XLOC_038998 (gene) - C. hemisphaerica

Overview
NameXLOC_038998
Unique NameXLOC_038998
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_362:724145..727993+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038998 ID=XLOC_038998|Name=XLOC_038998|organism=Clytia hemisphaerica|type=gene|length=3849bp|location=Sequence derived from alignment at scaffold_362:724145..727993+ (Clytia hemisphaerica)
aggcttttaaatcgaaatatgaaaacaaATCCGTAGTGTGACACGCAAGT GTCTGGAtagaagaagaacaaattagtggcaaaatgatggagcatttgac gtcacttgcgcGGCTAGTTACACACTCGCtttttgttaatcccatcgaac gataggcggttaggcagcgggtgttctctaattctccaattggCGTCCgg taatgaaaacaaaaaaattaaaaaaggcacgctatcgtgacatgttatga cagaaagtataactgataaacttggtggagttatcaaaacaaatttgttg tcaaagagatttaacagtatgTGAAAATACaagccagatatcaacagtct cATGTTTCgaccaaaaaacatttttcattaaaaacactacatcttgaatt ttctgactttgacatttgacatCCTAACTGCTTTTTACATTAAGTATGTA TATATAATCACACTTAATCACAAACTCCATAAAAAAAACTTGGGAAAAtt cttgaatgaaaaaaaacgcgaaaattaaaacccacgAAATGctatttttc ggatattttttttcgaccgcaaaaattagttcccacggAAAtgagttcca ataaggtatacaTTTTTGTAGCCtgtgtatccagactcaaaattttagaa aaaaactcttacctcatCATACAAAGTTTTAAACTTTTAGAGTCTgatgc aactaaaaaagtctggtacaatttgaatgacacagtctgtgagtgaaccc ttgttgacagaatctcaaaactttggaaacccaggcagacacacataatg acttaccataaaacctcttttacaagcTCAAAAGCCTTTAAACTACATCT AAAcgtcagccacattcataaaggatcctttccatcagccattttgtttg gagatgaacctgtgttttcattttcatttgttcatctttttttgcaatgt cagctttttcTATAAATTATAAGCGCGcatagaaaaatattgaaaacccC GCGAatattctgctcagtgactgggcgcgtattGGCCAATTAGAtgcact cgcatatgcagggacaaatATTCCTGCAGAAGAGTTAGTTGGACCAGacc gtaaaccagagacaaaattataaaaaactagacggtgaaatagtttacgg tctggatatccaggctaacttTTTTGTTACTCACTTATTCCTGCATTTGc taaaaatggacaaaaataacgACAAATGACgtataaaaaacgacaaattt tgcTCTCCATTCAACTCTGACTGACGGTTAGTTTGTCCACCTCTAAAATt ccattcctctttgtttattgCGAAATTGACAACTTATGGTTTTAAAGAAC AATAAATTATGCATGCGTGTTATTAATGCAGGACATGTTAGTCCCACTGt tattatatttcaattttgttttgatgataaaGCTAGTATAGAAGAAAAAT AATGTCAGCCAATTATGATAGAGCAATTACCATCTTTTCTCCTGATGGTC ATTTGTTTCAAGTTGAATATGCACAAGAGGCTGTCAAAAAAGGATCAACT GCTGTTGGTGTAAGagggaaaaatattgttgcacTTGGTGTTGAACGCAA GTCAGTTGCCAAATTGCAAGAACCTCGTACAGTTAGAAAAATCTGTGCTG TTGATGATCATGTATTCCTTGCATTTGCAGGTAATAACTACAGGTGATTT TTGTTAGCACCCAAGTCTGCCCAGATAGACAAGCATTTTTAATTGTTCAG AAGAATTGAATAAGAATGTTGTgatttcaaataaacaaatagtatttttt ttaaagaactgtAATCACAAATCACCCTAAAAACCACTCACAACCATATT ATTGATTGGGCTAGTATCTCTTCATTGCTGACCTCAAATCTTTAacacaa aattaattttaaggtataatttttgattctgttttttttttcttgcaaaa tgtttttttaggaTTGACTGCTGATGCAAGAATTTTGATAAACGCTGCAC GAGTAGAATGTCAAAGTCACAAACTCAATGTTGAAGATTCTGTTACACTT GAATANGCTGATGCAAGAATTTTGATAAATGCTGCACGAGTAGAATGTCA AAGTCACAAACTCAATGTTGAAGATTCTGTTACACTTGAATATTTGACTA GATATATTGCAAGCTTGAAACAAGTAATATTTTGATTGCCTCTTTTAAgg actttttttaataattaaaACTGATTAAAAAGATATCTTGTTTCTTTAAA TCTTTATCTCTCGAGTGCTGCTCCTTGCTGAAGTAGATTCTTTCTTGTCT TAAGACTAACACGATTGTTTCAAAATGGGGCCTTTTCATCTATTCATAGG AGCCTTTTCTGTTTGAAGTTTTAAAGGGCTTGTACAAATAATAATTACTT TTATATTGATTCTTTAGAAATATACACAGAGTAATGGTATGAGACCTTTT GGAATCTCAATGCTTATTGTTGGTTTTGATGATGACGGCACCTCTCATTT ATATCAAACAGATCCTTCAGGAACCTATCATGAGTGGAAGGTTTGTCAAT GAAAAGTTGAACTTGTTTTTCCTTtgtaatgaaataaaaaaatattgctg gGATGCTGAACCCACAAGTAAAAACTAATTGTTATACTTTATTCAAGCTG ATTTAGTTTAAATTCATCTGTTAGCTTCAAGTAAGGAATAAAGGTTTGTA ATCAGTCAATCATTCTTTCTTAGAATGTAGAAAATTtttgtgtttctatt tttcttttaccATTTAAAGTTTATGGACTAGATTTTTATGAGAGTTTATA GaatcagaaaacaaaatttacttCAGCTTAATTTACTGCAATGCATCTAT TGCAACTAGATTTACCATGGTTTGTCAAAATACATGAAACAATATGATAT TCACTAGCAAATTTAATTACCTTACCAGGCAAATGCAATTGGTAGAAGCT CAAAAACAGTTCAAGAATATTTGGAGAAAAATTATGCTGATGATGAGATT GAATCTGACGACTACACTATTAAATTAGCGTTGAAAGCATTATTAGAGGT TTGTTTTTCTGTGTAAATCTGTTTGTATCATCTCTGACAATATCAATTAC ATCAACATTCATCTTTATCTACAATGATTTAATCAATACATCTACAAAAT TCTACCAAGAAACACCACTGTATTATGCAAATTTATTTTCGTTGATATCC TGTGACTTTCTCAATATTTTGAGGTTGATTACATGCATTTTCTTCTTGCA ACACTCTGTACACTTTGTTTTTCCAGGTCGTACAAACAGGTAGTAAGAAT ATAGAAATGGCAGTCATGGAACGTGGAAAACCAATGAGATTGCTAGAAAC CAATGAGATTGAAGAATATGtcaaacaaattgaaaaagaaaaagaagaag aggttgaaaagaagaaagctaAAAAACTTGCACGACAACAAGAACAACAA AAGGAATAAACTTTTCTTTGTGTATAGTTTTTAGTCAAGATTTTCGGAAT GGGTTATGAGTTGCTTCTCTGATAGTATTCTTTACGCTTTGGATGTAGAT AAAGCTTCCCGAAAGATTTTCAGTGTTCtggtcaaaacaaaaataattat tgcttctgattgaaaaaagttttgcttttgtttactagggaaaattatta tttatttaataatgcttagaaatttcaaacatttttgtatTATTATCAAA CGAAAGAAAATATGTTCCAAGTTATTCCTCATTAGTTAGATTTGGGTCTC CTCAATCGTCAAATTATATTAGTCGAGGTTGCAAGTCTGTCTTACTCTTA ACCCATTAAGTGCCATCACTCTGTTATTTCAAATGCATGTACTCACCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062204TCONS_00062204Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062204-proteinTCONS_00062204-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:724145..727993 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PSMA7proteasome subunit alpha type-7 Homo Sapiens
PSMA8proteasome subunit alpha type-7-like isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
114.19 113.19 110.99 104.87 65.16 47.54 71.98 74.8 96.09 79.67 69.92 69.94 53.59 49.74 66.15 69.08 66.38 77.03 25.05 33.92 72.45 68.53 68.23 63.87 76.26 79.71 82.78 64.23 56.12 47.64