XLOC_040234 (gene) - C. hemisphaerica

Overview
NameXLOC_040234
Unique NameXLOC_040234
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_41:344042..352344+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040234 ID=XLOC_040234|Name=XLOC_040234|organism=Clytia hemisphaerica|type=gene|length=8303bp|location=Sequence derived from alignment at scaffold_41:344042..352344+ (Clytia hemisphaerica)
gaaaaatattaatATGATTTTCATTGATATGTTTGTTAGCTATTCTTATT AGAAGGTGTTTGCCAACGGACAAACAGGCAGACAGACAGGTGACAAGACG ATGGGTGTATATAAAGAGGGTGACGCCATCAAAATAGTTTATTGCACCAG TTATATTGGTGAAAAGTGCTTGTTTTGAAGATAGTGGGGCATCGTAAAAC TTATTGAAGGTAAGTCCTTTATCTAGCTGacacacaatgttgttttaaaA GGTTCAACACAACTTCAGCTCCGtttatcccaggctttatttatgtcgct gatggacgccagagaatatcgAGCCTTATCTGGCGCTATCAGTAACCATA AAATGCCATCAAATGCCATATCGATTTTTCCTACAATCGGtgccgaaata tttggcacaaaaggggaattccctcaaaactttaaaaccgcaataatgat ttttaagtgctttgaagtacagttggagagtagagttttaactctgagtt ttaacattcgACTTAAgactcaggatctaaaagctgaaaaattttccaat aaggctgagaatatagcctggaagccacttaatcCCTCCCAAATCGATCA ATCCAACGaagcaaagtggaagtactgaaactgcaatttttgcccgacct ttaaattctgaaaaatgtttaaatatacccaaaattgccaatatatttcg gcgctgattgtagaTCTCAACAAACGTTAGATGGATGTTTTTTGGCGTAT AAAGCCAGCTGAGGAAACTAGACAAGTAGTAATCGGCTGGACAAGAACTG CTTTGCTATGGTGATATCTATCAAAAAAGTACATCGAACACAATCAGTTG AAATTCTAGTGTTTAGATTACAACTTTTTAAAGTTCGatgttaaaaataa ttttcgatatcCGTTAATTAACATTAAATCGGCTAGATTAAATCTGGAAA AAACTACTCCCGGAATTTTTTAGCAAATTCAAAGTTGAAGTATTGATAGT CGCCTCGAATCGATTATGCATAGTTTTATCACATATTTATCATATATTCT TTCTAGATGAAAACAGCAATCATTGTTTTGCTTGGTGTTATTGCTTGCGC CAGTGCAGGTATGTCATAATTATCCCTCTGGTTTTTCGACCGTAGcataa aggtagagcatccagctacggtgcacaaggttgtgggttcgatccccaga aGGGTTATACCatagattcccaaaatggtacttgacgcctctctgcttga tgctcagcaactaaagagacgtatcaagggtaagtggagaaatccaggga aaagGAATGGAGAGCTCcacccctaccttcgggtagctatacgaaaaggg agccttcgggtcgcccttgACTGCGGTTGTAAACTTGCTTACTTTTCGAC TTACATTTTTTATGAAGTTTAACTTGAAGAAATGATAAATGATTTTATAG ACGTAGaacaaaaaaaggaatttttatgGATGACATCTCGCGAAACTGCG TTAGCGACAAGGAagccttttttgtttgtttcgtcgaaaatatcattatt tttcatctGATAAATTTTATGTTACAGCCTTCCGAACATGTGACCGCAAG ATGTTCGCCAAAGTCGGTTGTTACGCTCGTAACAAGGCTTTATTGCCCGA TATGATTTTGAACGGTCGCGAAGTTACCGCTAAATATTTACCTGAAGATG GTTTGATTAGCTGGGAAGACTACAACAGTTACATTCACAGTTTAGCCTGT GAGTGCGCTGAAAAAGCTAAGGAACAAGGCTACAAATATTTCGGTATTGG TTTCTATGGAGAATGCTTTGCCGGCAAAAACGTTGGATTGGCTGGTGTGT TGGCTAAAACACAAATCTCAGATGTAAGTCTCTCTTTCTCAGATTTCTAT ACCTAGTTAGCTCTCCCTAAAACAACCTTCAAGGCAGTagttattttttg aattaaacaaGGATTTGACCTTTGACCTACAGGgcgttggtctaaaaagc agggtagccaattggggtagccgcttggggtagccaattgggctaggttg tggggtagccatgtatttcacagaccagagtaaaaaaataaaaacttttt agatGATGATCCTAATTGGAGCCAGGgggaaactttgaaaaaaatattgc tttttAGACCAATCCCTTAAAGGAAAACCTTCTGTAGGACTTTTAAAGCT CAGATTATAACTGCCGAGCAAGGTCAGTCGCTCATAGGCATCAAGAGAAG TATCTTTTCAGTtattaaaataacaaaatactAACATTACTTACATAGAA ATatattttacataaaaaaaCACACACAAAGACACCAAAAGTGACAACCT GAGGACCGACTTCTGGGATCAGTTGCAAAACCTTTCAGAAAACCGAACAA TAACAACTGGTAACATTTCTTCTACTGTAGCTTTGCATCAGAGGTGACTA CACTGCATGTGAGAAGGTGGAAGATGGTTCACACGAGTGTGTTGGAGGAG CTAATGCTGAATACATTTACACCATCCAAGAACAAGCTGCTCAAGCTGAA CAAAGTAAGACACCCTCTGCACACAGACCCGTTGACACCCTCTGCACACA TagactggaaaaattggccaaaatatcgtacCCCGGtgaaaatattttag tttttgtccccgctgaaaataatcaaataaacaaatagtTGCTCCAAAAG AttgctgttttttttcattgtgaATTTTCTAGCCTGAAGATAATACAATT CAAATTCCCAGGCATAAAAACATGAGGAATATCAACCCCCATTGAGTTCC AGTCTGTTTTTTTCCTTTTGCTAACCAAGATCCTATTAAAATCTGAGAAA CTTGTTCTAGCTCTGTTCATGATGTTCATTATCGGCTTGACACATTACCC GATAAAAACATATAAAACATCGcacttttgatgtttttgaatttgatcTA TTATAAGCTCCAATGATTCAAACATGGCTTTCTCTGTTCACACTTACTAG GAATAAACGGTGGTTATGGCAAATGGGCTGANTCAAACATGGTTTTCTCT GTTCACACTTACTAGGAATAAACGGTGGTTATGGCAAATGGGCTGAATGG ACCCAGTGTGACCAGGAATGTGGTGAAGGAATGCAATTCCGTGAACGTGG TTGCAACAACCCAATCCCCTCAGGTGGTGGTGACGATTGTGAAGCGTTAG GAGATGCTGCTCAATCAAGAAAATGTATGCTCAAAGAATGCCCAGGTAAA actaaattgaccaaaaaacttcTCGCTTATTTAACCGACTGTATTCTGCT TGTaactttaatttgaaaattgagagaaaaacaCTTTATGTTGAAGCATA CTCTACATattaaatgtttttgggcatcatcatattTGCTTCTGATTCTG CTACCCAATCTTGATCAAAGAATTTCCAAAGAtgagttttgatttctttc aaagcaaaGCTCGTTTCAAGAGCAGTAGCTAATCATTACCCTTGAAGTTC ATACATATATACGAGATTGTCTTATCTTTATTAATCTATTTTCCTAGTTG ACGGAGGATATTCCCGATGGAGTGAATACGGAAAATGCAGCGCGTCGTGT GGAGGGGGTGTTATGAAGCGAACACGAACATGTACCAACCCTGAACCGTC CAATGGTGGTCAACAATGTGAAGGCAAAGCTGAAGAAACACAAGCATGTG GAATGGACCCATGCCCAGGTATTCAGATCTTCAGAATAATTTGAAAATCG ACGCTCGTTATGTTGTACTTCNTCCATGCCCAGGTATTTGGACTTATTAT TATCAGAATACTTTGACACTCAGTCAAGTCGTTATCTCAACCTCCCAAGG GTTCAAAAGAGGCTCGAGATTCGAGAGAATAGTTTTGGCTGTGCGGATAT AGTTTGAAGAGTGTGGGCTTTAAGCATATTCTTTCTTTAACCTACACGAA GGTGAGACACACTTATTCTTAAGGATCTAGTGCAATCAAAATTATTTCCC TAAGTGGATGTCATTAATCACCCGGCACACTTCCATATTCCCTTACAAAA ATGATATCACCTACACCAGACCAGAGAAAAATTTAGATATGATAGGTCTG CAAATCAGACTAGTTTTCTCCTTACTGACTTGGATTGCCTTTGAATATAA CTGAAGCTTGACGACAAAAATAACGTTTTCTTTCTTTCACAGTCGACGGT GGTTTCAGCCAATGGTCTAAATATGGTCAATGTACTTTAACTTGTGGCGG AGGATTACGCGTTCGCGAAAGGTCATGCACCAAACCCTCACCAGCACATG GAGGAAAAGATTGTGATGGGTTAACTCAAGAAACTGAGAGCTGCAACTCA CAATCATGCCCAGGTAAGTTCGTTTATAACCATTAAAATTAAATCTTAAA TCTAACTTGGTTTTCTTCATCAAGAAAAGAAGTGGTCCCGAAACATTGCG TGAacgcaaaaatatcataatatcaaaaaagacatagcaaagaaatcgaa aaagtTTCATTACGCAACTGTACTTTAATCTGGAGAATTGTCCCGAAACG TTCTTCCGAAATCAAATAGAACACTATATCGAAAACGATACAAAACTGTA ACGTCTGAGCATGGTCTGAATGTAAGAACTTTCAGCTCAATATAATCCTT CTGATGTCACTTCTTTCTTTCAGTTGACGGAGTATGGTCATCATGGGGTT CATATGGAGCATGCTCAAAAGATTGTGGTTATGGTATTGAAACACGCATG CGCACTTGTACAAATCCTGCACCGCAACACAATGGAAAAGGATGTGAAGG CTCCACTAAAGACACAAGAGCTTGTTACAAAAAAGCATGCCCAGgtaatg aagaaaatttttcttttcccatCGTTCTTGACAATAAGAAAATGTGCAGT CTAGAAATgaataaaatcttcaaaactcaaatacttttaaccctttaagt gccaatgacAAGGGCTATGTAGGAGAGCGAAGCcgtcctgtaatgcccag tttgagtttgaattgaattgaattgaattgggcttcatggtcaagcaaaa aaaaaatcgaaagtgagtcttttcagcgagattttaagctaaaaaatcaa aaaatgcaaaaatttgacaagaacctccaaatttggccctgctttacttg attctgtcttcCAGTGAagtagtttgaagttttacaactgggcacctttc tatcattcaggcaggtccgcgcATCGGGCTTGACTGCTTTAATTTCCCTT ACCTTACCCCCCTTAGCCGCCGCCTAccccgcccttcctaaatcggtcGG TGCCAAaggcgcctaaaagaaagaggagactgcaatctatccaacgagct atgaacaagcttctaactccttctagataagataagcctttaaagtttga actagcgattttctttaaaaaacttagaaaaaaatgactgtgGCACTTAA AGGTTAACTGAAGGAGTACCGAAAAATCCCATTTCATTGGCATTCGATTC GTTGGCATCCCCATTCAATTTTCTCCTCTGCATTTTTGTTGGATGGTCTT AATCCACCTTCCCATATCAAATCAGAGCATAAGGCGGGCGTAAAATCGTC CTTTAATGGACGATTTAGATGAGCAAAGTCCGCAACTAGTAACATTGCAT CTTTTCTCATAGTTAATGGTAAATGGTCAGCCTGGTCTTCATACACCAGT TGCTCAAAGTCATGTAAAGGTGGTCAAAAGTCACGCACACGATCTTGTAC CAACCCAGCACCAGCACACAACGGAAGATCGTGTTCTGGATCGACCAAAG AAACAGTTGATTGTAACCAAAAAGTTAGATGCCCTTGTAAGTGACTCCTT TATTATTGTCTCATATGGACCGGTGTTCATCAAATCATTGGACACTCTAT ACAAGTTTCTGATCATGAATTTGATAATATTCTGAGATCTCTCAGGTCCT AAGGGCAAAAACAGATTAATCGTTTTGTTACGCTTTTCTGCCTTCCGTAA TGAAATTTCTTGCCAAAGTAAAAAGACATAATGGGAGACAAGAGCCAAAC TTAATGACAACCCGCCCTGACAAACATCAAAAAATCTAAGACTCCCTaca taaaataccaaaatatcACTTAACTTGTAACTCCTATACGTCTATGTACT TCAGATTTTCAATACTTAAGCCCTTGCTTTCGACTCCAAGAAATCGAAGT CCCCCAGATAagtttgggcttttttccgcgcaaagcattgtgggtaattc tcgggggtcaaatctgagttttcacgttttagagccgatatcgtctattc ccTTTGAAGAAAGGTTACATATCAAAATGGGTGTTTTACAGAGAAACCTC GCAATAAATTAAACTTTAGGGTTACCTGATGGGTCCTGGTCCTGGGAAAA TTCGAAatgtttaataaaaaaatagaacaCCAAGACTATCAGTATCAGTA GGGAATAGCTCATTTGGAAATTCAAAAcatatctttgaaaaaacataCGA CCACTCATCTAGGTGCAATGAATACAGACTTACGTAATGTGAAAATAACT CAAATAGTGGATTATTTATTGATATGTTTTGTTCAGTTACCCAGGGTATT AAATCCTTAATTGATCAtgtaaatgaaatttgaaactaaaagaaagcttt caaaaaattctcaaattatTTTACTTTATAAAGATCAATGTTTGacagtt tgtttattttggacctGTTGCCTGCGAGGCAAGGAGGTACCTCACTCCAG GCTCTTTTATGCCTTCCCAAAAGGAAGAATCTgaataatttaataatttt aaagCTCAGTAACTCACGTGAGCTTTTGGGTTACTTAAAAAATacctttt tgtattttaataggGTCCCCTACCCTGATATCAACCACAAACCGTACTAC AAGTAGATAAATATATATAATAAACCTCTGTCTCAGGGACCTGCTGAGAA CATTTTAGTCGGTGGGAATAAAATACATCACCAATATAGATGGGAAATCT CGTACTTGATCAGATGATCAGAGTTTCgcaaattttgcttttttccccTT TTGATAATGGTGACAGAAGCTAGTGTCCTGTCACCGTCATAATTCTAGAC AATTGCCCTAAGATAATTGCCCCCGGACAATTACCCCAGGAGAAATGCCC CAGACACCTGCCCCAAATCCCTAAGTCGAAGCACCATAGACATATAAAcg gtttttttttacaaaggtAATTTTAAAAGACGACGAGGctcaattttatt caaaatttaactgaaaaattaaaaacacagGGGCCGCAGCTTTACTTTGA AAGTGGTAGGGCCATGTTTTAGTGTCTGAGACAGGagtaattttggaaaa ttagcccttctagactgcctaaaacaggtctttttcaagatttttaccca gaatttagctgaatcaataaattttctttttactttagcCCAGTTGCCCC CCCCCTCCCGCTGCCGCCGCAGCCCCTCTGTGCTAGTATGAGAGTTTTGA AAAAGCAAAGAGAAATCCGATTTCAAGTcccttttaagaatatttatgcC TAAATCAGGAaacaataagaaaataaatctaCATGCTGATTGCACCACTc aataaatttcatcattttatttAGACTACACTGCGTACCATATAAACCAT GTCTGTGAAGGTGGAAACATGAGAATGTGGTGTACAGATAAACATCAAGT TATCAAGCTATCTGAATACTGGTATGGTAGAACAAACACCAACACGTGTA AAAAGGGTATTAACTGGTTCTGGCATTGGAAAACCGCGTGTAAAGGGGGC TCAAATAAAGTTCACGCCTCATGCCAAAATAAGAATTCGTGCACTGTCTA CGCAAACAACAGCTGGATGGGCGGAGATCCATGTAAAGGCACACCAAAAT ATTACTACGTTAAATTCAGATGTTATGGATAAGTTGTAGTATCGTAACAA AGGAACTTTTAACATCAACGTGCCATATTTCTACGTTTTacgaacatttt tttttttttttttcaatcatatttgaagaaatataatttttgcttcaaag aaaaaatacaacttCAAAGAAATGACCCAGTGAGGTTATCCAAGGCAAAT TGACGAATTTTTCCACGACACAGGACAGTGTTTGAAGGTATTTAATAGAC Cttagagtttttaatttttctaaaaaagtgatgcatcgtgggattgtttc gagtgtattacaatagaattcccttgaggaattcgtaagagatttctatt gtaatacactcgaaacaatcccacaatgcatcgtttCTTTTAATATAAAA AAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064167TCONS_00064167Clytia hemisphaericatranscript
TCONS_00064168TCONS_00064168Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064167-proteinTCONS_00064167-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_41supercontigscaffold_41:344042..352344 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.09 0.14 0.1 0.05 0.02 0.22 0.21 0.1 0.53 0.02 0.12 141.68 149.38 0.19 0.31 12.49 17.85 547.39 776.58 37.27 53.09 43.26 71.3 72.15 78.61 0.47 0.08 0.06 0.08