TCONS_00062816 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062816
Unique NameTCONS_00062816
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1916

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062816 ID=TCONS_00062816|Name=TCONS_00062816|organism=Clytia hemisphaerica|type=transcript|length=1916bp
AcgaaactttttaaaagaaatgacAAATTTTTTCACTCTCTCTTTAGATC
ACaaataatgaaaatacaaaatttacaaaatgtgAAAGATATGTGATGGC
AACATCCATGGCAAAGAAATAAAGGATGGATAGACAAACGGCAAAATATG
GTGCTCTAATTTGGGATGGAAATATATATCATGAAATTGAAGATCAGTCA
GGACAAAATTACACTTTTCATGAAGTGGACGACTTGATAATTGAAgacaa
tttcaagaaatttgaaGAACTTCTGGAACACAATCCACATTTGATCAATT
CGTTGCgaacaaaaagaaataaaactaCTTTATTAATGGAGTCCGCATGG
TCCAGAACATGGGCTGAAACTTTTCCAAAACTGGCTGAAAGAAATCATCT
AATCAAATTTACTTGAATCCTTCCGGGTTTAGCCTTTGGTTTTATTCAGC
AACGAAATGGCTTGTTTTAATATGGTCACAGCGATCTTCTTACTGCCATG
TATTATCTTATGTGAAAGTCGACACGAAATAAGCCGTCATTGTTATACCA
AAGGAGACCGTGGTGCAAGAGGCGATACTATGATATTATGTTCTGTTTGT
TCTGTACATTATGACCTCGGAAGTAACCATTTCCCAAGATACACAACTGA
AATTGAATGCAAACCAGACCAGAACAATCAAAAGTTTTGTTTCCAAGGAG
AAGGATATTGTATACAAAGGAGCACCAGCATCTTTATACAGAAGAAGAAA
GCTGATGGAACCATGGAGAATATTTACTATACGATGCATACCGGATGTGA
ATGTGAATGCCGAAAAACATCCTTCTTAACTAACTTGATCTAATAGATTC
AATTTATGATCtttattacgtaatgttttctatttAAACACCCAAATTTT
AGTCAGTAGTGGCAAATCTTAAACAATTTCTCTAGCTTCTTGTAAAAACG
GGAGTGGTTCCGTAGAAAACATAACGTTGTGAGTATTATACATAAAAATA
TAAGCATTTTTGAAATCCTTGCACTTTAAGAGGGCACTCTTTTTTGCTCC
CTTGTTTGATCCATACTCGGGTATAATGGAATATATGTGACtatatttta
attaattttctttccataatttgtgatttttaaaatatttactttGAATT
TTCCAGGCAACATCTTTATTTCTCAACCAATTTGATTTGATATGTTTGTA
TGACTAGTACCTGAATattaatttttcagaattttttgttttatgacgAC
ATCACAAATGGCCTGAAAAACAGGCTTTTAGCCAAAATCGcgaaaaaagg
caaaaattaaATCTAAGTAACagccattttcattttcttaccTGAGCAAA
AGTATTCTTATAAGGTacattcttatagaaaaagctTGAATCCTAAATAA
TACACCACAAACAAAGGACtgaaatcattttgaaagattttctgttttAC
TATTGGATAAAGGTGACCCAAATTATTGAACTTTTCCCTATTAATGCTCC
CCCCTAATAATGTCACCGTTAAAAAGATAAACCAGGATaataaactttct
ttttatGAGAACAGCTGGATTTTCTTGAGGCTCAGCTGTTCAGTCTTTTT
GGTGCTTTGAGCATCAAACTGTTCTCaccattttcttatttttaagtaCA
TTAGGCTTGTGCCCAATTTTTGTTATTTGATCCTTAAATTGTCTGAAATT
CAGTATTCCCAGGTttgttcttgaaatgttcttatttttttggcattttt
gaacTTCGTCGTTCTTataattttgttcttataactGAAAAGGAATGTGC
TTGCTTTCAAAGAACATACTATAATTTTGTTATCAGCTACAAAATAGATA
ATATcttaataaaattattttatattgCAGTAAGTATATCAAACTATCAA
ACCACATACTATTTTT
Run BLAST on NCBI

protein sequence of TCONS_00062816-protein

>TCONS_00062816-protein ID=TCONS_00062816-protein|Name=TCONS_00062816-protein|organism=Clytia hemisphaerica|type=polypeptide|length=128bp
MACFNMVTAIFLLPCIILCESRHEISRHCYTKGDRGARGDTMILCSVCSV
HYDLGSNHFPRYTTEIECKPDQNNQKFCFQGEGYCIQRSTSIFIQKKKAD
GTMENIYYTMHTGCECECRKTSFLTNLI
Run BLAST on NCBI

transcript from alignment at scaffold_372:113321..121571-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062816 ID=TCONS_00062816|Name=TCONS_00062816|organism=Clytia hemisphaerica|type=transcript|length=8251bp|location=Sequence derived from alignment at scaffold_372:113321..121571- (Clytia hemisphaerica)
ACGAAACTTTTTAAAAGAAATGACAAATTTTTTCACTCTCTCTTTAGATC ACAAATAATGAAAATACAAAATTTACAAAATGTGAAAGATATGTGATGGC AACATCCATGGCAAAGAAATAAAGGATGGATAGACAAACGGCAAAATATG GTGCTCTGTAAGAATTATCCCTTCGAAAACCAATCCAACCAAAACCAAAA GAAGTCCCTTTTTTAACTCAGGTTTCCAGGCCTCAAATAGATGTAAAAAT TTAGAAATGTTCTTTGAAGAGTTTTAAAATTGGCATTATTGTTTCATGCA TCCACTATTTCACTTTCATTTACAGAATTTGGGATGGAAATATATATCAT GAAATTGAAGATCAGTCAGGACAAAATTACACTTTTCATGGTCAGTAAAA TACTCTCTTGTTTTATAAGAACCAGTAAATTTTTGTTGAGGCTCAGTTGC TTTAGTATTTTTGGCACTTTGAGCCTCAAATTGTTTATATCCTGTTCTTA TTTAGGCTAGGATTGACATATTTTAAGCAACAAACCAGAATTTTTCGGCT TAAGCACCGAAATTGCATGAAATTTAAGAATTATAGGGTCAGCATAGTTC TTAGTCTATTTGACAATTTTGAGCCTCATTGTTGACAATGACAAAAATGG AAAATTCAATTGACGGATTCAAAGGACTTATCATTTCAAGGAATCGGGAA AACAAATTTGTTCGAGTCAAGGAAATTTCGATTTATGCAGTAAGGATTAC AAGGAATTTTTAACTGAGAGGACCAGAAAGTTTGTTTGAGTGTTTTCTTG AATAACGTTTTTTTAGAAGTGGACGACTTGATAATTGAAGACAATTTCAA GAAATTTGAAGAACTTCTGGAACACAATCCACATTTGATCAATTCGTTGC GAACAAAAAGAAATAAAACTACTTTATTAATGGAGTCCGCATGGTCCAGA ACATGGGCTGAAACTTTTCCAAAACTGGCTGGTAGGTTATTTGACACCAA GATGCAGAAATTTTTATCCGACACGCCATAAAGCTCTGAAGATCGGGAAA ATTTTTAACATCTAGAATATTTAAATTACGGAATTTTGCCAGACCGCGTC AAGGAATCCGCAGCGAGAGGCATGAACCCCAGCCCTCGTTTTCGGCGCGA TTGGTGGGTCCAACCGAAATTTTTTCAAGTTTACGCGCAAGGGTAGTTAC ACCAAACTGGGGATGCGACACATCAAAGGTTGAATATGATTCCTCTCCGA TGGATATATTGGCCCGCTCCTTTAGAGCTTTATCTTGGTCAATCAACTAT CTGTGTGATGGAATTTTGATGTACTGATATCACATCCTTTTATTTGAACC ACAATGTTTTATTACTTTCATTTTTGAAATTGTCCGTTGTTAAATGGGTT ACTGGGTTAGTTATGCTGAAGACCTGTACTTCGGGAAGTTGTTTTATAGC CGTCCAAGTACTTTTCTACAAGATCTTGGTAAGACCCAACAGGAATTGAA CTCTTATTGTCACCGTAGCCAAATACTTCCTTTACACTGTTGCTCTCTCT TACCATGAATAGTATTTCCCACGGCCTTTTTTTTTAAATACGGTTGACAC TGTGTTATTCGACGTTCTACTATTCGATACGCTTCAATAATATTAAAAGT CAACGTCAACAAGAAACTCTCATAAACGACATTCTACTATTCGAAGCGCT CCCTTATTCGACAAAAAGTCTTTTCCCCTGGAAAATCGAATTAGAGAGCA TCAACTATACGACATTTTTAGACAATCAGTCGCACACAGGACCTATGATT TTCTGCACCGTAACCAAATGTTCTAACTTTCGCTCTAACTTTGAATCACA GCTGTTAATATTCTTCTTTACCAGAATATAATCAAGATATATCAGTTGTT GGTATCTATGATCGAAATATAATCCATCGCATTGTAATACATGGTGCAGA TGATGAAGCTCTTACGATGTTAACAACATTATCAAAACACCAAAACATCA AAGATCCATCCATCATTAATGCTGTCGACTCAGTACGCCAAGACACGCCC CTGCACATGGCGGCATATTTCAATAAACTAAAAACTTTAGAGTATTTGGT TGATTTTGATGCAGATTTGACTTTACGTAACAATAAAGGTGAAAAACCTG GTGAACATTTTAAATGCAGCGAGGACACAAAAAAATTGATAAAATCTCTT GGGAAATGACACAGCAGGACTTGAACACAGCGAACGATAAACTTGAGAAG TATCTCAGAATCATTACGAGCCCTGTTTTCGTGTTAACTGTACTTTTACG CATCCAATTTAACTTTTTAATACTTTTTAACTTTTTTAGTTTTAAGGCTA AAAACGTTCTTAAAATGTTCTTATCATCATCATTTGGGAGTATTTTTGTG CAATTTCTGAAGAAATTTGGTGTTTTTAGAGTCCTGTAGAAATGGCAAAG TCTTGTTCTTCATATTTTCTTTATCAATGCCTTTTATCTAAGAGCTTTCG AAACGGTCCTATTTAGCACATACCGTTGTTCCGCCTGAGATTCCACTGTC TCTTTCCTGCAGAACAAGACAAGGTCAGGAGCCGGAGCCCGAATTGTAAA ACGAGTCTCTAAAAAGTCAATGCCTTTTATCTAAGAGCTTTCGAAACGGT CCTAATTTAGCACATACCGTTGTTCCGCCTGAGATTCCACTGTCTCTTTC CTGCAGAACAAGACAAGGTCAGGAGCCGGAGCCCGATTTGGAAAACGAGT CTCTAAAAAGTGGCCAGTCAAAACATAATACAATATATTTCCCGTACCTT TGAGATCAACCCTCTTATATTGTTTTTCGAGAACAATATGTCCCAAAGCG ATTCTGTTAGAATCATTATCTTTTGCGCATAAACAACATTTTTTACGCAT AAATTATGTCATTGATGCAACGTTGATGCTCCATTTCAAACGTCTTCAAC TAGCAAATGGTATTGAATTGCAGAAAATGTCCCACGTGATTCAAAATGAA AATTGAAAATTTTTACCATTTTGATAAGTAACAGTAATATCAATTATTAC GGTACCGAATGAGAGAAAATTTAAAAGTCATGGCTCAAAAAAACATTCCC TCGTATAAAAAAAGATTCCTCCAAAGTTAAAGATTCGAAAAAAAAAGATT CCCCAAAAAATTAAAGATTCCCTCAAAGTTAAAGATTCGAACAATACACG CTTTTTTTTATAAGAATGGTGTAAATCCATTTCATTATGGATATTCTTAA CTTTTTTTGGGAAAATCATCCTAAAATATTCTTACATCAAATTCTTAGGT TAGGATCCTAATTTATACTAGATTTAGTACATACGTCTCAAGCATAAAAT GGCACTTTTGTAAAAGGAGTGAGCCTAACTTGGGGATAATTGATGATTTA TAATTGAAAATGGCATTCTTAGCAAAATTCCATGATGGTGATATTCTTAG CATATTCTTAGTTTTTTGGCCATTTTTATCATGGACATTCTTATAAAGTG TATTCTTATAAAAAAAGCGTGTAATAAAGATTCCCTCAAAAAAAATAAAG TTCCCCTCAAAAAAGAAAGAATCCCCAAATAAAAGAAAGTAAGATTTTTG CCCTTCTCGGCCACCGTAGATATTCATACTTGAATATAACACTTTAGTTT TCGAGGTTGTTCGTATTCTCTTCTTAACTACAAAGGGCTTCAAAAAGGCT AGAGAATATATTGTTAACAATGATANTTCGAGGTTGTTCGTTTTCTCTTC TTAACTACAAAGGGCTTCAAAAAGGCTAGAGAATATATTGTTAGCTTACC TCCAAATTTTAATGTTTAGCTATTTCTCTTTATTTTCTTTTTTTGCATAA TTTAGTGCGATACTTTTTTAATTAATTTTTTTCAATCTAGGGTTGCTTGA TTACGTGGAAATCAAGTAAGTCTTTGAAAAATATTAAAAACTCAATTTTG AAGAAATTGGCGCCCCTTCGAGAGTGTAATTAACGATTAATTGCTCTCTA CAGGATGCAATTAACGATTAATTGCTCTCTACACGATGCAATTAACGATT AATTGCTCTCTTTAAAGGTGCCAAATAAGAAAATAGGTTCTAGAGTTGAC AAAAAAAATTGCCCTTCGAATCTCCTGCAGTTTTTGAGTGAATTGATACT TATCAAGGGACATTTTACTAACGGTTTTTTTTTTAAGTCTGAAAATCAAA TATCTGAGGCTACCAACGGATTCAGCGTGAAAAGTAGATAAAGAAAATGG GGTTATTTGTTAAGTTTCGACCACCTGGTGCCGAGAAATGGCATTTTTAA GGCGAAAAATCTATGTTTTTGGCGTTTTCCGATGACGTCAGCATTTTCCT AGAGGGATTTTCAGAAAAAATCATTCTCACGGCTGGATAGCCCTGAATTA GAAGTATCCAAAAATGGTATGGTTTGTCAGTTTTCGATGTCTAGATCTCA AGATATTTTGGTTTAAATAAAATTATCGATATTTTTTGCTGATTCAGCAG TTTTTCAGCATATTTACCCACCTTAAAAATGAAATATCTCAAGGTCGGAA CATCGAAAGTTAACAAACCATACCATTTTCGGATACTACTAATTCAGGGT TATCCAGCTGTGAGAATGACTTTTTCTGAAAATGCTCCCAGAAAAATGCT AAGATAAGCTCATGATAAGTTCTATCGATTAACTAAAAATCGATTCACTT TTCAATTCTATTCAATTCTACTATTAGGAGCATAATATCAATTCTGGATC TCGGACGCTTGACTAATGAGCACTGCTCTTGTTTTGAATACTGAAAACCT CTGGATAAATCGCTGTGTTTTAAAGATTCTTTTATTTGAAATTTCTATTG ATAAACATCTTTTGTGAAAGTTGTCTATTATGTTTAAATCTATTAATAAG AAATTCCCGGTGAGGGTCACTAGTGCAATGCCGGACAAAAGGTTGTAGAC AAATGAAATTTCAGTGAAAAATGATGAGAAATAGAAAAAAATGACTCTTC AATGTGTCTGAAAGGGGATGGAAGTTAAGAAAAACACTTTTGAAGTCGTT GCATTGCTTTTGAATTGCTTTTGAGGGAACCACAAGCAAAAAANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAAAAATCAGCGTTTTGATAC TGGTGTAAGCCAGTTAATCAAGCCCTTGTGGTTTGCCCTTGCGGTTAGAC TGCAGTGGGTGACTTTGAAAGACTTTCGATAGGTTTGGATAGGTTTGGAA AGCACCCAGAGCCTCTTGGGAACTTGTTTTTGATCGATACTGAAGTATTT TGCAAATATTGCAGAAGTCTACAAACCTTTTGTCCAGCATTGTGGCCGCC TATAGCAGTGCCTATAGACCAAGAATAAGGCCTAAAAGCCTGGAGCTGTC TACTCTTGTCTCCCGAATAGATGTCCCCCGCTAATTGTTAAAAGAAAAAA ATCCATCCCCCGCTCTTATTAAGACCCCCCCCCCCGCTAATTAAATTAGA ATGATTCAATATTTCATTACAGTGTAGACCTTAAACTTGTCAAGATTTGC TTATTCGGACCCCCCCCCCGTCTATTCGGGAGACAAGAGTATTGTGTAGA CTAGATTTCAACAAAAGGGAAAGAATTTTTTAATGTACCACAAGTTCAAC ATGTACGGTTAAAATAAAAGAAAATAGCTATTGTGAGTCTTTCTAACTGT TCATATGTCTATGGTTAACTTCACTGCTTTAAAGCAAGAAGTGTGATTTT GACAAAAATTTATATAACTTTTTAATTTGTAGAAAGAAATCATCTAATCA AATTTACTTGAATCCTTCCGGGTTTAGCCTTTGGTTTTATTCAGCAACGA AATGGCTTGTTTTAATATGGTTAGTTCCATTATTATTCCTTTTCTTGATT TAAAGGTTTTGCTTTTGAACAAGAGTGATATCGGTTGCATACTCATCAAA TTAAACTCGCAAGCTTTTTCACATTGGATTGTTACTGAATTTGAGTGATC GTGATTGAAGACAAAGAAATGCGTTTAATCGTGATTAGACTTACCGCTTG GACCCTTTTAAATTTTTTTTAACTTGTTTTAAATATTTTGGGCAGTTTTC AGCCTCATTTTCTTATAAAATTGTTCTTATAAAGTAAAAAAACGTATACT TGGAGTCACTTCTAAACTTCCAAGAGCTTTTGTCTAGAATTCATTATTCC TCTTTTTTAGGTCACAGCGATCTTCTTACTGCCATGTATTATCTTATGTG AAAGTCGACACGAAATAAGCCGTCATTGTTATACCAAAGGAGACCGTGGT GCAAGAGGCGATACTATGATATTATGTTCTGTTTGTTCTGTACATTATGA CCTCGGAAGTAACCAGTAAGATTTTTGTAAAAACATCCAAAATAAAGTCT TCAGATGTTCTTAATGTTCTCAACATGTTCTTATTTTTTGTCATTTTGGC CATTTTCTTAAGAAATATGGTGTTGAGTCCACAATGCTTTAGAAAATGTT TTTAACTTTTTTGCTATCGAAGCCTTATGTTCTTATATAGTTTGTTCTTA TAAAAGAAAAATGTGTAATAGACCTGTCGATTAAGATTGAGTACCGTTGT TTTGCATAAGATGTCACTTCCTGCACTAAGAAGCCAGTGTCACTTTCCTA CCGGAAAAAGAATTTGGGTAGTTGAAAAATGAGCTTCGGAAAGCTAGGTA GTTTCTTTAATAAACTCAAGATACCTTACATTCATGTCGGTTATCCCGGA AAAATCGCGGAAAAATGCTGGAAAAGTTAGGAGAATTTTAGTTTGGGAAG TGGAATCTTATGCCATACGACGGTGTACTTCCTCAATTTAACATTGAACC TTTTTTACTCCCAGTTTCCCAAGATACACAACTGAAATTGAATGCAAACC AGACCAGAACAATCAAAAGTTTTGTTTCCAAGGAGAAGGATATTGTATAC AAAGGAGCACCAGCATCTTTATACAGAAGAAGAAAGCTGATGGAACCATG GAGAATATTTACTATACGATGCATACCGGATGTGAATGTGAATGCCGAAA AACATCCTTCTTAACTAACTTGATCTAATAGATTCAATTTATGATCTTTA TTACGTAATGTTTTCTATTTAAACACCCAAATTTTAGTCAGTAGTGGCAA ATCTTAAACAATTTCTCTAGCTTCTTGTAAAAACGGGAGTGGTTCCGTAG AAAACATAACGTTGTGAGTATTATACATAAAAATATAAGCATTTTTGAAA TCCTTGCACTTTAAGAGGGCACTCTTTTTTGCTCCCTTGTTTGATCCATA CTCGGGTATAATGGAATATATGTGACTATATTTTAATTAATTTTCTTTCC ATAATTTGTGATTTTTAAAATATTTACTTTGAATTTTCCAGGCAACATCT TTATTTCTCAACCAATTTGATTTGATATGTTTGTATGACTAGTACCTGAA TATTAATTTTTCAGAATTTTTTGTTTTATGACGACATCACAAATGGCCTG AAAAACAGGCTTTTAGCCAAAATCGCGAAAAAAGGCAAAAATTAAATCTA AGTAACAGCCATTTTCATTTTCTTACCTGAGCAAAAGTATTCTTATAAGG TACATTCTTATAGAAAAAGCTTGAATCCTAAATAATACACCACAAACAAA GGACTGAAATCATTTTGAAAGATTTTCTGTTTTACTATTGGATAAAGGTG ACCCAAATTATTGAACTTTTCCCTATTAATGCTCCCCCCTAATAATGTCA CCGTTAAAAAGATAAACCAGGATAATAAACTTTCTTTTTATGAGAACAGC TGGATTTTCTTGAGGCTCAGCTGTTCAGTCTTTTTGGTGCTTTGAGCATC AAACTGTTCTCACCATTTTCTTATTTTTAAGTACATTAGGCTTGTGCCCA ATTTTTGTTATTTGATCCTTAAATTGTCTGAAATTCAGTATTCCCAGGTT TGTTCTTGAAATGTTCTTATTTTTTTGGCATTTTTGAACTTCGTCGTTCT TATAATTTTGTTCTTATAACTGAAAAGGAATGTGCTTGCTTTCAAAGAAC ATACTATAATTTTGTTATCAGCTACAAAATAGATAATATCTTAATAAAAT TATTTTATATTGCAGTAAGTATATCAAACTATCAAACCACATACTATTTT T

Coding sequence (CDS) from alignment at scaffold_372:113321..121571-

>TCONS_00062816 ID=TCONS_00062816|Name=TCONS_00062816|organism=Clytia hemisphaerica|type=CDS|length=1161bp|location=Sequence derived from alignment at scaffold_372:113321..121571- (Clytia hemisphaerica)
TTTCCCAAGATACACAACTGAAATTGAATGCAAACCAGACCAGAACAATC
AAAAGTTTTGTTTCCAAGGAGAAGGATATTGTATACAAAGGAGCACCAGC
ATCTTTATACAGAAGAAGAAAGCTGATGGAACCATGGAGAATATTTACTA
TACGATGCATACCGGATGTGAATGTGAATGCCGAAAAACATCCTTCTTAA
CTAACTTGATCTAAGTCACAGCGATCTTCTTACTGCCATGTATTATCTTA
TGTGAAAGTCGACACGAAATAAGCCGTCATTGTTATACCAAAGGAGACCG
TGGTGCAAGAGGCGATACTATGATATTATGTTCTGTTTGTTCTGTACATT
ATGACCTCGGAAGTAACCAATGGCTTGTTTTAATATGTTTCCCAAGATAC
ACAACTGAAATTGAATGCAAACCAGACCAGAACAATCAAAAGTTTTGTTT
CCAAGGAGAAGGATATTGTATACAAAGGAGCACCAGCATCTTTATACAGA
AGAAGAAAGCTGATGGAACCATGGAGAATATTTACTATACGATGCATACC
GGATGTGAATGTGAATGCCGAAAAACATCCTTCTTAACTAACTTGATCTA
AGTCACAGCGATCTTCTTACTGCCATGTATTATCTTATGTGAAAGTCGAC
ACGAAATAAGCCGTCATTGTTATACCAAAGGAGACCGTGGTGCAAGAGGC
GATACTATGATATTATGTTCTGTTTGTTCTGTACATTATGACCTCGGAAG
TAACCAATGGCTTGTTTTAATATGTTTCCCAAGATACACAACTGAAATTG
AATGCAAACCAGACCAGAACAATCAAAAGTTTTGTTTCCAAGGAGAAGGA
TATTGTATACAAAGGAGCACCAGCATCTTTATACAGAAGAAGAAAGCTGA
TGGAACCATGGAGAATATTTACTATACGATGCATACCGGATGTGAATGTG
AATGCCGAAAAACATCCTTCTTAACTAACTTGATCTAAGTCACAGCGATC
TTCTTACTGCCATGTATTATCTTATGTGAAAGTCGACACGAAATAAGCCG
TCATTGTTATACCAAAGGAGACCGTGGTGCAAGAGGCGATACTATGATAT
TATGTTCTGTTTGTTCTGTACATTATGACCTCGGAAGTAACCAATGGCTT
GTTTTAATATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039354XLOC_039354Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062816-proteinTCONS_00062816-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062816-exon-scaffold_372-1575043694:121415..121571TCONS_00062816-exon-scaffold_372-1575043694:121415..121571Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1575043694:121182..121246TCONS_00062816-exon-scaffold_372-1575043694:121182..121246Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1575043694:120591..120755TCONS_00062816-exon-scaffold_372-1575043694:120591..120755Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1575043694:115603..115689TCONS_00062816-exon-scaffold_372-1575043694:115603..115689Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1575043694:115107..115261TCONS_00062816-exon-scaffold_372-1575043694:115107..115261Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1575043694:113321..114607TCONS_00062816-exon-scaffold_372-1575043694:113321..114607Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1510915933:121415..121571TCONS_00062816-exon-scaffold_372-1510915933:121415..121571Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1510915933:121182..121246TCONS_00062816-exon-scaffold_372-1510915933:121182..121246Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1510915933:120591..120755TCONS_00062816-exon-scaffold_372-1510915933:120591..120755Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1510915933:115603..115689TCONS_00062816-exon-scaffold_372-1510915933:115603..115689Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1510915933:115107..115261TCONS_00062816-exon-scaffold_372-1510915933:115107..115261Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1510915933:113321..114607TCONS_00062816-exon-scaffold_372-1510915933:113321..114607Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1491911889:121415..121571TCONS_00062816-exon-scaffold_372-1491911889:121415..121571Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1491911889:121182..121246TCONS_00062816-exon-scaffold_372-1491911889:121182..121246Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1491911889:120591..120755TCONS_00062816-exon-scaffold_372-1491911889:120591..120755Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1491911889:115603..115689TCONS_00062816-exon-scaffold_372-1491911889:115603..115689Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1491911889:115107..115261TCONS_00062816-exon-scaffold_372-1491911889:115107..115261Clytia hemisphaericaexon
TCONS_00062816-exon-scaffold_372-1491911889:113321..114607TCONS_00062816-exon-scaffold_372-1491911889:113321..114607Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_372supercontigscaffold_372:113321..121571 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.06642 0.238363 0.615517 0.903444 2.83528 0.658024 3.67009 4.71128 17.0786 9.39051 8.96048 9.15902 0.154881 0 0 0.194971 1.12475 0.331866 0 0 39.1363 27.5832 2.69894 4.23725 0.387021 1.10719 0 0 0 0.201389
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029034Cystine-knot_cytokine
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062816 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top