTGGAACCGCACGAACAGGAAATCACCGCCACCCTCATCGTTT TCTCATTGGTGGCCGGATTGACTAGTGGCGCCGCTCTCTCGTTTGCCATT GCTCCAAACGTTTAGCTCTCTGTTACATTTTTATAGCATTTTTCTTATTT ACTTCACTAAAAAGATAGAGATAttatttttgttcatatttcaaaattct gaaTCGTAAATTATACTGGATAAAAGACGTCAGTCAACTTTTAATCTCCG GTCAGATTCTGATTACTCCACGCATGACACTCCGTAAGAGAGTCTGCCCA GGCGGGCCATATTAGATGAGCTTTTGAATGTGATTGGCTGAAGCGAAACA ATCGCACTAAAACAGACGCCAATCTTTAACACAAACATAAACATTAAAAC GTAGTCACTTTCACAAGCAAGATCAACGGGGTTTTGATTGTCTAAAATGA GCAACTGATATAAATCACATTCGCTTTTAGAATAAAACAGTGTGCGCATA ATGGATGATCTATTATGAGATTAGCTATATTTTGACTTTATAGAAACTTT ATGAAAATAATGACATTATGCTTGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064485TCONS_00064485Clytia hemisphaericatranscript
TCONS_00064486TCONS_00064486Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064485-proteinTCONS_00064485-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_418supercontigscaffold_418:102383..112058 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC29A1PREDICTED: equilibrative nucleoside transporter 1 isoform X2 Homo Sapiens
SLC29A2PREDICTED: equilibrative nucleoside transporter 2 isoform X2 Homo Sapiens
SLC29A3equilibrative nucleoside transporter 3 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.15 0.13 0.32 27.74 21.74 7.2 7.4 2.47 4.54 3.16 1.02 0.24 0.42 0.15 0.21 0.08 0.22 0.18 0.19 0.91 0.99 0.12 0.32 2.56 2.2 0.19 0.48 0.43 0.13