XLOC_039002 (gene) - C. hemisphaerica

Overview
NameXLOC_039002
Unique NameXLOC_039002
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_362:768172..777881+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039002 ID=XLOC_039002|Name=XLOC_039002|organism=Clytia hemisphaerica|type=gene|length=9710bp|location=Sequence derived from alignment at scaffold_362:768172..777881+ (Clytia hemisphaerica)
CATAGTAAACAAAGGGTACAGGGAAGAGAAAGGAAAAGAAACTAGCTTGG TCATTCATCAATAGAAGACATTGGAAGGAAGAGCTAAACGTCTCGTGATT TATTATGTAGGCTTTTTTTGGCATGAAAATTAATGTGTGTGTAACGAAGA GGAAGGACAAACGATTGAAAAAAAGTACCAGTAAAGATTTAGTATTGGAT GGATACAGTTGTTATTAAAACGAAGCAGGTNGTACCAGTAAAGGATTTAG TATTGGATGGATACAGTTGTTATTAAAACGAAGAAGGTATTGATGAAggc tttcttgttgttttttttgtctacCAGTTTACCATAGAATGACAAGTGGT ATGGTATTGAGGGACTATAGATGTGGAAACCTGTCTaaaaccatagtcat tataaaaacactggtctggaacgCTTTTGTCTCATACCAATTTTCAAATG GGAAAACTACCCAATTGTGACGATTTAGTATCAAAAGGAAATGATATAGA CTTTCAGATCCATATGCATGGGCTTCAGTAACTAAACAGCTCTCATCTCA ATCTAACATAAAAAACTCTCGGAGTGCATCAAAATTTCTTATATTCGAGG TTATAGTGAGCAGAACTTTGTGGTCTAGTCACGAGTATAGAGAATAGAGG TCGAAAGATTAAGCAATGGTCAATGAAAAGGGTATAACTgtgaaaaagtt tcaaaatgtcACATTCAATCTGAATACAAGCTAAATTAATAAATGATCCA TTTCGAATAATTCAAAATATGAGTCATTCATTTCAGCTATTCATTTCTCA TAAAACAAAATGCTAATAATTTGCTTCACTCCATAAACCTTTTACCATAA GAACCGGAAAATCTTCGGTATGGAAAGCATGCTTACTTTAGAATGTAgag tttcacagaatttaatcatcaaaataattatttcatctttttaaataatt atgaTGGTGATTATATAATAACTTGATTTAGAGAGATCATCATCTCGAGG AACCCTAGACCAGCTTTCGTCAAGAAGGAATTTATGGAATTTGCTTATTc tataaaaaaatcaactttttataagaatttcaaAGCAATGAAAAGCTGGA CattcaaatttaatgaagaGACTCATTCAAAAACCACCTcctgcacgttt tttttataagaacaaactatataagaacataaggcttggatggtcaaaat ataaagaacactttaagaCTTTGAGGACTCTtaaaaaaccaattttctta agaaattgcacagAAAGACCCAAAGAAtagtaaaattaagaacattttaa gaacattctaaggcttaaaactgaaaaagttaagaacatccgaaggcttc aaaattttaatttttcttacaaaaaagcgtgtatcaaatgaatcaaaaat attcttctaGAGCAATcgagaaataaaaataaagttatTCAACTTAGCAC AAACTCTTcataaatgaattaaaaaataccaaatacAGTATACAAAAATC AAGAACTAGGGATTTAGCAAAGATACGTTCTGTTATTGAATTCAGTGGCA TTCTTATTGAGGTGGCATGAGAAATGTGTTTAGACTTTTATCAACGATTG CAACTAAAGAAGTGATTTTTACCAGGACGAATCTCACCAGACAAAACTTT CATCAATATCATCAAATACTGTTTTTAAACAACGTTCGACATTTAAGTGT AGCTGAACCAAGAAACTTAGCTAAGCCTATGGTTAGTATGGTATATATGT CTTTTGCGTTGAATGACCTTTAAATAATTGTTAATTTTTAACGAGTGAAA ATGCATGCTTTTCCTATAAGAATggaattttcccattttcttaTGGATAT TCTTGTAATACATGCCCCAAGCAAAAATAtcgtattttgtttttgttttg agcattgctggGGGATAATTAGCAATATTTGCTCgtaaaaatgcattaaa aatgacaATGATTGGTTCAGTGGCCGAATTCCATGAtgattttggccaat ttcaaaCAATCATTCGAAAATGCttatttttgaggatttttaagCATTTC ATTCAATACTCTTAATGTCCTGACCGAATAGTTTTCCAAATGTTTAAAGA GAGTGGATTTTTGATTAGCCTGGATGCTTCTTTAGATACTGAGTGGCGAA atgaatacacttttttatataagaaccagtaaaattttgttgaggctcgg ctgttcttattttttctcgGCACTTTGatcctcaaattgttcttaaattt cgttcttatttatagggtgtaattgaggtGTTTTAAGccttatacccaat ttttactactttgaccccttaATTGCTTTAAATtgagtaccttatcggcc ctttttacgccggcctaattttgggcttacgccaattaagGCCCAAATCC GGGGCCCaaataacgccaaaacttgtaaaaatcgctattcaggcttcaaa acagtaagtattagctaaaatttacattaaaatgtcatctttcagtatta aactgttgaaaattctattaaaaatcattgattttcgtGAAGTTTTGGAA ATGGAGTAAAAAATGGATAGCTTTCATCCTTTAATcatgcctaaaatcct ttaaattgagaaaaaatggtcaaaattaacgccgcttttaggtaaaattt gcaaaattttggcccttttacgccggcccttttaacaccggcccttatta cgccacgagcccaaaaacaACACCactaagggccggtgtaaaaagggccc aTAAGGTAATTTCAAGCTCaaagcgattttgagcctcattgttgttataa aattgttcttataaaaagagcaTGGTTTGGGCTATGCGTTTGAATTTCCC AACTCCAAATAACAGTTGATagcacagccaatcaaattttgctaTTCTTT CACTGGTCtcactttcttagaaaaaaatcgattaattttttataaCATTA AATTCGATAGAGAAATATAGAATATATAAATCGGAGTCAGAGATCGCACC CATCCTGCCTATCTAATTTATGATGGCATTTAAAGGTTTTACTTTTacgt aagtgttcccgtttcatatcaggcacatatttcatatcaatcagtgtctt gctattgttatattatgctgatataagtaattcctctttctgaccaatct tgctccacatccgtgtcaatccaatgtgaaaaagcttgtgaattaaaatt gacgagtaagcaaacggtatcactcttatttaaaaacaaaacctttaagt cttGACACTCACGTTTCTTTCAGGGCGGATGGTCTAAAATGTGTATAAAA GGTctcaattattttttgttatagCAATTTTTcctcttattattttttta tctttatttgaaattttgagtctcAGTGTATTTTTTAGCCAAAACCGAGC ATTGTTTTCTAATAGAAATAACGGCTTGAAAGTTTTAAACCCTGAGTCCA ATGAACTTGATTCcacaaaatcatatttcaacATGAAAATTTACACCACC CACCccctttttcaaaattcacataaaaaaacttgaaacgAAAACTTGTA AATGAAAAAGCTGTGTACACATAGAAGAAGAATGGGAAGGAAGGAACCCA CATGGTAACAAACTGCGAATAGCAACGAATTCTAGTTCAAAATTGCGAAA TTGTAAAATCAACAAATTTCGAAATCAAACTTGCTTTAAATGAATTATAT TTTGTTAATGAGTGGGTAGGGATAGGTAATGACACAACCTGGCACATAAA ATCTTTTGCGATTTTTCGTATTATAAATTGGCATTTTTCATTTCCATGTT CAGACAAGTTTGGATCGGATATGTACGCATCGAGTTCGTTTGATTGAAGT GCGCTGTACGAGAAATTTATCTATTCGGTTACAGCACAGCTTATTTGAcc tttggaactaatttttgagGTAAAATAAGAGTTTGAgagttagttcatct aatgtttccagctcacccaaatagagacttatacgcGTGCGTAATTTATC GTTATTTAAACCTCTAGTCGTTAAATAGTCACTGACCAGGTCGGGGTTTG GGACGGCAAAATATGTCTTTCTTTGATAGGTAGGGTTACTGTTAGGGTTT TTCGTTCTTGTTGTCGCTTTTTAGAtagtctggaaacgttagatgaacag tctctgACATGTGTTTGAATTTAAACCAGGAATGGCTCAGCATATCCTAA ATTCTTCACAAATTGCATGATCAAACTTTCCCGAAAATGTTTCGAGTCAG AGTAGAGGGCGTTAAAGGGGTGGTTAATTGTTTTGTCTGagaagtactct taggttccaaataaacgggggggttcgaataaacgggggggttggaaaat tttgtagatttcaataaatggggggacctaattgccgggggggttggaaa ttgtacttctgaaacccaaaaataaggtaaaaataggctaaaatcaggct atatagagcaaaataaggggccttctcttcgacagctcaaaatattctta gagattaataaacggggggtcctaataaggtccgggggggttggaaaatt ttcgaaaaattaacaagcgggggggcccgtttatttggaacctaagagta aagaAAGAAGGAATATGTTTATTGCAAATCCGCCGGagatcattttgaag aatttcgtTTGTTTTCATAAACATGAAGTAATACTCAAAGTAAAGTGAAA AGTTTATAACTACAATGTTACACAACTTTACTACGAATCtaaattaaaag ttttaatttgaaTTCACACATGGAAAATCTGCTTGGTACTCATCAAGCAT TTTAAGGTTGGTGACCTTTCCTGTTTTGTAGGAAGAAAAGTAAAACACAC AAGAATTTACTAAATTTGTTAtttaaaagttatgaaattTTAGGGTTAGG CTCAAAGTATCCTTGAAATCTTCTACAATCCCCCAACAAATATCTTGAGA CAGAAGATTTCGAAACATTTTTGGAAGATAAAAATCCGTCCCCCGGACCC CACTGTCAGTGTTGAGTCCGGAAATGGCCGAGAACTCAACGCTGACAGTG GGGGAAAGGGGGACCATGTGAAGTGTCTCAGATATAAATTGGGGGATTgt agttaaaggttttattttcatttaagtgttctcgtttcataccagacaca tatttcatatcagtacagtgtcttgctattggttatattatgctgatata agcaaaaaaaaatgttttcttttcctctttttgacaaatcttgctccaca tacacgtttttttttataagaacgtcaaaaatttttgaagccttcggatg ttcttagttttttggatttgaagcctaaaaatgttcttaaaatgttctta tttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNtaagtctccaaagccttagaattttcttagaatg ttcttaaatttttgggcctcgaagccttatgttcttatatagtttgttct tataaaaaaaaaacgtgtacgtgtCAATCCATTGTTAAAAAGCTTgttaa ttaaaattgatgagtaagcaaacgatatcactcttatttaaaaacaaaac ctttaaataccATTCATTAGCCACCATTTGTAGTGAAGTACGTAATGAAG AATTtggaaacaaaaacaaacaatgattgtttattttgttgaagtttATG TTTGATGCTGGTCATGTGAGTGAGTAAGAAGGTAAACTGATTTCGAAAAT GAGAGATATAATCTTTACTAAATCTGTGCGGTCAAGAAATCAAGTGGCAA GTGACGATGGAAAAATCAAGGCAAAGGCACAAGGAGGCTGATCAAAAAAC CTTGTTGATTGTCAATTAGTTCAGGTACCAATCAAGCTAAATGTTTGTTG CCAATTTGGCAGCATGTACGGTGTAATACGGGAGGGCGTACAGTATGCTG GGCAAGCAACGCTAGTTTTAAATGAAGTGGGAAATCAAATTAACATTAAC AACCTAGAAGATTATCAGTCAAAAATGTTCCGACGAGTAGTTTTGTAGTA GTATAGGTTTGAATATTGATTGAAATATTCTGAGAAAAATTCGAAGAGTG TACCAGTAGAACAAAGATTTCAACAATGAGAAGAGATTTCGCAATCACGT GAGCTATTCAGCATGATAGataagattttcttttgaatgagATTTCACGA GATTTCTCTCAATCGGGTACAAAGGTCGCTTAGAATACTATACTATACTG TACGCTGTACTATTGATATAATGTTTTTCTCTACGACTAGTAGCTTGTGG GTGATAGTAGGCTGAAAACTTTGATGAAGTTGTTCAGTGTTTGAATCTTT CATGTTTGACcttgaaagttttgaaagttgaCCTTTGGAATTGTTATGAT CTGATGATATTCACTTTCCAACTTTCTGATTTGCGgaaaatttgttgttg ttgatgttaTGTAAACTGTTTACAAGTTAAATGTTGTTTTGTGTGCAACT ACTTAATACCGATAacgtaaagtgaaagagttgaAAATAATAACTTCAAG TTTGACGAACAAGTTTGTTGACATTATGCAATCTCTTTGGCAAAGCTCAT CCAACAATATAACGCTCTTTAGGCTTTATATCCCTCCATAATATAAAGGA TAAGAAAAGatcaaaaatttacattttggCATTAGCTTTTTAAAAGATAT CCATTATTCGTTTAATACTTGTCCTCATACAATGACCAAattttgtaatg tttgtaaATCATCAAAATTGGTTCATAAAAGACATCTTGATGTTTGATGA AAACAGCTTTTGGAAATTCTTTCTTATAGCAGGAGGTCTAATCGTCTAGA GGCCAGGGAGAATTATGTAGCTGACATTGATTTGATGTGTTGTGCTACCC AAACTATGATGTAGTAGAATACACCTGACGACCCTTAAAAAAGAGATTTG AAGAGCGTGGAGACTGGGTTGAAATGTACCAGGGAGGATTGACGTCAAAT GTCTATAGTCGCTGAATTGAATTGATAACACAGAATTTTGAAAGGATTCC TTCCTGGTAGGTCAACTCAACTAAGCCCCTTTGTGGCgtttaagaccatg ttcagatgTTACGGCTTCGCATAGCGCCGGTATGGCTTTCGTTACGGATA TAGAGCGTTCCGTTTTGGAACGATGTTGAATCGCAACATCTGAACATGGT CAAATAAGTGTATTAAATCCAATATCTTATTCAggcattttttcttcttt agatAAAGATGACGCAAGTAGCCACACCAAGCGATTACCAACAACCTACA ATCAACCCAAACAATGGTACTGAtaacacaacaacaacaaacacaaAGGA TTCAAAAATCTATATCCACACTGGCAATATTGCGAATTGGACCAATGTCA AATCACGACGATCCAATGAGATGCCAACAAATGAACTCTACCAATCGTTG TGTAGGACTATCACCAAACATGGGTCACAGCAATTAGGAGGTAAGTCGCC TGGaggttcatctaacgttatatggacgttagattcatgtgatattcatg acgtaatgttatctACGGAAATAATCTGGTTTTCGCCAGCAGTGGCAGAT TGGGGTgtttttccgtagaaaacattacgtaatgaatattATGAATTGAG GATTTCATAACTAGTCCTGAGCACATTTCTCTAACGGATCCAGACTTAAA CTAGACCTCTTGAAGGGGCTTGAACTTTCTTAAAGTCCGCTTGGTATTTA AAACGAACGGTTTGAGAGTTTCTGAAAAATCTGGATTCGACAAAAACACA GCCTCGGAATAATATATTTCTCAAGGCTTAGTTGTCTTTTACAATGTTAA TAATTGAATATAACATGGTAACTAAAATACTTCCCATAGGTTGGAATGAA GAGGAAATCCGTATTAATTGTACCAACACTGAGAAGATCGATAGCGTGGA ACGAGGTCTACTCAAAGTCActgctaaaatattcttacaaaaacTGGACA CAAAAAGCATGGTGAACTCTGTTAACTCAACATTGAAACAACTCGGTTTA CACTCCATTGATAGTCTATATCTAGCCTTACCACCGTTCGCAGAAAACCA ACCATTTGCTGAGACTATTTTACCACTTTGGGAAGAGATGGAGCGGTTCC GCGACGCCGGTCTTGCGACGCAAATCTCAACTTGTGATCTGGACCATGAG AAATTGAAAACGTTGGTTGAAATGGTCAAAATCAGACCGGAAGTGAATCA AGTCAACTTAACGTCTTGTTGTCACATGCCTGAAGATTTGGTACAATATG CTAAAGGTAAAatacaaaattcaattttttaaatctacagttgatgctct ctaattcgatcttcaaggaatAAGAGaacttatcgaataagggagcgtcg tttatgagagtttcttgttgacggggactttaaatctcatcgaataaggg agcctatcaaatagtagaacgtcgaattagagagcatcaactgtatcTGC CAATCTCGTTTTCAAATATCATCGCATAGGTGTTCATGGTCTTCATTACT TAATGTTTTATATGGGAAAACCCCGGCTTTtatagccagtagtggcaaac tTGTCAGAAGTTTTCTCTAACTCTAGCTTACATTTTTAAATTTGCTAACA ggcaaaaaccggggttttTCCGCAGagaacattacgtaatgaatataATG AATCTCAACACCATTAGACACATACTCTCGGACACCTTATAATTTTTCCC CGTccgctttttaatttttgggaaaatgtttttgaaagttccctcttttg ccctaattctgttTTATTAGcctatttttcaaattgttgatttcaattgt tctctttaatgacaacACGTGggtcgcgcaatgtttacatttcaatactt ttatgttcttttaatttctttcataGAAATCGGTATCGTTCTACACACGC ATGGCGATCAAGCTGTCATGTTACCAGATGAGAATGTCGAAGCACTCATC AACGTCCTCAAGCCAGACGATGACCGGACTTTTTCGACCGATTGGATTGT CCGTTATGCGGTTGTTGTTAAATGCCGGGGAGTCATCAAGTCTAAAGGTT ACATTGCAGCTATCGATGCTCTCACAAATACAGAGTAACCTATGTCAAAA TGACtcgtattgtttttttttaaatccaccGAAAAGCGAAAATCAAATCT TTTGAACATTGTACTATTCATCAATATTGATATTTGCTGAATGCCGGAAC GTGAAAACCAAATAAGGCAGtaccatattcaatttttctacTATTGAGTT TAACCAGAGGTAATATTTTCAGCATGGAAAGCAAAAGGCTAATCATTCGA ATTTCAGAAACCTTTTGCGAGTAGAGAGCTTTGAATTTCGTATAAATCTT TAGCGATCAGATGATCGATTTTTCGGCTGTTTCTACTCAAAGGATTATAC CAAATAAATGGAGCGAGACTTCATTCAAACTCAAGTACTTTTttatattg ggctcttccagaaaatacccgtgcatggggggggggggggggggtaggat atagtgtccg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062212TCONS_00062212Clytia hemisphaericatranscript
TCONS_00062213TCONS_00062213Clytia hemisphaericatranscript
TCONS_00062214TCONS_00062214Clytia hemisphaericatranscript
TCONS_00062215TCONS_00062215Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062214-proteinTCONS_00062214-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:768172..777881 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GCLMglutamate--cysteine ligase regulatory subunit Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.03 0.13 0.07 96.23 69.29 12.67 14.78 17.37 15.45 12.36 13.69 32.21 26.7 18.09 20.62 18.06 21.13 29.46 56.9 22.12 25.51 11.57 17.9 22.35 27.98 25.71 33.81 5.22 3.66