XLOC_039354 (gene) - C. hemisphaerica

Overview
NameXLOC_039354
Unique NameXLOC_039354
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_372:113321..121571-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039354 ID=XLOC_039354|Name=XLOC_039354|organism=Clytia hemisphaerica|type=gene|length=8251bp|location=Sequence derived from alignment at scaffold_372:113321..121571- (Clytia hemisphaerica)
ACGAAACTTTTTAAAAGAAATGACAAATTTTTTCACTCTCTCTTTAGATC ACAAATAATGAAAATACAAAATTTACAAAATGTGAAAGATATGTGATGGC AACATCCATGGCAAAGAAATAAAGGATGGATAGACAAACGGCAAAATATG GTGCTCTGTAAGAATTATCCCTTCGAAAACCAATCCAACCAAAACCAAAA GAAGTCCCTTTTTTAACTCAGGTTTCCAGGCCTCAAATAGATGTAAAAAT TTAGAAATGTTCTTTGAAGAGTTTTAAAATTGGCATTATTGTTTCATGCA TCCACTATTTCACTTTCATTTACAGAATTTGGGATGGAAATATATATCAT GAAATTGAAGATCAGTCAGGACAAAATTACACTTTTCATGGTCAGTAAAA TACTCTCTTGTTTTATAAGAACCAGTAAATTTTTGTTGAGGCTCAGTTGC TTTAGTATTTTTGGCACTTTGAGCCTCAAATTGTTTATATCCTGTTCTTA TTTAGGCTAGGATTGACATATTTTAAGCAACAAACCAGAATTTTTCGGCT TAAGCACCGAAATTGCATGAAATTTAAGAATTATAGGGTCAGCATAGTTC TTAGTCTATTTGACAATTTTGAGCCTCATTGTTGACAATGACAAAAATGG AAAATTCAATTGACGGATTCAAAGGACTTATCATTTCAAGGAATCGGGAA AACAAATTTGTTCGAGTCAAGGAAATTTCGATTTATGCAGTAAGGATTAC AAGGAATTTTTAACTGAGAGGACCAGAAAGTTTGTTTGAGTGTTTTCTTG AATAACGTTTTTTTAGAAGTGGACGACTTGATAATTGAAGACAATTTCAA GAAATTTGAAGAACTTCTGGAACACAATCCACATTTGATCAATTCGTTGC GAACAAAAAGAAATAAAACTACTTTATTAATGGAGTCCGCATGGTCCAGA ACATGGGCTGAAACTTTTCCAAAACTGGCTGGTAGGTTATTTGACACCAA GATGCAGAAATTTTTATCCGACACGCCATAAAGCTCTGAAGATCGGGAAA ATTTTTAACATCTAGAATATTTAAATTACGGAATTTTGCCAGACCGCGTC AAGGAATCCGCAGCGAGAGGCATGAACCCCAGCCCTCGTTTTCGGCGCGA TTGGTGGGTCCAACCGAAATTTTTTCAAGTTTACGCGCAAGGGTAGTTAC ACCAAACTGGGGATGCGACACATCAAAGGTTGAATATGATTCCTCTCCGA TGGATATATTGGCCCGCTCCTTTAGAGCTTTATCTTGGTCAATCAACTAT CTGTGTGATGGAATTTTGATGTACTGATATCACATCCTTTTATTTGAACC ACAATGTTTTATTACTTTCATTTTTGAAATTGTCCGTTGTTAAATGGGTT ACTGGGTTAGTTATGCTGAAGACCTGTACTTCGGGAAGTTGTTTTATAGC CGTCCAAGTACTTTTCTACAAGATCTTGGTAAGACCCAACAGGAATTGAA CTCTTATTGTCACCGTAGCCAAATACTTCCTTTACACTGTTGCTCTCTCT TACCATGAATAGTATTTCCCACGGCCTTTTTTTTTAAATACGGTTGACAC TGTGTTATTCGACGTTCTACTATTCGATACGCTTCAATAATATTAAAAGT CAACGTCAACAAGAAACTCTCATAAACGACATTCTACTATTCGAAGCGCT CCCTTATTCGACAAAAAGTCTTTTCCCCTGGAAAATCGAATTAGAGAGCA TCAACTATACGACATTTTTAGACAATCAGTCGCACACAGGACCTATGATT TTCTGCACCGTAACCAAATGTTCTAACTTTCGCTCTAACTTTGAATCACA GCTGTTAATATTCTTCTTTACCAGAATATAATCAAGATATATCAGTTGTT GGTATCTATGATCGAAATATAATCCATCGCATTGTAATACATGGTGCAGA TGATGAAGCTCTTACGATGTTAACAACATTATCAAAACACCAAAACATCA AAGATCCATCCATCATTAATGCTGTCGACTCAGTACGCCAAGACACGCCC CTGCACATGGCGGCATATTTCAATAAACTAAAAACTTTAGAGTATTTGGT TGATTTTGATGCAGATTTGACTTTACGTAACAATAAAGGTGAAAAACCTG GTGAACATTTTAAATGCAGCGAGGACACAAAAAAATTGATAAAATCTCTT GGGAAATGACACAGCAGGACTTGAACACAGCGAACGATAAACTTGAGAAG TATCTCAGAATCATTACGAGCCCTGTTTTCGTGTTAACTGTACTTTTACG CATCCAATTTAACTTTTTAATACTTTTTAACTTTTTTAGTTTTAAGGCTA AAAACGTTCTTAAAATGTTCTTATCATCATCATTTGGGAGTATTTTTGTG CAATTTCTGAAGAAATTTGGTGTTTTTAGAGTCCTGTAGAAATGGCAAAG TCTTGTTCTTCATATTTTCTTTATCAATGCCTTTTATCTAAGAGCTTTCG AAACGGTCCTATTTAGCACATACCGTTGTTCCGCCTGAGATTCCACTGTC TCTTTCCTGCAGAACAAGACAAGGTCAGGAGCCGGAGCCCGAATTGTAAA ACGAGTCTCTAAAAAGTCAATGCCTTTTATCTAAGAGCTTTCGAAACGGT CCTAATTTAGCACATACCGTTGTTCCGCCTGAGATTCCACTGTCTCTTTC CTGCAGAACAAGACAAGGTCAGGAGCCGGAGCCCGATTTGGAAAACGAGT CTCTAAAAAGTGGCCAGTCAAAACATAATACAATATATTTCCCGTACCTT TGAGATCAACCCTCTTATATTGTTTTTCGAGAACAATATGTCCCAAAGCG ATTCTGTTAGAATCATTATCTTTTGCGCATAAACAACATTTTTTACGCAT AAATTATGTCATTGATGCAACGTTGATGCTCCATTTCAAACGTCTTCAAC TAGCAAATGGTATTGAATTGCAGAAAATGTCCCACGTGATTCAAAATGAA AATTGAAAATTTTTACCATTTTGATAAGTAACAGTAATATCAATTATTAC GGTACCGAATGAGAGAAAATTTAAAAGTCATGGCTCAAAAAAACATTCCC TCGTATAAAAAAAGATTCCTCCAAAGTTAAAGATTCGAAAAAAAAAGATT CCCCAAAAAATTAAAGATTCCCTCAAAGTTAAAGATTCGAACAATACACG CTTTTTTTTATAAGAATGGTGTAAATCCATTTCATTATGGATATTCTTAA CTTTTTTTGGGAAAATCATCCTAAAATATTCTTACATCAAATTCTTAGGT TAGGATCCTAATTTATACTAGATTTAGTACATACGTCTCAAGCATAAAAT GGCACTTTTGTAAAAGGAGTGAGCCTAACTTGGGGATAATTGATGATTTA TAATTGAAAATGGCATTCTTAGCAAAATTCCATGATGGTGATATTCTTAG CATATTCTTAGTTTTTTGGCCATTTTTATCATGGACATTCTTATAAAGTG TATTCTTATAAAAAAAGCGTGTAATAAAGATTCCCTCAAAAAAAATAAAG TTCCCCTCAAAAAAGAAAGAATCCCCAAATAAAAGAAAGTAAGATTTTTG CCCTTCTCGGCCACCGTAGATATTCATACTTGAATATAACACTTTAGTTT TCGAGGTTGTTCGTATTCTCTTCTTAACTACAAAGGGCTTCAAAAAGGCT AGAGAATATATTGTTAACAATGATANTTCGAGGTTGTTCGTTTTCTCTTC TTAACTACAAAGGGCTTCAAAAAGGCTAGAGAATATATTGTTAGCTTACC TCCAAATTTTAATGTTTAGCTATTTCTCTTTATTTTCTTTTTTTGCATAA TTTAGTGCGATACTTTTTTAATTAATTTTTTTCAATCTAGGGTTGCTTGA TTACGTGGAAATCAAGTAAGTCTTTGAAAAATATTAAAAACTCAATTTTG AAGAAATTGGCGCCCCTTCGAGAGTGTAATTAACGATTAATTGCTCTCTA CAGGATGCAATTAACGATTAATTGCTCTCTACACGATGCAATTAACGATT AATTGCTCTCTTTAAAGGTGCCAAATAAGAAAATAGGTTCTAGAGTTGAC AAAAAAAATTGCCCTTCGAATCTCCTGCAGTTTTTGAGTGAATTGATACT TATCAAGGGACATTTTACTAACGGTTTTTTTTTTAAGTCTGAAAATCAAA TATCTGAGGCTACCAACGGATTCAGCGTGAAAAGTAGATAAAGAAAATGG GGTTATTTGTTAAGTTTCGACCACCTGGTGCCGAGAAATGGCATTTTTAA GGCGAAAAATCTATGTTTTTGGCGTTTTCCGATGACGTCAGCATTTTCCT AGAGGGATTTTCAGAAAAAATCATTCTCACGGCTGGATAGCCCTGAATTA GAAGTATCCAAAAATGGTATGGTTTGTCAGTTTTCGATGTCTAGATCTCA AGATATTTTGGTTTAAATAAAATTATCGATATTTTTTGCTGATTCAGCAG TTTTTCAGCATATTTACCCACCTTAAAAATGAAATATCTCAAGGTCGGAA CATCGAAAGTTAACAAACCATACCATTTTCGGATACTACTAATTCAGGGT TATCCAGCTGTGAGAATGACTTTTTCTGAAAATGCTCCCAGAAAAATGCT AAGATAAGCTCATGATAAGTTCTATCGATTAACTAAAAATCGATTCACTT TTCAATTCTATTCAATTCTACTATTAGGAGCATAATATCAATTCTGGATC TCGGACGCTTGACTAATGAGCACTGCTCTTGTTTTGAATACTGAAAACCT CTGGATAAATCGCTGTGTTTTAAAGATTCTTTTATTTGAAATTTCTATTG ATAAACATCTTTTGTGAAAGTTGTCTATTATGTTTAAATCTATTAATAAG AAATTCCCGGTGAGGGTCACTAGTGCAATGCCGGACAAAAGGTTGTAGAC AAATGAAATTTCAGTGAAAAATGATGAGAAATAGAAAAAAATGACTCTTC AATGTGTCTGAAAGGGGATGGAAGTTAAGAAAAACACTTTTGAAGTCGTT GCATTGCTTTTGAATTGCTTTTGAGGGAACCACAAGCAAAAAANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAAAAATCAGCGTTTTGATAC TGGTGTAAGCCAGTTAATCAAGCCCTTGTGGTTTGCCCTTGCGGTTAGAC TGCAGTGGGTGACTTTGAAAGACTTTCGATAGGTTTGGATAGGTTTGGAA AGCACCCAGAGCCTCTTGGGAACTTGTTTTTGATCGATACTGAAGTATTT TGCAAATATTGCAGAAGTCTACAAACCTTTTGTCCAGCATTGTGGCCGCC TATAGCAGTGCCTATAGACCAAGAATAAGGCCTAAAAGCCTGGAGCTGTC TACTCTTGTCTCCCGAATAGATGTCCCCCGCTAATTGTTAAAAGAAAAAA ATCCATCCCCCGCTCTTATTAAGACCCCCCCCCCCGCTAATTAAATTAGA ATGATTCAATATTTCATTACAGTGTAGACCTTAAACTTGTCAAGATTTGC TTATTCGGACCCCCCCCCCGTCTATTCGGGAGACAAGAGTATTGTGTAGA CTAGATTTCAACAAAAGGGAAAGAATTTTTTAATGTACCACAAGTTCAAC ATGTACGGTTAAAATAAAAGAAAATAGCTATTGTGAGTCTTTCTAACTGT TCATATGTCTATGGTTAACTTCACTGCTTTAAAGCAAGAAGTGTGATTTT GACAAAAATTTATATAACTTTTTAATTTGTAGAAAGAAATCATCTAATCA AATTTACTTGAATCCTTCCGGGTTTAGCCTTTGGTTTTATTCAGCAACGA AATGGCTTGTTTTAATATGGTTAGTTCCATTATTATTCCTTTTCTTGATT TAAAGGTTTTGCTTTTGAACAAGAGTGATATCGGTTGCATACTCATCAAA TTAAACTCGCAAGCTTTTTCACATTGGATTGTTACTGAATTTGAGTGATC GTGATTGAAGACAAAGAAATGCGTTTAATCGTGATTAGACTTACCGCTTG GACCCTTTTAAATTTTTTTTAACTTGTTTTAAATATTTTGGGCAGTTTTC AGCCTCATTTTCTTATAAAATTGTTCTTATAAAGTAAAAAAACGTATACT TGGAGTCACTTCTAAACTTCCAAGAGCTTTTGTCTAGAATTCATTATTCC TCTTTTTTAGGTCACAGCGATCTTCTTACTGCCATGTATTATCTTATGTG AAAGTCGACACGAAATAAGCCGTCATTGTTATACCAAAGGAGACCGTGGT GCAAGAGGCGATACTATGATATTATGTTCTGTTTGTTCTGTACATTATGA CCTCGGAAGTAACCAGTAAGATTTTTGTAAAAACATCCAAAATAAAGTCT TCAGATGTTCTTAATGTTCTCAACATGTTCTTATTTTTTGTCATTTTGGC CATTTTCTTAAGAAATATGGTGTTGAGTCCACAATGCTTTAGAAAATGTT TTTAACTTTTTTGCTATCGAAGCCTTATGTTCTTATATAGTTTGTTCTTA TAAAAGAAAAATGTGTAATAGACCTGTCGATTAAGATTGAGTACCGTTGT TTTGCATAAGATGTCACTTCCTGCACTAAGAAGCCAGTGTCACTTTCCTA CCGGAAAAAGAATTTGGGTAGTTGAAAAATGAGCTTCGGAAAGCTAGGTA GTTTCTTTAATAAACTCAAGATACCTTACATTCATGTCGGTTATCCCGGA AAAATCGCGGAAAAATGCTGGAAAAGTTAGGAGAATTTTAGTTTGGGAAG TGGAATCTTATGCCATACGACGGTGTACTTCCTCAATTTAACATTGAACC TTTTTTACTCCCAGTTTCCCAAGATACACAACTGAAATTGAATGCAAACC AGACCAGAACAATCAAAAGTTTTGTTTCCAAGGAGAAGGATATTGTATAC AAAGGAGCACCAGCATCTTTATACAGAAGAAGAAAGCTGATGGAACCATG GAGAATATTTACTATACGATGCATACCGGATGTGAATGTGAATGCCGAAA AACATCCTTCTTAACTAACTTGATCTAATAGATTCAATTTATGATCTTTA TTACGTAATGTTTTCTATTTAAACACCCAAATTTTAGTCAGTAGTGGCAA ATCTTAAACAATTTCTCTAGCTTCTTGTAAAAACGGGAGTGGTTCCGTAG AAAACATAACGTTGTGAGTATTATACATAAAAATATAAGCATTTTTGAAA TCCTTGCACTTTAAGAGGGCACTCTTTTTTGCTCCCTTGTTTGATCCATA CTCGGGTATAATGGAATATATGTGACTATATTTTAATTAATTTTCTTTCC ATAATTTGTGATTTTTAAAATATTTACTTTGAATTTTCCAGGCAACATCT TTATTTCTCAACCAATTTGATTTGATATGTTTGTATGACTAGTACCTGAA TATTAATTTTTCAGAATTTTTTGTTTTATGACGACATCACAAATGGCCTG AAAAACAGGCTTTTAGCCAAAATCGCGAAAAAAGGCAAAAATTAAATCTA AGTAACAGCCATTTTCATTTTCTTACCTGAGCAAAAGTATTCTTATAAGG TACATTCTTATAGAAAAAGCTTGAATCCTAAATAATACACCACAAACAAA GGACTGAAATCATTTTGAAAGATTTTCTGTTTTACTATTGGATAAAGGTG ACCCAAATTATTGAACTTTTCCCTATTAATGCTCCCCCCTAATAATGTCA CCGTTAAAAAGATAAACCAGGATAATAAACTTTCTTTTTATGAGAACAGC TGGATTTTCTTGAGGCTCAGCTGTTCAGTCTTTTTGGTGCTTTGAGCATC AAACTGTTCTCACCATTTTCTTATTTTTAAGTACATTAGGCTTGTGCCCA ATTTTTGTTATTTGATCCTTAAATTGTCTGAAATTCAGTATTCCCAGGTT TGTTCTTGAAATGTTCTTATTTTTTTGGCATTTTTGAACTTCGTCGTTCT TATAATTTTGTTCTTATAACTGAAAAGGAATGTGCTTGCTTTCAAAGAAC ATACTATAATTTTGTTATCAGCTACAAAATAGATAATATCTTAATAAAAT TATTTTATATTGCAGTAAGTATATCAAACTATCAAACCACATACTATTTT T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062817TCONS_00062817Clytia hemisphaericatranscript
TCONS_00062816TCONS_00062816Clytia hemisphaericatranscript
TCONS_00062815TCONS_00062815Clytia hemisphaericatranscript
TCONS_00062814TCONS_00062814Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062816-proteinTCONS_00062816-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_372supercontigscaffold_372:113321..121571 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.79 4.87 4.32 4.16 8.06 5.64 24.32 27.23 23.43 15.97 14.38 12.73 6.18 6.99 12.28 14.45 5.77 6.85 4.36 4.81 67.92 64.39 9.76 10.23 12.74 7.83 4.92 3.98 3.48 3.91