TCONS_00063365 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063365
Unique NameTCONS_00063365
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2320

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063365 ID=TCONS_00063365|Name=TCONS_00063365|organism=Clytia hemisphaerica|type=transcript|length=2320bp
CAATTTTGTGGAGCAGGCATGTTTACAACTAGATTAAATTTAGCATGATT
ACTCTGGAATTAAATTTAGAAGAATGCAGCCGATTTTGCGAAAGTATGAC
GTATCTGTGAATTTTGATTGGCTCTTGAATAAATTACCCAGAATCCTTTT
CCAGACCTTTCATTTTTAGCGAGGAACAGCATTTTTCTTTCACACACACG
GCAGGTCAAACTGGTGAAGACTGACAAGTCAACTTTTACTAACTCTTCAG
AGTCTTCATTATAAACGTCACTTTGTTCACTCACAACCGTTTAAAGTCAA
AAACACTGTAAAAATGTATGACTCTTTACCATCATCATTTGGTAAAAGAT
ATGACAGAGATGATAGAAGAGGTGGTGGTGGAAGAGGtgGATATGGTGGT
GGATACGGTGGTGGCAGAGGAGGCGGTAGAGGTGGCGGTGGTGGAGGAAA
ATTCAAGGATAATCAAGCAGGGGCCAGTTTGAGAAAACCAAGATGGAATA
TGGACAGTCTCCCCAGATTTGATAAAAACTTCTATAGAGAGCACCCAAAT
GTCCAAGCCCGCAGTATGGAAGCTGTAGAAGAATACCGTAAAGCAAGAGA
TATTACTGTCGCTGGACGTAATTGCCCTAAACCATGTCAATCATTTGAGG
AAACCAATCTACCAGATTATGTTGCAGAAACAATAAAGCGAATGAATTTC
AACGAGCCTACGCCAATCCAAGCACAAGGGTTTTCTGTTGCTCTATCAGG
TAGAGATAGTGTTGGTATTGCTCAAACTGGTAGTGGGAAAACCATTTCGT
TCATGTTGCCTGCATGTGTGCATATTCATCACCAAGAACCACTCAGAAGT
GGAGATGGCCCAATTTGTCTTGTCCTTTGTCCAACCAGAGAACTTGCTAT
TCAATGTCAAACAGTTGCCGGTGAATTTGGTAAATCCAGTCGTATCAGAA
GTACATGCATTTATGGTGGTGCATCAAAAGGACCACAAATTCGAGATCTA
GAGAGAGGATCTGAGATTGTTGTTGCTACACCAGGACGTCTTATCGATTT
ACTTGAGATGAGAAAGCTTACCTTGGGTCGTGTCACTTACATGGTTTTAG
ATGAGGCAGACAGGATGTTAGATATGGGTTTTGAACCACAAATTCGTAAA
ATCTTTGACCAAATTCGTCCAGACAGACAAGTTCTTATGTGGTCTGCTAC
ATGGCCAAAAGAAGTTCGAAAACTTGCAGAGGACTTTTTGAAAGATTATG
TTCAAATCAACATTGGTAATATAAACATCCATGCAAATCACAATATCTTG
CAGATTGTCGATGTTTGTCAagaatatgaaaaagaaaataaacttgTCAA
ACTGCTTGAGGAAATAATgggagaaaaagaaaacaagacCATTATTTTTT
GTGAAACCAAACGTAAAACAGATGATATTACTCGACGCCTTCGCAGAGAT
GGtTGGCCTGCTATGTGTATCCATGGAGACAAATCCCAACCTGAAAGAGA
ATGGGTCCTAAAAGAATTCAGAAGTGGAAAGTCACCAATTCTTCTTGCTA
CTGATGTTGCTTCTCGTGGATTAGGTGCTGTTGGTGCCACTTAACGACGA
CACATGACATTGAATTACCCACATACTTAAAATAATTGGAACATATAAGG
AGTTCTCAAGAGTTTTCACGCACAATTAAATTTGTAAAACAGCTGGTTCT
CTCAGTCAAGATCTAGGCTCTAGCTTAAAAAAACTCAGATATTCCAGACA
TCAATTTTGTTGTCAATGTGGATTACCCTAACAACGGAGAAGACTATATC
CATCGTATTGGACGTACAGCTCGTGCTAATCGAACTGGTACTGCTTACAC
CTTCTTCACACAAAACAATGGTAAAAATGCTGCAGAGCTTGTATCAGTCA
TGCAAGAAGCAAACCAAGTAGTCCCACCCAAGCTTCAGGATCTAGCTAAA
GGGCATTATGGTGGACGAAAGAGAGTGAGATACAGTTCTGAAAGTGACGA
TCATGGTGGCAAACGTTTCGCTGGAGGATCTCGAAGCGGAGGAGGTTCAC
GAAGTGGTGGCTACAGCGGTGGTGGTGGTGGCTCCCGCAGTGGAGGATAC
GGAGGTGGTGGCTCCTCCAGAGGATATGGTGGAAGCAGTGGAGGAAGCTC
CAGAGGCGGAAGCAGCCGTGGTGGGAGCTACGGTGGCGGAAGTAGTTATC
AAAATGGAGGTGGAAGTAGCGGCGGTGGCCAAAATTGGAATAACGGAGgt
tttgccCAATtttgaatcttcattttaaaaatggaCCCGATTGAAAGAAT
TATTCTTTGACGTTCATCAG
Run BLAST on NCBI

transcript from alignment at scaffold_386:194418..201111-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063365 ID=TCONS_00063365|Name=TCONS_00063365|organism=Clytia hemisphaerica|type=transcript|length=6694bp|location=Sequence derived from alignment at scaffold_386:194418..201111- (Clytia hemisphaerica)
CAATTTTGTGGAGCAGGCATGTTTACAACTAGATTAAATTTAGCATGATT ACTCTGGAATTAAATTTAGAAGAATGCAGCCGATTTTGCGAAAGTATGAC GTATCTGTGAATTTTGATTGGCTCTTGAATAAATTACCCAGAATCCTTTT CCAGACCTTTCATTTTTAGCGAGGAACAGCATTTTTCTTTCACACACACG GCAGGTCAAACTGGTGAAGACTGACAAGTCAACTTTTACTAACTCTTCAG AGTCTTCATTATAAACGTCACTTTGTTCACTCACAACCGTTTAAAGTCAA AAACACTGTAAAAATGTATGACTCTTTACCATCATCATTTGGTAAAAGAT ATGACAGAGATGATAGAAGAGGTGGTGGTGGAAGAGGGTAAGAGTTTTGT TCTTTGCGTTTTCTTGTTTCGCTCTTGTAATTTATGCCATTCTGCTTATG TTCACAGAAATCATAGAACCTAAATTTACTTGAACCTCTAGTATTAAGCT ATTTCTTTTGTGGTAGTTTTTGGATTTTACTGTAGAAATAAACAATGTCC TAAGTAGCAAAATAATTATATAAGCGAAATGTGTTGAGACAGAAAATTTA TATTTCAAATGGAAATGACATCTTTTCATTGCAACTTTTATATGAAATCA TCTAATACAATAGCATCGAGTGGGTTAGTACTTTTGGTTGAATTGGGTCC TAAATTGTCCCATATTGGGCCATTCCAGAATTTGTCTGTAACAGGGGGCG GACGACACAGGATTTCCGAGGGCAAAAGCTTTCATCAAAATTCAAAATTT CCAGGGCGAGAGAAGAAAATGTATAAATTTCCAAGACATTTGAATTTAAA AAGGCAAAAATAAGCAGAATTTCCAATGCATTTTGCAAAAGTACATGGAT TTTTATTGGAATTTCTGAACACCACTGGAAAAGAAAAATTATTTCTGAGG CTAGAAAAAATCATTGGTTGAAATAAACTTTTTTTGATAAGACCAGTAAA ATTTTGCTGAGGCTGGTCTGTTCTTATTCATTTATTTGATTTATTTATAG GGTGTAAATAAGATATTTTAGGCATTATACCCAATTTTTACTTGGATTTT GACAAAACCCAAAAGATCGAGTTTCAAGGGGGAGGGGTCTCCTGCCTAAG GTAGGGGGTCTTCATAAAATTATTATTTCTGTTTTACTTTCTTAAAGCAA TCTTTAACAGTCAAGAACAAGTACAAGTAAGGATACCTTCGGCAATTCTC TCCTAACTAGGAGAGTTGTATCCTAATTTGGGGATTTAGGTATCCTAGAT AGGAGAGCAGACAAGCAGACTCTTTGACCTGAATTTTTGAGGTTGCTGCT TCGATCCGCGTTTGGAAAACTATGCAAACCTTTTCTTCATCGAGATTTTC ACCACTGACCAAATTTTAAAGTATTTTCTCTGGTGGGTTCCTCAAAAATT AACATCCTTAATAATCTGCTGTTAATAAGAGCCTAAAATTTTGCTAACAC AAGTTAAAGATTTGTTTTTCTTTTTACGGAACGCCCCTCTACGGTCCGAA TTTCAAAATGGTAGCCGTAAAGAAGGAAGGGACCTGGGTGATTTTCGCGC AAAAAAAAGCGTTCGAATATGCTAGTTAGCACATTTGAGTGGTTTTGGGC TATCGTTTAGAATTCCGCCAGCCAAACTCAATGAAATTCGGTACACAATC TCATTTGCTTATTATTTACATCTTGGAAGTGGTAAGATGGCGCGGATGTC TCTGGATGGTGAAAAATACAGGTTTTTTGGTTTTTAGTATCCAAATTAGG ATGTTGATTGCTATATTGGATACTTTTTTGTAACCAATTTAAGATTCTCT CCTAAGTAGGAGAGAGGTAGGAGAGAGATTGCCAAAGGTATCCTAACTTG CACTTTTTCTTGACCGTTAAGGGGGCAGACTGAAATATCTATAGAATTTC CTAAGGGAAGTTTTAAGTTTTCAAATGCATTTCCTAGGGTCGTGACCCCT ATAGAAACAAGAATAAGCTACTTCTGACTGACATTATATGTAAAATATCA AAACCTGAGTAAAAGGTGCTCCGATATATTTACACTTAAAAAATGAGTTA TTGATAATAAACTTACGTAGGAGCAAGTCTAGCCAAGTTTGATAAATGAC GTGTCATGTGGAATTGGAGGCTAAAAATTATTAATTTGGAAGATGAATCA ACATAGGAAAATTATGATATGGTTTTTTATGTCTATTTTACTAATTCAAA GTAAGTTTTTATTGGTACTGTAATAGCAACTGTCAAAATTTCATACAGGC TCTTTTCTGAAATATTTTAAGAATATGGCTAATGTCACGCTAATGTCACT TTTTCTTTATTTCAGTGGATATGGTGGTGGATACGGTGGTGGCAGAGGAG GCGGTAGAGGTGGCGGTGGTGGAGGAAAATTCAAGGATAATCAAGCAGGG GCCAGTTTGAGAAAACCAAGATGGAATATGGACAGTCTCCCCAGATTTGA TAAAAACTTCTATAGAGAGCACCCAAATGTCCAAGCCCGCAGTATGGTGA GTCAGGATTTTGGTTGAGTTTTTAGGTTGAGCAGCCTAGTCTTCTCTGGT GCATAAAAACCAGTAAACCCATTACCAGCCATTATAAACATTACTTTTCT CCAATCAGCTCATTGATCTATTTGAAATTGTATTTTCTTAAGCTCCAGGT CCAAATTATACACATGTTATTTTGTTTCGTTCTTTCGTTAATCCCCTGCC GTTAATTGTAAAATAGACTCCTTATCCTTTGATGGTTCTACTTTTAGGAA GCTGTAGAAGAATACCGTAAAGCAAGAGATATTACTGTCGCTGGACGTAA TTGCCCTAAACCATGTCAATCATTTGAGGAAACCAATCTACCAGGTAAAA TAAGCTAGTGATTGGTCATTATTCAGACCATCAACAATCATTCAAACACC CTAAGACTTCATGTTTGATTTGTTCTCTACTCTCAGGTACCTAATAAGCA GAGATTTTTCAAAAATAGGGTAGGGTGTCTTGTTTCTTTGAAAATTATGC TTGCAGGGAAAATCTGGGAAATCAAAAAGGCTTAAAACATCAAGCACCCA AGGATATTGATCATTTATTTTCAGATTATGTTGCAGAAACAATAAAGCGA ATGAATTTCAACGAGCCTACGCCAATCCAAGCACAAGGGTTTTCTGTTGC TCTATCAGGTAGAGATAGTGTTGGTATTGCTCAAACTGGTAGTGGGAAAA CCATTTCGGTAAGCGTTTATAAATCTTTTTTCTTTGATAGTTGATTTTCA TTATTGTTAAATTTAATGTCATCATACAGTGGTAGCAACTCAATTTGTAA TTTATTTTGCCGAAACAGTGGGGAATGCCAAGTTATTTATTGACACCATC CTCTTAAGCTATCATTTTTGACTGAAAGAAATGTGGTGAAATAAAGAACC TTTCTTTCATTTTAACTTTGTTTTTTTGTTAATAGTTCATGTTGCCTGCA TGTGTGCATATTCATCACCAAGAACCACTCAGAAGTGGAGATGGCCCAAT TTGTCTTGTCCTTTGTCCAACCAGAGAACTTGCTATTCAATGTCAAACAG TTGCCGGTGAATTTGGTAAATCCAGTCGTATCAGAAGTACATGCATTTAT GGTGGTGCATCAAAAGGACCACAAATTCGAGATCTAGAGAGAGGATCTGA GATTGTTGTTGCTACACCAGGACGTCTTATCGATTTACTTGAGATGAGAA AGCTTACCTTGGGTCGTGTCACTTACATGGTTTTAGATGAGGCAGACAGG ATGTTAGATATGGGTTTTGAACCACAAATTCGTAAAATCTTTGACCAAAT TCGTCCAGACAGACAAGTTCTTATGTGGTCTGCTACATGGCCAAAAGAAG TTCGAAAACTTGCAGAGGACTTTTTGAAAGATTATGTTCAAATCAACATT GGTAATATAAACATCCATGCAAATCACAATATCTTGCAGATTGTCGATGT TTGTCAAGAATATGAAAAAGAAAATAAACTTGTCAAACTGCTTGAGGAAA TAATGGGAGAAAAAGAAAACAAGACCATTATTTTTTGTGAAACCAAACGT AAAACAGATGATATTACTCGACGCCTTCGCAGAGATGGGTAAGTCACTGT TTCTCACTTAACATTTGCACATTTTGCTTTTCTGTCAGGATTCTTAATTC TCATTTTAATACTTTTACGTTCCAGCTTAGATTGCAGTGTTTATAGGGAA CTTCCCCTTTTTATGAAATATTTTTTAAATTATTGGGGCTAAAGATTGAA TTTCAAACAATTTTCTTTTAGTTGGCCTGCTATGTGTATCCATGGAGACA AATCCCAACCTGAAAGAGAATGGGTCCTAAAAGGTAAATTGCAAAAAATA AGAACTAAGCCTAAGATAACAAATTTAGTTATTTTAAATCAAAAAATTTG AAAAATCCCTAGGAAAATAAAGAAATGTGTCCAAAATAGGGCAAAACTGC CAAAATTTATTCCCGTGAAATATAATTTTTTGGAATTTTTTTACAACTAC AAAAATTAGTTTAAATAATTAAAATCTGAAATTACTTCCCTAGCATGCAT GCATGAACTTTTCCTATAGAATATCAAAGATTTACGAATTATCAAGCTGA CCTCAACAGGATGATAATAATGTCTTCTTACATCTTAGAATTCAGAAGTG GAAAGTCACCAATTCTTCTTGCTACTGATGTTGCTTCTCGTGGATTAGGT AATAAGAGGAATTCATGGCATTTGCAACACTGTTTTGACTTAAGTTGCAA TTTAGTTTACATTACCAATCTCTATGTTATAACTTCTTTACTTTTAAACT ATGTAGTTGTTTGTGTTGTATGGAATGTTTTATTTTTAATAGTGATTTTT TTGGATTTTATTTTTTTTTATTTTTAATAGTGATTTTAAATGCAGGTCTT TTCTTTCTTTATTAGGTGCTGTTGGTGCCACTTAACGACGACACATGACA TTGAATTACCCACATACTTAAAATAATTGGAACATATAAGGAGTTCTCAA GAGTTTTCACGCACAATTAAATTTGTAAAACAGCTGGTTCTCTCAGTCAA GATCTAGGCTCTAGCTTAAAAAAACTCAGGTAGGCACATGTATCAAAGGC AGTTTCCAGTCATAAAAAAACTGTCAATCGAATCTTGCCTAGATTTCTTG GCATATTTCTAAAAATGTACAGAATCAGCTGGTGCGTGACAACAAAGAGC TCCTGTAATGAAAACAATGTTTCCAAACGTCTGGTTATGGTGAAATTTCA ATGTTATGTTGCAATTCGTGTGTGTGGCACCGATTGATAAACTCGCTTGG ATATTATGGTTTTCTACCTAATTTATTCAAGCTAACTTTAACCTTTCAGT ACTAAATTTTTTGTTATATCCTGCTGTTTATATATATTCAGTTACACACC TCACAATTCCACACTCTAAACCTATCAGTTTTCATTTCAGCGATATAAAA TTATTATACATAGTAGACTGACAAGAATTATCCTGAATTTTTCAGATATT CCAGACATCAATTTTGTTGTCAATGTGGATTACCCTAACAACGGAGAAGA CTATATCCATCGTATTGGACGTACAGCTCGTGCTAATCGAACTGGTACTG CTTACACCTTCTTCACACAAAACAATGGTAAAAATGCTGCAGAGCTTGTA TCAGTCATGCAAGAAGCAAACCAAGTAGTCCCACCCAAGCTTCAGGATCT AGCTAAAGGGCATTATGGTGGACGAAAGAGAGGTATGTCTATGGAAGGCC TCGNTAATCGAACTGGTACTGCTTACACTTTCTTCACCCAAAACAATGGT AAAAATGCTGCAGAGCTTGTATCAGTCATGCAAGAAGCAAACCAAGTAGT CCCACCCAAGCTTCAGGATCTAGCTAAAGGACATTATGGTGGACGAAAGA GAGGTATGTCCATGGAAGGCCTCATTAAGAATTGAAGTCGATACAATTTC AAACTGGGATTTTGAAGATTTCTTGTTCTATTCAAACGCATGTTATAATC TGCTTTGTATTTCCGATTTGAGAAGCCATCGTATAATTCTCATCTGTCAG TTAAAGCTTTTATTGTCTTAGCATTTCGTCAAAACTTAGTCTTGAAACGA TAGAAAACTCTTCTTTTCTTTCAGTGAGATACAGTTCTGAAAGTGACGAT CATGGTGGCAAACGTTTCGCTGGAGGATCTCGAAGCGGAGGAGGTTCACG AAGTGGTGGCTACAGCGGTGGTGGTGGTGGCTCCCGCAGTGGAGGATACG GAGGTGGTGGCTCCTCCAGAGGATATGGTGGAAGCAGTGGAGGAAGCTCC AGAGGCGGAAGCAGCCGTGGTGGGAGCTACGGTGGCGGAAGTAGTTATCA AAATGGAGGTGGAAGTAGCGGCGGTGGCCAAAATTGGAATAACGGAGGTA AGTTTCTAAACTTAAAATTTAAAACAACGCCAAATAAACTAAGTGAACAC ACAAAAGCAAGTGATATTTTTACAGAGAAATAGAGCCTTGTGTTATCTAA GATGATAAGCGCAGATGTTTCCCCAACAAGTAATCAAGTGTCCCAAAATA TCAAAAATAACTTTGTTCTTAGGTTTTGCCCAATTTTGAATCTTCATTTT AAAAATGGACCCGATTGAAAGAATTATTCTTTGACGTTCATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039705XLOC_039705Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063365-exon-scaffold_386-1575043694:200725..201111TCONS_00063365-exon-scaffold_386-1575043694:200725..201111Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1575043694:198566..198746TCONS_00063365-exon-scaffold_386-1575043694:198566..198746Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1575043694:198218..198314TCONS_00063365-exon-scaffold_386-1575043694:198218..198314Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1575043694:197854..197987TCONS_00063365-exon-scaffold_386-1575043694:197854..197987Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1575043694:196974..197626TCONS_00063365-exon-scaffold_386-1575043694:196974..197626Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1575043694:196729..196790TCONS_00063365-exon-scaffold_386-1575043694:196729..196790Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1575043694:196364..196423TCONS_00063365-exon-scaffold_386-1575043694:196364..196423Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1575043694:195983..196146TCONS_00063365-exon-scaffold_386-1575043694:195983..196146Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1575043694:195330..195566TCONS_00063365-exon-scaffold_386-1575043694:195330..195566Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1575043694:194665..194937TCONS_00063365-exon-scaffold_386-1575043694:194665..194937Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1575043694:194418..194489TCONS_00063365-exon-scaffold_386-1575043694:194418..194489Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1510915933:200725..201111TCONS_00063365-exon-scaffold_386-1510915933:200725..201111Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1510915933:198566..198746TCONS_00063365-exon-scaffold_386-1510915933:198566..198746Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1510915933:198218..198314TCONS_00063365-exon-scaffold_386-1510915933:198218..198314Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1510915933:197854..197987TCONS_00063365-exon-scaffold_386-1510915933:197854..197987Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1510915933:196974..197626TCONS_00063365-exon-scaffold_386-1510915933:196974..197626Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1510915933:196729..196790TCONS_00063365-exon-scaffold_386-1510915933:196729..196790Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1510915933:196364..196423TCONS_00063365-exon-scaffold_386-1510915933:196364..196423Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1510915933:195983..196146TCONS_00063365-exon-scaffold_386-1510915933:195983..196146Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1510915933:195330..195566TCONS_00063365-exon-scaffold_386-1510915933:195330..195566Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1510915933:194665..194937TCONS_00063365-exon-scaffold_386-1510915933:194665..194937Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1510915933:194418..194489TCONS_00063365-exon-scaffold_386-1510915933:194418..194489Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1491911889:200725..201111TCONS_00063365-exon-scaffold_386-1491911889:200725..201111Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1491911889:198566..198746TCONS_00063365-exon-scaffold_386-1491911889:198566..198746Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1491911889:198218..198314TCONS_00063365-exon-scaffold_386-1491911889:198218..198314Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1491911889:197854..197987TCONS_00063365-exon-scaffold_386-1491911889:197854..197987Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1491911889:196974..197626TCONS_00063365-exon-scaffold_386-1491911889:196974..197626Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1491911889:196729..196790TCONS_00063365-exon-scaffold_386-1491911889:196729..196790Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1491911889:196364..196423TCONS_00063365-exon-scaffold_386-1491911889:196364..196423Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1491911889:195983..196146TCONS_00063365-exon-scaffold_386-1491911889:195983..196146Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1491911889:195330..195566TCONS_00063365-exon-scaffold_386-1491911889:195330..195566Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1491911889:194665..194937TCONS_00063365-exon-scaffold_386-1491911889:194665..194937Clytia hemisphaericaexon
TCONS_00063365-exon-scaffold_386-1491911889:194418..194489TCONS_00063365-exon-scaffold_386-1491911889:194418..194489Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_386supercontigscaffold_386:194418..201111 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.0246 14.5962 15.7349 15.2757 67.4256 50.0372 33.9633 54.5173 37.0331 37.0802 73.0853 42.0937 80.653 97.0816 54.5492 78.9534 45.1206 64.7388 51.1496 66.4083 55.636 54.6135 36.5955 52.6237 32.7787 49.4978 26.3437 24.6643 45.7749 65.841
Blast
BLAST of TCONS_00063365 vs. Swiss-Prot (Human)
Match: DDX5 (Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens GN=DDX5 PE=1 SV=1)

HSP 1 Score: 504.597 bits (1298), Expect = 9.370e-169
Identity = 255/368 (69.29%), Postives = 302/368 (82.07%), Query Frame = 2
Query:  470 GASLRKPRWNMDSLPRFDKNFYREHPNVQARSMEAVEEYRKARDITVAGRNCPKPCQSFEETNLPDYVAETIKRMNFNEPTPIQAQGFSVALSGRDSVGIAQTGSGKTISFMLPACVHIHHQEPLRSGDGPICLVLCPTRELAIQCQTVAGEFGKSSRIRSTCIYGGASKGPQIRDLERGSEIVVATPGRLIDLLEMRKLTLGRVTYMVLDEADRMLDMGFEPQIRKIFDQIRPDRQVLMWSATWPKEVRKLAEDFLKDYVQXXXXXXXXXXXXXXLQIVDVCQXXXXXXXXXXXXXXIMGEKENKTIIFCETKRKTDDITRRLRRDGWPAMCIHGDKSQPEREWVLKEFRSGKSPILLATDVASRGL 1573
            G  L K +WN+D LP+F+KNFY+EHP++  R+ + VE YR++++ITV G NCPKP  +F E N P  V + I R NF EPT IQAQG+ VALSG D VG+AQTGSGKT+S++LPA VHI+HQ  L  GDGPICLVL PTRELA Q Q VA E+ ++ R++STCIYGGA KGPQIRDLERG EI +ATPGRLID LE  K  L R TY+VLDEADRMLDMGFEPQIRKI DQIRPDRQ LMWSATWPKEVR+LAEDFLKDY+ INIG + + ANHNILQIVDVC + EK+ KL++L+EEIM EKENKTI+F ETKR+ D++TR++RRDGWPAM IHGDKSQ ER+WVL EF+ GK+PIL+ATDVASRGL
Sbjct:   38 GEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405          

HSP 2 Score: 101.679 bits (252), Expect = 3.729e-22
Identity = 45/77 (58.44%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 1720 LA*KNSDIPDINFVVNVDYPNNGEDYIHRIGRTARANRTGTAYTFFTQNNGKNAAELVSVMQEANQVVPPKLQDLAK 1950
            +A +  D+ D+ FV+N DYPN+ EDYIHRIGRTAR+ +TGTAYTFFT NN K  ++L+SV++EANQ + PKL  L +
Sbjct:  400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVE 476          
The following BLAST results are available for this feature:
BLAST of TCONS_00063365 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DDX59.370e-16969.29Probable ATP-dependent RNA helicase DDX5 OS=Homo s... [more]
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