XLOC_039868 (gene) - C. hemisphaerica

Overview
NameXLOC_039868
Unique NameXLOC_039868
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_396:11095..14416+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039868 ID=XLOC_039868|Name=XLOC_039868|organism=Clytia hemisphaerica|type=gene|length=3322bp|location=Sequence derived from alignment at scaffold_396:11095..14416+ (Clytia hemisphaerica)
ACAACTATTTGATTGATGAAATCAATACAACTGGGAAGGGGGCAAATGCA
ACCATCAGTTACTTACATCACTTTTTCGAGTATTATGGAATGGGTGAGAC
GGACTCATATCTACATGCTGATAACTGCTCAGGTAATGCTGGACTACAAA
AATGTTAGAATTTGCTGACAACCAGGTGACCTAGCCAAAATTTAAATGct
atctttttaaagaaaactttcCCATTCAAAAAAACTGttgtcttaatttt
ttttattgtaaactACAGGCTTGATATATGCTAAAGTTTTTCTCAGATTT
GAGCCTGGATATGCTTATGAAAAATGTTGACTGACTCTATTTTTGTGTGT
ACTAATCAAGGAATTTCGCACAAATCAAATTTTGCaagttaacttttttt
tttttttcactgggTTAATGGCAAATCCATTGTGTCGCTGGGTGAGATTT
TGGATCGGTCCAATACTCGGTTCCATGAAAATAActgaaatgaaatttca
gtccgCCCTCAAAAATGCATGTAAACAATTTGGAaaaatatcaaccagtc
ccTGAACTGAGATTTAcacttgaaaaaaattgcaaaaattaatccagtTT
AAGTAAATATATTCTTTTCACTTTCAGGACAGAATAAGAACAATGCTTTT
ATTTGGTATTTGATGTGGAGGATNGataaacaaaaattgcaaaaattaat
ccagtTTAAGTAAATATATTATTTTCACTTTCAGGACAGAATAAGAACAA
TGCTTTTATTTGGTATTTGATGTGGAGGATTTTGAATGGTTTCCATGAAA
AGATTGAGTACAGTTTCATGATAGCCGGCCACACGAAATTCAGCTGTGAC
AGgtaataaaagaattttgttGGGTAAGTTTGTTGTTTCAAGCAAGGTAA
ACAGACTTAAAAATTAATTCCACTTTTTAAGTTGGTTTATTACCTGTCAC
AGCTTTTAATTCAGACTTAAGTCTTGTTCAGCAtaattttagacaaaatt
tttaaaacacaattcattaaaaattacaaaaatagttGTCGAATAAAACT
GAACTTTAAAAAATGGTGGTTGTCGTCACCTATGACCAACCCTTCTCAAA
ACTTACCaacccagaaaatttttttactctGAAAATTAAATAGAAATTTT
GNCAAttcattaaaaattacaaaaatagttGTCGAATAAAACTGAACTTT
AAAAAATGGTGGTTGTCGTCACCTATGACCAACCCTTCTCAAAACTTACC
aacccagaaaatttttttactctgaaaattaaatagaaattttgaaaaat
catcaaaacaaaatatttcttttcgaCCGACCGGTCAATCTAGGGTCAGG
TGATGACAAACCAATATATATTTTCAAGCGCAGCCtaaaatgtatatttt
ttgTATCTTCCTTAACGTGCTTCGGCAGCTTCAAAAAGAAACTACGATCA
ACTCGAGTATCATCTCTGATGTTTGCGACTAATCAAAATGTAATTTCGCT
GTACTTGTTGGTAACCACAACAAAGATAtcaccacagatctgtaaagccc
gaaggataTCACTGTTCAAACGTATGACTGTTCACATTACTTTGAAAAGG
AGTTACGGTTCCAGACCATCAAAGATTTTCTTAAATATCACCATTTCAGG
ATGTCGAAGGATCAGCCTGGAATTGTTAAGTGTTATAAATCACTAGATAA
TGAACCAGTCGAGTTCTCCATTTTCATTCAGCGAAATCCACCAAAAGTGA
CTGCTGCATTACCGAAGATCGTCCCACCGAAAGGATTCACNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCAGCAAACCCACTATCCATATAACC
CACTCCAACCTGGgccgatttttttcaaaacccccAGAAAGTGTGGGATT
TTTGGGATTTGTAATAAACCTTCAGTACAACTATTTGATTGATGAAATCA
ATACAACTGGGAAGGGGGCAAATGCAACCATCAGTTATTTACATCACTTT
TTCGAGTATTATGGAATGGGTGAGACGGACTCATATCTACATGCTGATAA
CTGCTCAGGTAATACTGGACTACAAAAATGTTAGAATTTGCTGACAACCA
GGTGACCTAGCCAAAATTTAAATGctatctttttaaagaaaacttttcca
ttcaaaaaaactgttctcttaattttttttattgtaaactACAGGCTTGA
TATATGCTAAAGTTTTTCTCAGATTTGAGCCTGGATATGCTTATGAAAAA
TGTTGACTGGCTCTATTTTTGTGTGGACTAATCAAGGAATTTTGCACAAA
TCAAATTTTGCaagttaactttttattttttttcactggGTTAATGCCAA
ATCCATTGTGTCGCTGGGTGAGATTTTGGATCGGTCCAATACTCGGTTCC
ATGAAAATAActgaaatgaaatttcagtccgCCCCCAAAAATGCATGTAA
ACAATTTGGAAAAATATCAACCCGCCCCTGAACTGAGATTTACActtgaa
taaacaaaaattgcaaaaattaatccagtTTAAGTAAATATATTCTTTTC
ACTTTCAGGACAGAATAAGCACAATGCTTTTATTTGGTATTTGATGTGGA
GGATTTTGAATGGTTTCCATGAAAAGATTGAGTACAGTTTCATGATAGCC
GGCCACATGAAATTCAGCTGTGACAGGTAATAAATGAATTTTGTTGGGTA
AGTTTGTTGTTTCAAGCAAGGTAAAAACAGACTTAAAAATTAATACCACT
TTAAAAGTTGGTTTATTACCTGTCACAGCTTTTAATTCAGACTTAAGTCT
TGTTCAGCAtaattttagacaaaatttttaaaacataattcattaaaaat
tacaaaaatagttGTCGAATAAGACTGAACTTTAAAAAATGGTGGTTGTC
GTCACCTATGACCAACCCTTCTCGAAACTTACCaacccagaaaatttttt
tactctgaaaattaaatagaaattttgaaaaatcttcaaaacaaaatatt
tcttttcgaCCGTCCGGCCAATCTAGGGTCAGGTGATGACAAACCAATAT
ATATTTTCAAGCGCAGCCTAAAATGTATATTTTTGTATCTTTCTTAAGGT
GCTTCGGCAGCTTCAAAAAGAAACTACGATCAACTCGAGTATCATCTCCG
TACGAGATCGCTGATGTTTACGACCAATCAAAATGTAATTTCGCTGTACT
TGTTGGTAACCACAACAAAGATATCACTGTTCAAACGTATGACTGGTCAC
ATTACTTTGAAAAGGAGTTACGGTTCCAGACCATCAAAGATATTCTTAAA
TATCACCATTTCAGGATGTCGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063608TCONS_00063608Clytia hemisphaericatranscript
TCONS_00063609TCONS_00063609Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063608-proteinTCONS_00063608-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_396supercontigscaffold_396:11095..14416 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.49	0	0	0	0.38	0.52	1.04	1.87	1.28	0	2.7	1.3	1.49	1.3	1.68	1.35	0.25	0.8	0	0.35	1.27	1.91	0.56	1.48	0.24	0.17	1.71	0	0.77	0.59