XLOC_038853 (gene) - C. hemisphaerica

Overview
NameXLOC_038853
Unique NameXLOC_038853
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:301235..310987-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038853 ID=XLOC_038853|Name=XLOC_038853|organism=Clytia hemisphaerica|type=gene|length=9753bp|location=Sequence derived from alignment at scaffold_361:301235..310987- (Clytia hemisphaerica)
AATATTTTCATTTTGTTTTCAGAGATAAAAAATAGAAAGATATAGAAGCC ATACTAGGCTTTCTTAATGGGTGGTCAACAATAAATCCTCCGAGTGTAGA AAAACAAGATAAAATAAACAAAACAAAGCGTAATGCGCACTTTTTACTTC GTTACCATTCTCCTGGTAACCATCACCTTGGCAACATGTAAAAAGAAGAC TGGGGCTGGATTGTTCACTGCCAGTATCGTTGAAGATTTAGTGAAAAATG AAGTTCAAAAGAAAATGCCATCTGCTGCTCACACTAAAACTATGACAGGT GGGTAGTTTTGCTCAGAACTAATGAGAATACAAAACACACAAACAAGCCA TCTTGGCTAACGCATATATCATAGTCAAGTTCCTAAGCAGTAACAATGTC CTTCTTGGCTCAGGACAAAGTTCCCTTCTTGGCTCAGGACAAAGTTCCTC CCTGGAATTTGCCATTGAACTATATAACAAGTGAAACTGTAAACTAATCA CATTTGTTGCCGACTACGAGTATACAAATCACCGTTAGTTCTTCAAAGGG TCATAACTTTTGATTAGACATTGGCTTTTTTTATTGCATTTCTGAAATCT ACGTGAAGTTGTAAGTCAATTAGTGTACAATTTGAAAGTATTTGAAGGAA ACTGGGGCCATAGGAGCCTCTAAAAGTTGAAAGAGGTGAAACTTTCCATT TCTGAAAAGGGCTCGTCATTAAACAAAACCAATAGTCAAAGCAATTTTTT TTTTCTACAGGCGTGCATTTGAAAGAAGCCACAGATGCCATCAACAAATT GGTCGACGAGTCCATTGGTAAGTTTACGATTTCCAAGAAAACTTTTACCT ACAGCCCACGCTTGTGGTGGCTTGTAGCCTTTAGAAACGATTTACTGTGC AGCTAACACGCTGTTGTGATGGCTTGTAGCCTTTAGAAAAGATTTACTGT GCAACTAACACGCTGTTGTGATGGCTTGTAGTTCTTAGAAAAGATTCAAC TAACATAGCATTCTTCTCAAATATAGTGTCTTTTCACTTCCCACAAAGAT GAATCTGTAGAGCTTTCGCAACAACTGTTCACAATAAATGTTTTGTATTA AGACACGTAAAAACACTGACTTCAACCTTAACCTCCTGAATTGGAAATTA AGTCACTTATTTCCCATCCAAAATGCCAAATTGAAAGAAAAGACTAGATT CAATCCGTCATTCTAAGTTTCTTGCTTGAGAAAGATTAAAGATTTTAACC TCTTCGAGGCTTAAACTCAACCATGCGTAAAACAAACATCATTCATTTGC CTTTCCAGTTGATCGAGTACAAGAAGCGGAGAGAGAAGTGTCCAAAATGT TATTGAAAAGTATCGAACATCACATTCAAGATGCTGGAAAAGCTCTCCTC AAAACTGACGAAGGTATTAAACAACATTATATTATGACTATACAGAGTTC AAAAGTTCTGAAAATGACTGGTCCCTTTCTTACCCATTAGGATCCATGCT ATACGACTATAATTCAGGCATTGATAAATTATGGAAGGAAAGAATTGTTT ATACAGTATTACTTCGAATAAACGCCCCCTTCTTTTGAACGCCCCCTCGA ATAAACACCCCTCCTAAAAGGAAAATTATCAAATAAACGCCCCCTCAAAT AAACGCCCCTTCGAATGAACTAGGGAAGGGGCGTTTATTAGAAACTTGTG ACTTTAATACTTCAATACCAGTGTTGATTGGGTTTGAAAAGGAAGATTTT AGTCTTCTTCTAACCAGAGCAGTTTTCGATGCAATTTTAGTTGTTAAACC AAAGAAATTTTGCACTAAAATCCTGATAAAGAACTAAAACAAAGGGTATA TTTGCTCTAAATATTCGACTTTAGACTAATATAATTTAATAAACGCCCCC TTTTTTTAAACACCCCCCCTCGAATAAACGCCCCTCCTAAAATCGAAAAA ATTAATAAACGCCCCGGGCGTTTATTCGAAGTAATACGGTATTGAAATTA TTTCGCAACAATCATCGTATTATCATATAAAACTGTTATTACTGTATTAC ACAGATTATAAACAAATCATTTGTTTATGCCACATATAAAATTGTTTAAA TACCTTTACTTATTACATTAGACTCGTGCAAAGATCGCATCGAAGGTTGT AAAGAACTTGCTAACAGTAATGTTTGCGAAACTTCCAAAGATGCTATGAT TGTCAACTGTCCACACACTTGCAATTTCTGTGGTAAGGAAACATGATGCT AGATACGTATGTAGGTCTGCTTCAAAAAAAAGAAATGAAAAAGATCGTCT AGGGATAGAAGCGCTTGGGAAAGTTGTCGATTTTTTCTTAAAAATATAGC TTTTTATGGGTCGGAATTTATATGTCGTGCTTAATTTTGTCTTTTAGTGG GTTTTAAACCAGTAACAATATGATTTTGAAGCAGATTACCAAAATATTAT GATAGGGTGCTAAAATTATATTTATTCTAAGGACCGCATGCTCGCTTTAT AAATATTTTTTGGACCAACAGCCGTACGCAGTTCAAGATATAGACTTTAG TTAGATCTCTACGGTTAGTGGTTAACTTTCTCTTTGTAAAATTTTGTATT TAAAAAGGAAAAAGATACTCAAAAGAAGAAATATTTTTGTCTTTTCGTGT TAACCACTAACCAAATTACCATTGTTCATCTAAAAATATTTCCTAGAGAA ACTCTCTAAGTCTAAGCCTATTTTTCGAGGAAAAAGTTCTTGCACCAAAA ATGTTTGCAGAAGTTTCTGGAAAAATTGAAGATATAGTTTTTTTTCTAAA TAAAAGATTAAATTAGAAAAGAAAAACACGACAAATTTTATATCTTTTCG GTCTGTTTTCTAGGCATGTTGAGTGAGTTGAAAGACCAAAGCAAACAACA GACACAATCACAAGCAGAGCCAGAACGAAAGCCAAAACGAAAACATAAAA AGCGAAAACATCGACGTCACAAATCAGCACGTTTATCAGCAAATGAAGCC AACATGATCCATCAAAGCATGCTCGATCAGACAATCGATAATTCCAATCT ACCAAACGCTGTTTCATCATTCGGTCAAGAGAGCGTTCCACAAGCAACCG CGTCATCTACACCACAATCTGCTCCGGAAGATACTCAATCTCAGGATGCA GCTGATGCGGCCGCCCAACAACAAGAGGCGGACGAGGCGCAGAAAGAACA AGAAGAGGAAGAACTGAGAAAACAACAACAAGAAGATGAAGCGCGAAAAC AGCAAGAAATAGAAGAAGAAGAAGAAAGACAGGCGGAAGAAAGACGACGA AAACGTAGACGAAGAAAGAAGCTTATTAAACAACACCAAGAACAAGCTGC TTTGGCCACTCCCGAGAAAGGTAAGAAGAGAACAAGACCTACCCGACCAA TGACTGACGACACCGACGAAAAACGAGAAAAAACGTTTTCTAACGACGAA GACGAAAAATTCGACGAAAAGGTTACAAGTGACGCGACTGAAAAACGAGA AAAAACGACAATAAACGAGCATGCTTCACAAACATCCGAGATGGGCTCAG GGTCAGGATCGGGATCGGGGTCGGGAGAAGCAGAAGAAAAGGATGAGAAA CTGGACGATGCTGCAGAATACACAACGAGTAATGTTGCGTCTGCTTTCTC GTCTCCCGACGTACTTGACGACGCACNGACGATGCTGCAGAATACACAAC GAGTAATGTTGCGTCTGCTTTCTCCTCTCCCGACGTCCTTGACGACGCAC AAGAACCTGAGACAAAACAAACCATCACAAACGTCATAAAATCTGTACAG AAAACCGACGATAAACAAACGAAGATAACGGCTAAACCTCAACCACAAGC TGCTATTAAATTAAACCCCGTCTACGCTAAAGCCAGTCAGAAACCTCTTA CATATCAACACAAAGCAGTTAGAGTAGCGAAACCAATAGCTTCATATCGT CAGGTAGCAGTATCTTACCTACCTGCAGCCTCCTACCAGCACCCCGTTGC TGCCTACCAACACCCCGCTGCCGCCTACCGCCAGCCATTGACATACTATA GACAACATGTTGCGACTTACAACAAGCAACTCACTACAAAGACCCAACAA AAGCCTCTTACATTCAATCGAAAACCAGCCCATAATACTCGACAAAAACA TATATCAACCAAATTTTTGGGAGCAATTAAAACGAAAGCTCCAGTACAAC CGAAAGNAAACATATATCAACTAAATTTCTGGGAGCAATTAAAACGAAAA CTCCAGTACAACCGAAAACAAAACATTCAAAAAAGCTTAAGAAACATTTG AAAAGAAAACATAAAAAAATGAAAGCGAAAAGCAATTCAGTTCGAAAATC GTCAATTAAGAGCTCACAAGAAGCAGCAGATATCGTCGATGACGTTCTTG ATAACATGACACTGTGAAAATATTGAAATAAATTTTGAAAATGTTAGCTC TAGTTTACTTCGACGGCTTACTTTTCGCCCTGTCTATTCTAATCGGTTGA GTTGGCGAAAAGTGGGCGCAAAGTTGAACAAAATTTATCAATCGAGCATT AACAATATGTAGATATTGAAAACAGAAGGGACTCGGTGTGTATATAGCAC GGAAATAAACTAACATTGACGGAGCCTTCAAGATTCTGAAGCTGACAAAG GAGTTATATGAACTTAGAGGATGAACATTATCTAGAAATTTTTTTTTGTA GATGCATTTAGTCATTCTAATTATTTTCCCATGTTGGGAACACTAATATG GTTTATAAAAATCGGGTGTTTCCACTCACTGATTTAATCGAGTATCAATT TTTTACCTTCTGCTTTGTACTGTATTCTCTAACCTAGTAGTGTTAGTAAA ACCTCCCATTTTTTCGCAAAAAAAGAAAACTATTTTCTTTAGTCTTTAGC TCAGCAAGGTTAAACCTACTTTTCAGTTCAGTAAAGCTATTGCAACAATG AACAATATGTTTAGAATCAGGAGAATCCAACATACAAGTTTCTAGCATCC ATAGATGAGCAAATCAATATTTTTTCAATAATTTTTCGTTTTCACATCCA AGTTTTTGGGAAATTTTCTTTTTGAGCAAAAGACAGTGCGTGACTCCAGC CTATTATAGACTTAGGTATTTGACGTTATTCCCTTTAAAAATGCCAACCT AGTCTCTGTTTGAGATTTGAGATTTTAAGTGAGTCTCACATCCTTGGTCG GTGTCCGGAAAATTCCCCCCTGGTGAATCCCCCCCGGTGAATTCCCCCCA GTAAATTCCCCCCTGGTGAATTCCCACCCATATATTTTCATATGTGTTTT TGAGTTTCGAAATCATGGACTGTAACCCCCGGGGGGTACTAGGGTTGGCG AATGAGAGGTATGTGCGGACGGGACCTCCGAAAACCGACCCTAAGAGAGA CTGATATTTTTGCTGAAAAGGTGACCCTTAGAGAGACTTTTCGAATTTTT TGTTTTTCGATTTTTAAAAAAAGTCATACCCTTAGAGAGACTTTATTACA ATTTTTTCTCTGGAAATCAAAAAATTTTCTAAAAATCCTGAATTTTCCGA CCCTTAGAGAGACTAATTTAAATCTTTCAATCGAAACAAACCTCCAATTT TAGGGTCAAGGATTTTTACAAAGTTTTAAGAATCACAACTGGCTTCTTTC AAATTACATGATTTTTTAGTTCACCAGGGGGGAATTCACCGGGTGGGAAT TTTCCGGGGGGGGGGGGGAATTCACCAGGGGGGAATTCACCGGGGGGGGG GGGATTCACCAGGGGGGGAATTGTCCGGGAATCGTTAATCCCTTGGTCAA AGGTATTATATGAAGATATAAGAGGCAGAATGGCAATAAAAAGAAAACTT TATTGGCCTGACGTAAGGTCAAAGCGAAGAAAGTTTTAACGAGTATACGA ACTGACAACAAATAATCGACTTACAACTAAGACACCAATGACAAGACGGA CAGCAACGACCAAACGGACAACTTGAACGATAGAATCAGCTGCAGTCCTT TGCATCTCCAATACAATCCATTCTTCTTTCAGAGGATTATTTTACTCTCC ATTGTCACCCATTATGTGCCAAGGAATGTATTTCGTCGTGTGCACCAGGA TGTTGTGATCACAGAGTACCTGAAATCACCAGGAAGGTGAAAAGCAAGAA ACGATGTCATCCTATGTGTAAACAGTAAGAGAATTCGTTTGCCAGTTTCA AAGGTTTTGTTTTTAAATAAGGGTTATATCGTTTACTTACTCATCAATTT TAATTCACAAGCTTTTTCACATTGGATTGACACGGATGTGGAGTGAGATT GGCCAGAAAGAGGAAAAGAAAAACATTTTTTGCTTATATTAGCATGATAT AACAATAGGTAGACACTGCTCTGATATGAAATATGTGTCTGATATGAAAC GGGAACACTTATGTAAAAATAAAACCTTTAAACATATTCTAAAACATTGG GTCTAATCACCATACTAGTACAAAAGGGTACCAGGTCGCTTTCAACTGCA ATAAGAACAATTCTGAGCTTGGAATTACTCAATTTCAAGCAATTGGGCCA GGGATCAAAGTAGTAAAACCTGGGTATAACGCCTAAAATACCTCGATTTC TCCCTATAATAAGAACATAATAAGAACAATTTGAGGCTCAAAGTGCCGAA AAAATAAGAACAGCCGAGCCCTATAAAAAGAATTACTGGTTCTTATAAAA AAAAGTGCATAAGGTGTGCAAAAAGGCCGTTCCCTTTTGATTTTCAACGA TATTCCCCCCCCCCCCCTTAAGCTGAAATTTTCATATAGTTGCATACACG CCGTTCTTGTAGTGTTGTTTTTGATTCTCTTTTCACTGTCAGCGTCTTAG AATTTTAATTTCTCTTACCTGACACTTCATTCATGTTTTCCATAGGATCT GCTTACCATCATGTGGAAAAGATTGCTGTGCAACAGGTGTTCAACCCATG CCACCACCACAAGCTGGAATGTGCCCTCCTGGCTGTCCTTTGGTGAGTGC TTGGTGTGGTTTCAACTATAATTCATATTTCTCTTTAATTCTTATATCTG TTAAGGTAAATAAGATATAAATGTTAAGATATGATCCTAGCATGTTATGA AAGGCGATGGTTTCCACTCATGAGTACACAGCTCAGTTCTTCTACAGAGC ATTTTGTGTTCGAAAAGATTTAGAAATTGTATAAACATGCCCGTATTAAA AAAGACTTCTTCATAGTCAAGTCAATAAATACATTTGATAGCACAAGAGC TAGTCTCCATTTTCAATTTATAAAATTGATTGCTTGTTTTGAAATTAAGG ATTTAGGCTCAATATCAATATAATTTTCACCTTAAACTTAGAAATCATTA CCGAAAGAATTATATAACCTAGCATTTGTCCACCTTGTCGTGACAATAAC TTACTTATTTTTCAAGGCACAAAAATACACGCAGAACAATGGTCGAATAA AATTTGAATTTGACAAACTTTATTTCAGCTATTTCCATCCACTTTACAAA CAAAGAAAGCATTCTATTTCTTTAAGGAGCGTGCCGACGCAAACATGCAA AAATATTGGTTTTCTGCACGAAACCATAAAAAATTACCGTGATAATCACA GTTCGATTAAAAGCTTCTCTGAAAAATTGGCATCTACTACCCAAAATACA AAAATTACCCACCCGTCTCATTCATAGAGTGACCCATGATTGGTTTTTTG TCCACTGCTTGCCTGATTCTAAAATGACGCCATAATTGCGGATGCGAGCG CAACATATATGTAAAACTGATATAACTAAATAACAAAAACTAATTTCTAT TTTTTTTCCAGGCGTGCGCTCCAAGTTGTCTTGATACATGTTGTGGTGGA CCAGCCGCTCAAGCACCTGTAGTTCAAGCACCTCCACCTGTGGCCCCTAT GGCGCCCGCCCAACCAGCAGGATGTTTCGGAGGGTGTATCAACTCATGTG AAGCTTCGTGTCCCGCACAGTGTTGTCCTGGTTACATGGAACCCGCACAA ATCTGTAACGCACAATGTCCTGCATCCTGTGCACCCGCTTGTTCACCTGA CTGTTGCGGAGCCATGATGCCCGCAATGCCACCTCCACCACCACCACCTT CACCACCGAAGAAGGAAGAGAAGCAGCCACCAACTTTACCAGTAGCCGGT CCCTCCCCCTTCGACACATGTCCAGGATCATGTCCAATGTCATGTGCCCC TGGATGTGATTTCGATTGCTGTCGACCGTTCTTGGACCCAAACATCGTAC AAGAAATGAGGTCAGAGGTGCAACCTTCATCCGAAGCTGACAGTCCACAA CCCATGACAAGAGTCATCCATGTCTCACATGTCCTGAGACCAGAGCAACC TCCCGTCCTTGCACAGCGCGCATCTACCAATGCATCTCCGGCGAACTGTC CAAGTGAATGCAAACAGCATTGTAGTCCTTCATGCGCCAAAGATGGATGT TGCACTGATAAAAAGAAAAGAAAACGTAAGAGAAGTCACATTCCTCATTC ACCAAGGATCGCCAGAGTTTATGAAGACATTTATGATAAAGAAATGAATA TGCCCGAGGAAGAGGGTACTACATTCTATGACTTTGAGCCCGACTACTAG TTCAATTGATAAAGTGCAATGAAATCACAAACTGTTATAATTCTTCAGTA ACTACAGTTTAATGAAGGTCAAACTTTTGTATAGTTTTGTATGGACGAGA GTGTTTTGATGTAAACGATTATGCGATGCTCTTTGCGTCAAAAAGTCTTG GAAGATGTCATATCAGAAAGACTGGACACTTTACGTCCAGGAGATAAATA CTATTTAGGGACCCTGAATATGGGTATGAACGACGGAGAACTGACGAACG TATTTTCTAGAGTTTTTACAATGAGTCATATATCAACTGAATATTTTCCT TTTTGATTCATTTTGCAGCCAAAGGGGACTGTTTTCGAGCAATTATGAAC AACCATTCAAATATCTAGGGTGAAGTTTAGAAATAAGATTATACAACAAA TCTAAAGTTTGTTTTTCAACATTTGATTTTCCACAAAAATTCACTTGATT GAAGGTTATGAAGGTATCATTGTTGTTTTCAGGCAAACAGAGTCCACCTA TATTAAGAAGAACTTTCAAAATGGCCGATTAAATGTTTGTTTTTGAAGTA TGAAAAGTCAATTTCACAATACCGATTTCGAAAATTTGATTTAATTGCGT CCATAGTAAAACAAACAATCGTATGAACAGACTCTTGAAAACTTTCGCAA ACACCAAACTTTAATGTGATTATTCTTTCGGTAGAAAAAAAAATTTCCAA AACGTCCCTTTTGACATGCTGCTTAAGACAGAATATTCTGGTTATCATAT ATCATTTTAATCATTGACGTAAAGCTATATTTTTGTATTAGATTTTAGTA TTGAGCGACGAAAGATAGAACCTAAACATATTATTATTGACGAAAAATCG ACACAATACGAATTAGGGATCTTTACTTTCCCAGTTTCCAATACCTTAAT AGCCTATACTAGACGTCACCCGCGTTTTTTTACGCAATTAACGTCTATTC CACTTTGCGACTTTTTCGAATGTTTTGAGCCCGGGTTTTCAGCCTCTAAA CATTCGATTTTTTGACGTCACTTTAAACGTTTGAAGCTCCTGCAGTAGCA AAAAAATCGAATTTGCGTCAAAGTTCTTGAAAGGCTTCTATTTTTCGAAA AGCGTCAAAGTGGAACTCACTAAGAAACGAGATGAAAAATCCCGGTTTTT AGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061983TCONS_00061983Clytia hemisphaericatranscript
TCONS_00061982TCONS_00061982Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061982-proteinTCONS_00061982-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:301235..310987 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0.08 0.37 0.28 4.29 4.44 79.85 85.75 16.97 16.06 50.33 33.89 62.28 51.3 43.83 126.4 85.89 76.63 0.31 0.36 44.77 46.88 33.53 37.02 44.73 51.15 7.25 2.43 0.39 0.44