XLOC_039705 (gene) - C. hemisphaerica

Overview
NameXLOC_039705
Unique NameXLOC_039705
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_386:193741..201111-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039705 ID=XLOC_039705|Name=XLOC_039705|organism=Clytia hemisphaerica|type=gene|length=7371bp|location=Sequence derived from alignment at scaffold_386:193741..201111- (Clytia hemisphaerica)
CAATTTTGTGGAGCAGGCATGTTTACAACTAGATTAAATTTAGCATGATT ACTCTGGAATTAAATTTAGAAGAATGCAGCCGATTTTGCGAAAGTATGAC GTATCTGTGAATTTTGATTGGCTCTTGAATAAATTACCCAGAATCCTTTT CCAGACCTTTCATTTTTAGCGAGGAACAGCATTTTTCTTTCACACACACG GCAGGTCAAACTGGTGAAGACTGACAAGTCAACTTTTACTAACTCTTCAG AGTCTTCATTATAAACGTCACTTTGTTCACTCACAACCGTTTAAAGTCAA AAACACTGTAAAAATGTATGACTCTTTACCATCATCATTTGGTAAAAGAT ATGACAGAGATGATAGAAGAGGTGGTGGTGGAAGAGGGTAAGAGTTTTGT TCTTTGCGTTTTCTTGTTTCGCTCTTGTAATTTATGCCATTCTGCTTATG TTCACAGAAATCATAGAACCTAAATTTACTTGAACCTCTAGTATTAAGCT ATTTCTTTTGTGGTAGTTTTTGGATTTTACTGTAGAAATAAACAATGTCC TAAGTAGCAAAATAATTATATAAGCGAAATGTGTTGAGACAGAAAATTTA TATTTCAAATGGAAATGACATCTTTTCATTGCAACTTTTATATGAAATCA TCTAATACAATAGCATCGAGTGGGTTAGTACTTTTGGTTGAATTGGGTCC TAAATTGTCCCATATTGGGCCATTCCAGAATTTGTCTGTAACAGGGGGCG GACGACACAGGATTTCCGAGGGCAAAAGCTTTCATCAAAATTCAAAATTT CCAGGGCGAGAGAAGAAAATGTATAAATTTCCAAGACATTTGAATTTAAA AAGGCAAAAATAAGCAGAATTTCCAATGCATTTTGCAAAAGTACATGGAT TTTTATTGGAATTTCTGAACACCACTGGAAAAGAAAAATTATTTCTGAGG CTAGAAAAAATCATTGGTTGAAATAAACTTTTTTTGATAAGACCAGTAAA ATTTTGCTGAGGCTGGTCTGTTCTTATTCATTTATTTGATTTATTTATAG GGTGTAAATAAGATATTTTAGGCATTATACCCAATTTTTACTTGGATTTT GACAAAACCCAAAAGATCGAGTTTCAAGGGGGAGGGGTCTCCTGCCTAAG GTAGGGGGTCTTCATAAAATTATTATTTCTGTTTTACTTTCTTAAAGCAA TCTTTAACAGTCAAGAACAAGTACAAGTAAGGATACCTTCGGCAATTCTC TCCTAACTAGGAGAGTTGTATCCTAATTTGGGGATTTAGGTATCCTAGAT AGGAGAGCAGACAAGCAGACTCTTTGACCTGAATTTTTGAGGTTGCTGCT TCGATCCGCGTTTGGAAAACTATGCAAACCTTTTCTTCATCGAGATTTTC ACCACTGACCAAATTTTAAAGTATTTTCTCTGGTGGGTTCCTCAAAAATT AACATCCTTAATAATCTGCTGTTAATAAGAGCCTAAAATTTTGCTAACAC AAGTTAAAGATTTGTTTTTCTTTTTACGGAACGCCCCTCTACGGTCCGAA TTTCAAAATGGTAGCCGTAAAGAAGGAAGGGACCTGGGTGATTTTCGCGC AAAAAAAAGCGTTCGAATATGCTAGTTAGCACATTTGAGTGGTTTTGGGC TATCGTTTAGAATTCCGCCAGCCAAACTCAATGAAATTCGGTACACAATC TCATTTGCTTATTATTTACATCTTGGAAGTGGTAAGATGGCGCGGATGTC TCTGGATGGTGAAAAATACAGGTTTTTTGGTTTTTAGTATCCAAATTAGG ATGTTGATTGCTATATTGGATACTTTTTTGTAACCAATTTAAGATTCTCT CCTAAGTAGGAGAGAGGTAGGAGAGAGATTGCCAAAGGTATCCTAACTTG CACTTTTTCTTGACCGTTAAGGGGGCAGACTGAAATATCTATAGAATTTC CTAAGGGAAGTTTTAAGTTTTCAAATGCATTTCCTAGGGTCGTGACCCCT ATAGAAACAAGAATAAGCTACTTCTGACTGACATTATATGTAAAATATCA AAACCTGAGTAAAAGGTGCTCCGATATATTTACACTTAAAAAATGAGTTA TTGATAATAAACTTACGTAGGAGCAAGTCTAGCCAAGTTTGATAAATGAC GTGTCATGTGGAATTGGAGGCTAAAAATTATTAATTTGGAAGATGAATCA ACATAGGAAAATTATGATATGGTTTTTTATGTCTATTTTACTAATTCAAA GTAAGTTTTTATTGGTACTGTAATAGCAACTGTCAAAATTTCATACAGGC TCTTTTCTGAAATATTTTAAGAATATGGCTAATGTCACGCTAATGTCACT TTTTCTTTATTTCAGTGGATATGGTGGTGGATACGGTGGTGGCAGAGGAG GCGGTAGAGGTGGCGGTGGTGGAGGAAAATTCAAGGATAATCAAGCAGGG GCCAGTTTGAGAAAACCAAGATGGAATATGGACAGTCTCCCCAGATTTGA TAAAAACTTCTATAGAGAGCACCCAAATGTCCAAGCCCGCAGTATGGTGA GTCAGGATTTTGGTTGAGTTTTTAGGTTGAGCAGCCTAGTCTTCTCTGGT GCATAAAAACCAGTAAACCCATTACCAGCCATTATAAACATTACTTTTCT CCAATCAGCTCATTGATCTATTTGAAATTGTATTTTCTTAAGCTCCAGGT CCAAATTATACACATGTTATTTTGTTTCGTTCTTTCGTTAATCCCCTGCC GTTAATTGTAAAATAGACTCCTTATCCTTTGATGGTTCTACTTTTAGGAA GCTGTAGAAGAATACCGTAAAGCAAGAGATATTACTGTCGCTGGACGTAA TTGCCCTAAACCATGTCAATCATTTGAGGAAACCAATCTACCAGGTAAAA TAAGCTAGTGATTGGTCATTATTCAGACCATCAACAATCATTCAAACACC CTAAGACTTCATGTTTGATTTGTTCTCTACTCTCAGGTACCTAATAAGCA GAGATTTTTCAAAAATAGGGTAGGGTGTCTTGTTTCTTTGAAAATTATGC TTGCAGGGAAAATCTGGGAAATCAAAAAGGCTTAAAACATCAAGCACCCA AGGATATTGATCATTTATTTTCAGATTATGTTGCAGAAACAATAAAGCGA ATGAATTTCAACGAGCCTACGCCAATCCAAGCACAAGGGTTTTCTGTTGC TCTATCAGGTAGAGATAGTGTTGGTATTGCTCAAACTGGTAGTGGGAAAA CCATTTCGGTAAGCGTTTATAAATCTTTTTTCTTTGATAGTTGATTTTCA TTATTGTTAAATTTAATGTCATCATACAGTGGTAGCAACTCAATTTGTAA TTTATTTTGCCGAAACAGTGGGGAATGCCAAGTTATTTATTGACACCATC CTCTTAAGCTATCATTTTTGACTGAAAGAAATGTGGTGAAATAAAGAACC TTTCTTTCATTTTAACTTTGTTTTTTTGTTAATAGTTCATGTTGCCTGCA TGTGTGCATATTCATCACCAAGAACCACTCAGAAGTGGAGATGGCCCAAT TTGTCTTGTCCTTTGTCCAACCAGAGAACTTGCTATTCAATGTCAAACAG TTGCCGGTGAATTTGGTAAATCCAGTCGTATCAGAAGTACATGCATTTAT GGTGGTGCATCAAAAGGACCACAAATTCGAGATCTAGAGAGAGGATCTGA GATTGTTGTTGCTACACCAGGACGTCTTATCGATTTACTTGAGATGAGAA AGCTTACCTTGGGTCGTGTCACTTACATGGTTTTAGATGAGGCAGACAGG ATGTTAGATATGGGTTTTGAACCACAAATTCGTAAAATCTTTGACCAAAT TCGTCCAGACAGACAAGTTCTTATGTGGTCTGCTACATGGCCAAAAGAAG TTCGAAAACTTGCAGAGGACTTTTTGAAAGATTATGTTCAAATCAACATT GGTAATATAAACATCCATGCAAATCACAATATCTTGCAGATTGTCGATGT TTGTCAAGAATATGAAAAAGAAAATAAACTTGTCAAACTGCTTGAGGAAA TAATGGGAGAAAAAGAAAACAAGACCATTATTTTTTGTGAAACCAAACGT AAAACAGATGATATTACTCGACGCCTTCGCAGAGATGGGTAAGTCACTGT TTCTCACTTAACATTTGCACATTTTGCTTTTCTGTCAGGATTCTTAATTC TCATTTTAATACTTTTACGTTCCAGCTTAGATTGCAGTGTTTATAGGGAA CTTCCCCTTTTTATGAAATATTTTTTAAATTATTGGGGCTAAAGATTGAA TTTCAAACAATTTTCTTTTAGTTGGCCTGCTATGTGTATCCATGGAGACA AATCCCAACCTGAAAGAGAATGGGTCCTAAAAGGTAAATTGCAAAAAATA AGAACTAAGCCTAAGATAACAAATTTAGTTATTTTAAATCAAAAAATTTG AAAAATCCCTAGGAAAATAAAGAAATGTGTCCAAAATAGGGCAAAACTGC CAAAATTTATTCCCGTGAAATATAATTTTTTGGAATTTTTTTACAACTAC AAAAATTAGTTTAAATAATTAAAATCTGAAATTACTTCCCTAGCATGCAT GCATGAACTTTTCCTATAGAATATCAAAGATTTACGAATTATCAAGCTGA CCTCAACAGGATGATAATAATGTCTTCTTACATCTTAGAATTCAGAAGTG GAAAGTCACCAATTCTTCTTGCTACTGATGTTGCTTCTCGTGGATTAGGT AATAAGAGGAATTCATGGCATTTGCAACACTGTTTTGACTTAAGTTGCAA TTTAGTTTACATTACCAATCTCTATGTTATAACTTCTTTACTTTTAAACT ATGTAGTTGTTTGTGTTGTATGGAATGTTTTATTTTTAATAGTGATTTTT TTGGATTTTATTTTTTTTTATTTTTAATAGTGATTTTAAATGCAGGTCTT TTCTTTCTTTATTAGGTGCTGTTGGTGCCACTTAACGACGACACATGACA TTGAATTACCCACATACTTAAAATAATTGGAACATATAAGGAGTTCTCAA GAGTTTTCACGCACAATTAAATTTGTAAAACAGCTGGTTCTCTCAGTCAA GATCTAGGCTCTAGCTTAAAAAAACTCAGGTAGGCACATGTATCAAAGGC AGTTTCCAGTCATAAAAAAACTGTCAATCGAATCTTGCCTAGATTTCTTG GCATATTTCTAAAAATGTACAGAATCAGCTGGTGCGTGACAACAAAGAGC TCCTGTAATGAAAACAATGTTTCCAAACGTCTGGTTATGGTGAAATTTCA ATGTTATGTTGCAATTCGTGTGTGTGGCACCGATTGATAAACTCGCTTGG ATATTATGGTTTTCTACCTAATTTATTCAAGCTAACTTTAACCTTTCAGT ACTAAATTTTTTGTTATATCCTGCTGTTTATATATATTCAGTTACACACC TCACAATTCCACACTCTAAACCTATCAGTTTTCATTTCAGCGATATAAAA TTATTATACATAGTAGACTGACAAGAATTATCCTGAATTTTTCAGATATT CCAGACATCAATTTTGTTGTCAATGTGGATTACCCTAACAACGGAGAAGA CTATATCCATCGTATTGGACGTACAGCTCGTGCTAATCGAACTGGTACTG CTTACACCTTCTTCACACAAAACAATGGTAAAAATGCTGCAGAGCTTGTA TCAGTCATGCAAGAAGCAAACCAAGTAGTCCCACCCAAGCTTCAGGATCT AGCTAAAGGGCATTATGGTGGACGAAAGAGAGGTATGTCTATGGAAGGCC TCGNTAATCGAACTGGTACTGCTTACACTTTCTTCACCCAAAACAATGGT AAAAATGCTGCAGAGCTTGTATCAGTCATGCAAGAAGCAAACCAAGTAGT CCCACCCAAGCTTCAGGATCTAGCTAAAGGACATTATGGTGGACGAAAGA GAGGTATGTCCATGGAAGGCCTCATTAAGAATTGAAGTCGATACAATTTC AAACTGGGATTTTGAAGATTTCTTGTTCTATTCAAACGCATGTTATAATC TGCTTTGTATTTCCGATTTGAGAAGCCATCGTATAATTCTCATCTGTCAG TTAAAGCTTTTATTGTCTTAGCATTTCGTCAAAACTTAGTCTTGAAACGA TAGAAAACTCTTCTTTTCTTTCAGTGAGATACAGTTCTGAAAGTGACGAT CATGGTGGCAAACGTTTCGCTGGAGGATCTCGAAGCGGAGGAGGTTCACG AAGTGGTGGCTACAGCGGTGGTGGTGGTGGCTCCCGCAGTGGAGGATACG GAGGTGGTGGCTCCTCCAGAGGATATGGTGGAAGCAGTGGAGGAAGCTCC AGAGGCGGAAGCAGCCGTGGTGGGAGCTACGGTGGCGGAAGTAGTTATCA AAATGGAGGTGGAAGTAGCGGCGGTGGCCAAAATTGGAATAACGGAGGTA AGTTTCTAAACTTAAAATTTAAAACAACGCCAAATAAACTAAGTGAACAC ACAAAAGCAAGTGATATTTTTACAGAGAAATAGAGCCTTGTGTTATCTAA GATGATAAGCGCAGATGTTTCCCCAACAAGTAATCAAGTGTCCCAAAATA TCAAAAATAACTTTGTTCTTAGGTTTTGCCCAATTTTGAATCTTCATTTT AAAAATGGACCCGATTGAAAGAATTATTCTTTGACGTTCATCAGGTTACA ATCAACAACAACCTTCTCAACCGCCACAGCAATTACAAGGTGGTAGTGGC GGCGGCGGCGGTGGTGCTGGTAACGCCGACCAATGGGCACAATATCACAA ACAAATGGCAGAGTGGCAACAAAAGAACCAACAATGGCAACAGTGGCAGT CAACACAGGGTGGCTCTGGACACTAAAACTTTATACCGATAAGAGACATT TAATTTATTTAGCGTATATGTCGTTAAGGTGGTCATCACGCACTAGCAAA AAATCAAGGTTTTAAATAGAAAAGCCTTGAATATGGTCGAAGTTTACAGA CCTCATTCGATTGTCTATTTTACTACTGAATATCAGCCGATTTTCCTATT GCTATTTATTAATTGAGTAAGCTTGTCTCCTCATCTTTATGCACTTCATA AACTTGTAGTATTAATAAAATCTGAATTATCATTAATTTTGACGATCGTA GCTTAGCATGTTATTATTTTTTAAACAAGAGTAAACGGATTTTATTTTAC TGTATCTTCTTGTCGTGTTGCTATTTTGTGTCTTTAGTTGCAACACGGGT TATTTGTCACGTAAATGTATATAAAAACTGATAACGGTAAAAGATACAAG TGTTTTTATTTGTTTTAAAAGATCATGTATTTATTTTTCTGTTTAGTCCA TTTTATCCTTGTCCCTCGAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063366TCONS_00063366Clytia hemisphaericatranscript
TCONS_00063365TCONS_00063365Clytia hemisphaericatranscript
TCONS_00063364TCONS_00063364Clytia hemisphaericatranscript
TCONS_00063363TCONS_00063363Clytia hemisphaericatranscript
TCONS_00063362TCONS_00063362Clytia hemisphaericatranscript
TCONS_00063361TCONS_00063361Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063366-proteinTCONS_00063366-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_386supercontigscaffold_386:193741..201111 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DDX17probable ATP-dependent RNA helicase DDX17 isoform 3 Homo Sapiens
DDX5PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
238.99 233.01 484.46 564.57 961.82 718.16 345.88 363.39 297.98 362.56 553.63 360.37 662.75 829.23 526.92 554.44 482.17 491.58 421.67 396.76 594.76 605.67 414.15 453.32 558.13 581.08 338.1 523.01 390.35 453.13