TCONS_00062204-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062204-protein
Unique NameTCONS_00062204-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length288

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062204-protein ID=TCONS_00062204-protein|Name=TCONS_00062204-protein|organism=Clytia hemisphaerica|type=polypeptide|length=288bp
MSANYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKNIVALGVERK
SVAKLQEPRTVRKICAVDDHVFLAFAGLTADARILINAARVECQSHKLNV
EDSVTLEXADARILINAARVECQSHKLNVEDSVTLEYLTRYIASLKQKYT
QSNGMRPFGISMLIVGFDDDGTSHLYQTDPSGTYHEWKANAIGRSSKTVQ
EYLEKNYADDEIESDDYTIKLALKALLEVVQTGSKNIEMAVMERGKPMRL
LETNEIEEYVKQIEKEKEEEVEKKKAKKLARQQEQQKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038998XLOC_038998Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062204TCONS_00062204Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000426Proteasome_asu_N
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR023332Proteasome_alpha-type
Vocabulary: Cellular Component
TermDefinition
GO:0019773proteasome core complex, alpha-subunit complex
GO:0005839proteasome core complex
Vocabulary: Molecular Function
TermDefinition
GO:0004175endopeptidase activity
GO:0004298threonine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0051603proteolysis involved in cellular protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0019773 proteasome core complex, alpha-subunit complex
molecular_function GO:0004175 endopeptidase activity
molecular_function GO:0004298 threonine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 249..286
NoneNo IPR availableCDDcd03755proteasome_alpha_type_7coord: 5..242
e-value: 5.1054E-141
score: 397.89
IPR000426Proteasome alpha-subunit, N-terminal domainSMARTSM00948Proteasome_A_N_2coord: 5..27
e-value: 3.2E-11
score: 53.3
IPR000426Proteasome alpha-subunit, N-terminal domainPFAMPF10584Proteasome_A_Ncoord: 5..27
e-value: 2.7E-14
score: 52.4
IPR000426Proteasome alpha-subunit, N-terminal domainPROSITEPS00388PROTEASOME_ALPHA_1coord: 5..27
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 108..242
e-value: 5.9E-40
score: 136.7
coord: 28..107
e-value: 4.8E-24
score: 84.8
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 109..270
e-value: 3.3E-46
score: 157.0
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 2..108
e-value: 2.0E-39
score: 134.8
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 108..266
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 4..107
IPR023332Proteasome alpha-type subunitPROSITEPS51475PROTEASOME_ALPHA_2coord: 20..260
score: 76.925

Blast
[Close]
BLAST of TCONS_00062204-protein vs. Swiss-Prot (Human)
Match: PSA7L (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=2 SV=3)

HSP 1 Score: 368.237 bits (944), Expect = 1.483e-129
Identity = 177/260 (68.08%), Postives = 205/260 (78.85%), Query Frame = 0 
Query:    1 MSANYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKNIVALGVERKSVAKLQEPRTVRKICAVDDHVFLAFAGLTADARILINAARVECQSHKLNVEDSVTLEXADARILINAARVECQSHKLNVEDSVTLEYLTRYIASLKQKYTQSNGMRPFGISMLIVGFDDDGTSHLYQTDPSGTYHEWKANAIGRSSKTVQEYLEKNYADDEIESDDYTIKLALKALLEVVQTGSKNIEMAVMERGKPMRLLETNEIEEYV 260
            M++ YDRAIT+FSPDGHLFQVEYAQEAVKKGSTAVG+RG NIV LGVE+KSVAKLQ+ RTVRKICA+DDHV +AFA LT    I I                      ADAR++IN ARVECQSHKL VED VT+EY+TR+IA+LKQKYTQSNG RPFGIS LIVGFDDDG S LYQTDPSGTYH WKANAIGRS+KTV+E+LEKNY +D I SD   IKLA+KALLEVVQ+G KNIE+A++ R +P+++    E+E YV
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAVLT----IFIGLT-------------------ADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQSGGKNIELAIIRRNQPLKMFSAKEVELYV 237
The following BLAST results are available for this feature:
BLAST of TCONS_00062204-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSA7L1.483e-12968.08Proteasome subunit alpha type-7-like OS=Homo sapie... [more]
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