XLOC_039500 (gene) - C. hemisphaerica

Overview
NameXLOC_039500
Unique NameXLOC_039500
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_379:98873..106185+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039500 ID=XLOC_039500|Name=XLOC_039500|organism=Clytia hemisphaerica|type=gene|length=7313bp|location=Sequence derived from alignment at scaffold_379:98873..106185+ (Clytia hemisphaerica)
CAAATACAGTGCACCAATGAATctactcttttagagcaaaatttacaatt
tttcctggaattgctgaaatttccaccctacagtaaatttattaaaaaaa
gtcacCCTTAGTGCATTTTTGCTATCTTTAAAAACGTACCCTTAACTGCC
GCACAAACCCCTTGGTCAATTCATCAGAATGCCCCTGGGTAATATTTACA
AACTTTAAAGCCCTTTAACTTGCTTTCTTTTGCACTTGTAGTTTATGGTA
AAATTCTTTGATATTATCATATTTTCTTTCGTTGCATATcgggcattttt
cagttttgtgattatatgaatttttttgttgatCTACACAATTCTAGGAA
ATTCTGGgaaatttgcaattttagctGAAATTCTCAACCCAACTTGTCAT
GGCCTACGGTAGATTTGATGATGATGGTATCAATTGTTCTTTGTGTGCTT
GTAGTTGCCTCATCTTACCAATGTTATTGACAATATCAGCAACCTTGGTG
GTCTTTGTTGGTGGTATCAATAACCTTTACACAATGGATATCCGCATTGC
TATTGGAATCATGCTTGCTGTATTTAATGTCTTAACCTTTTTGTTATTTG
CTTGTGATAAAGCCAGTGCTATGTCAGATGGTCTTCGTGCAGCAGAGCTT
GTGCTTTTGTATATGGCGTGGTTTGGAAGTCCAGTGGGTGCCTTAATGGG
GATTTGTTGCTGTAACCATAAGACCGCTAAAGGTGGCTTCATACTTGCAT
TTATTTGCGTATTTTTGTTCAACATGTTGTGGGTATTCCTTTACTTTATA
TTGACTGCTGAGAATTCGTTGGCAGATGCATTCAATAATAAAGTCAATAA
TTCCACtatttgataaacaaatttgaaaggtAAAATAATGTTGGTTGGTT
ACTAAATGAAGggtgaaaataaaaccttaatAACCTAAATCCCATTGATA
TGTGCACCTTTTATTTTCATGGACTTCCTAAAAATGCGCATATTTAAACA
CCATTTATTTTCCACAGCTTAGTGTCAAAATTATATTGGATATTTGGATC
CAAATCTTGtagaaatcaaatttttagttttgttaaatatttttgaatta
ttttttgttgagtttaTGGAACTTTCTTTTCTGTTCATTacatttgaatt
ttcttaaCTGTCAGTTTGGTTATAGTCACAAATCTTGAACATATTGTATC
GtaaacaaattttgagaaactgtATCAAATTCTAGGTTGATGGAGAGACA
GAAAACAATCTAGGCTTTATTTTTCACTTCATTGATAATAATCATTTTCA
TTGTATAgattaaaaacgaaaaaacaataacaaagaaACTAATGGATTAA
TACAAGTATAAGTTATCTTCAATATGAGGCTGTCAAGTTTTCTACGTCGA
CTATCACATAATGTCTTGGTCATTGTTGTATTGGCTAACTTGATTTTGTA
TCATGTCAACGGTAGTGAAAACTTGCAATATGATAGCCATGAAGACTTGA
TAAAGAAAGTCAAAGAATCTGGAACCTTACCACCGTATAAAAATGTTAGT
gttatttcaaaactttatgaagtGTGACTCTATGACCAAAAGtttaattt
attgatttttaaattaAACTTAAGTGCTATTTTGTTCTTTATACTTTTAG
GGTGACAAGACAACGCCAGATATCAAATCACCGGAACAAGCTGGAACTGT
TGATTATGGTTTTATACATGCCTTTGTTGCATCCATATCTGTCATTATTG
TTTCGGAGCTTGGTGACAAGACATTTTTCATTGCGGCCATTATGGCTATG
AGACACTCTAGATTAACTGTATTTGCTGGTGCTATTGCAGCATTGGGTCT
TATGACAGTGTTATCAGTTTTTCTTGGTTATGCTACCACAGTCATCCCAA
GGAAATACACGTTTTATATTTCAACAGCACTATTTGCAATTTTCGGCTTA
AAGATGTTGAAAGAGGGTTATGACATGGATCCTGATGAAGGAGCTGAAGA
ACTGGAAGAAGTCCAAGCtgaattaaaaaagaaagaggCAGAGGTTTACT
ATTTACTCGATTTTGCTCTGTTTCCGTCACCTTCGAAATTAATGTTataa
aatttcagaaataattGCTAATATGTTAGAAAGCAATCTTAATAACGAGT
TTTAAACCATAAAATTTAATTCTAAATTTGAGGTTGATTCAAAAGACCCT
AACCATTACAAAAGGCTACTGCGGGGTGTTATAATACCTTGCATAATACT
AACTTCTTAGATACTGTTGCCTACCCCTATTTAGAAATTATATATTTCTC
CCTAATCCTGTcccttaaaaataaatttaacaaCAGTACGCGGTTTTACG
GGTTTTTCGATAAAAAGTTGGCAATCATTGAATAGAACTGACAACCAGAT
ATTTCATTGCACTTTCCTTTTCAGTTGGAAGGTGAGACGACGACAGATGT
AGAGACGGGTATCATCAGATCCACCATCCGTAGGAACCGTTGTATGCGAG
CCATCATGAGATGTTGTTCACCCATTCTCTTACAATCATTCACAATGACT
TTCTTAGCTGAATGGGGCGATCGTTCACAATTAACAACCATCATTCTTGG
TTCTAGAGAGGTAAAGAATCTTTACAACCCGAATTCACAGACTTTCCAAA
AAATTCTCCAAAACTTCATGAAAATGCGTGAGATGCAAAAGAAAACTTCA
CAAAGatgtgaattttgggtccgctgaGGTCCGCAAAGCCGCAAATAAAT
TGTTTTTCGCTTGATTTCTGTCTTTGTAGAANGAAAGATGTGAATTTTGG
GTCCCCTGAGGGCCGCAAAGCCGCAAATAAATTGATTTTCGCTTGATTTC
TGTCTTTGTAGAATCCGATTGGGGTAACGATAGGAGGGACCATTGGTCAT
GCGTTGTGTACTGGGTTGGCTGTAATGGGTGGTCGAATGATTGCTCAAAA
GATCTCTGTTAGAACTGGTATGTATATCTTTTATACTCTCCTTTTTTCTC
TCCTTACGTTTTATTGTAAAACTTGTTGCCTTTCAATCTCACGGACTGCC
AAAAATACCAAATAACTTAATTTATAAGTACTAAAATGGCATAGCACAAA
TACAGAAGCTACAAAGAGCATAAATGTCAGATCTTTAGAATTAACTTCAA
ATGTTACCTTAAATATATAATTTGTTAAGTGTTGATTATGTTAAATGTTA
ACCCTTTCTGTGACAATGACACTCGAAGTATTTGCCTAAATTGGTTACCA
AccttttgaacaaaaaactaGAGTgtccatttttaaaaagaaaagtaaag
acaAAGGAGAAAGGAAAACAATGTTCAGATTGACCTCATGAATCCTCATG
AAAGGAGAAAGCCAAAAtagtttgattattttcaaaagtgaGTGACGTTT
TCACAGAGAGGGTTAGCGCccatttaaacatttttaaattataatttttc
atcATTCTCCTTTTtctgacacttttctttttatttagtCACGTTAATCG
GTGGAGCATTGTTTTTGTCATTTGCTTTCTCTGCCCTCTTCATAAACGAG
CGTGGAGAATGGTCTCGATTAATAACAGCTTGTGGCAAACATTAAACTTG
TTTAATTCTTTAACAAGGTACCTCTATAAAGATATAAAATACTCTGCGAC
GTGAATTTAAACcttaaattttaaacatttaaaaacttaATAAAGTTAAA
TACTCCGTAAGTTGACCGTCAATACGTAACAGTTTGTagatttttgagat
ttatttAGGCAGGTTGGTGTAATTTGGAATATACATCGCTGAGAATGAAT
AAACCTAATACTAAAATAAGTTACTACCGAATAAGTTATTTATTTTGTAC
AAAAGGGTAAAAACAATACAATTAGTGTAAATGTTTTAGGGATTTGCCCA
AAATACATAGTGTCTCTAATGGTTAAGAGGAGTGGANACGTGTAAATGTT
TTAGGGATTTGCACAAAAACATAGTGTCTCTACTGGTAAAGAGGAGAGGA
GTGGATTTTGAAGCAAAGGGCAAGAAGTGACGAGAAAAGAAACTTTTCTA
GAGGGGCACAAATTTAGGGTGACTCGAAGGACTTGTCGAACCTTCTAGGG
GAGGGAGACAGTTTTATCTAAGTACATACCATACATAAGCTTTTTTTTCT
TGTCACACttggtatttttcaaaaacaatctAATTTTTGGCGCCAAAAAT
TTAAGCCCAGATGTTAGTGTGAGGGATTTGGACTCAGGAAGGCTAGGAAA
ACACTAAGTAAGGGAAAGTTTTCATCTTAGGTATTAGGGCAGACTCAGGA
AGGCTAGGAAAACACTAAGTAAGGGAAAGTTTTCATCTTAGGTATTAGGG
CAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCACTAAGTAAGGGAAAGTTTTCATCT
TAGGTATTAGGGCAGACTCAGGAAGGCTAGGAAAACACTAAGTAAGAGAA
AGTTTTCATCTTAGGTATTAGGGCAGACTCTGAAGAACATTATAAAAAGC
TCGCTTAATTGGGCATCGATGTTTTTCCATGTTACAAGATGTTTATTATT
GagatatttttttctcatttcagtGACTCTGGTTGGTGGTGTTGTATTCC
TGATATTTGCTGCGTCAGCACTTTGGATGGGTGAGATTGAGTAGTGTTAG
TAGTTATTATatttagaaagttttttattatcCAAACCTTATCTTTTata
caaatttttaaaagaaacacAACATCAGCATGCCTTTCTTCCGAATAGAT
TTGAGATGCAGAGTTGAACAAACTCACGAGGATCTAATTCCTTACAAATG
ATATTTTCGATtgacttttcataaatttttttgagtgcaacgactgcctc
gtattgaaaccattaccaatgGAATTATACCCCTTGAGAGTTCAAGTATA
AATTCTTATGAACTTCTCTTGGAATCAAtcaccatagcaatattttgaaa
ccGAGGTTAGTGTTTCTCGTGACGTAAGGTCTATCGTTAGACACTTTTAT
ATAGGTCTCAAAGTTTTGAAATCGATTGTGTTTCTAGGTatacaacctcg
ttccctgcgtactacctatcagcttttttatgcctACTGATAGccctaga
taataccctggtgtcaataagtaacgtaaataaagcctgggatacacggg
aacGAGGTTGCTAGGTCTACTCCTttctatattatttttttggaaccACA
GACTCCGGTGCTTGTTATGTATATGAATTTTCATTATTTGGCATTGTTTG
TATTTGTATTCTAAgataatttatgatttttaaacatttagtaaaatcaa
aattaccGATGTAATAATATAGTCCACACTTTCTTGGTCTATAAAATTGA
GGGTCAGTATTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063068TCONS_00063068Clytia hemisphaericatranscript
TCONS_00063069TCONS_00063069Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063069-proteinTCONS_00063069-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_379supercontigscaffold_379:98873..106185 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMEM165transmembrane protein 165 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
52.13	54.25	14.51	12.03	50.15	39.77	81.18	84.57	65.9	68.32	44	43.47	31.8	25.21	47.96	49.52	57.73	51.85	26.38	48.92	32.22	30.67	68.94	70.6	36.7	44.26	54.25	41.55	94.93	78.11