XLOC_038833 (gene) - C. hemisphaerica

Overview
NameXLOC_038833
Unique NameXLOC_038833
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:1452931..1456470+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038833 ID=XLOC_038833|Name=XLOC_038833|organism=Clytia hemisphaerica|type=gene|length=3540bp|location=Sequence derived from alignment at scaffold_361:1452931..1456470+ (Clytia hemisphaerica)
CTCTTTTGATCCTTCGTAggtttatttaatttgaagtTATGatcttaagg
ctttcttaatcTTTCGCTCCTGTGGTCAATATTGCGGGATGAGAAAGTCG
TCTTTGACGTATGaaaccttcatttttttgtaatgaagagtttttaaaag
atatttgaaTATAAATGATGAATCGAGGCAAGTAAACTGTGGTGATAGTA
TGGAGAGATAATTAGTAATATTTATATTGTCTGTATATTAGCCGATGTAC
CCCCTGGTATGTCACTTTGTTTGTTTATTGTCTGTCCGTGTGTTGACATG
aaccacttttcaaactccagcggctcgtccccgtcggtcgtcaaAGTCAG
TGCCCTCCCTCCCTGGTGATGATTCCAAAATTTACCGCGATTTTGGTGTA
CAAATGGGTTTATTTCCGTTAAGGCTAGGGCAgaccgatccaacatttca
tccaacatgccttttttctgatgttggatGGAATGTCTGGACCGGTTTGt
gtcaattaaaatttttggaaaagattaaaattcaaaaaaagaaaaaaaac
gggTTGGAtggtgttggatgaagtttgatcgccatTAAACATTTCATCCA
ATATTTGTGGCGAGATCAAAGAAGCTCTCTCATTGAGTTGTGTAATTCTT
CGTGTTGGATTGGTTTTGGTGGtacttttttcattattttttgaataaag
ttATGAAATGTTTgactggtttgccctggccCTTATCGAACCAATTTCAT
GACTCCGAAGCACTGCATAGATTTTGTAAAGTAACCAAGATACTGAATTG
TAAATTCCGGCTGTAAAAAAAGTTATGTAACTTGAATAAGGTAAGTTATG
TATGTTGAACATAATAGgttcaaaagatttttcaattaaACGGTGGTGTA
TCGAAGGAGTATCACAGATAATCTTGCTTTGTAATCCAAATCACAGCTGT
ATGGTGATTTTTTATTAAGTGATGCAATCACATCTATGGTGATTTTTCAT
TAAGTGATGCAacataattatctttttaatgaTTCACTCTGAATTCTGAG
AAATGCAGACAAACTATTTTGTGTAATTAAACCATCATAGTCGATAATAG
ATTGGATCATGGAGGTATAAGAAAAATAGGAGTCTAATTTGTCGGtgatt
ggtcgttaaagtcttttgatttcttttatgaaatgtatcaaaagaaattc
taagctcgcccgttgaagtaagagttttttttagtagaactcaagtttgc
tctgaataTTTTAACTATCAGTATTGAAAAAAGCCAATAAGATTTTACCA
ATTGACTAAAGAGCTCACTAAAAATGCACGATTATGAGCATGAAAATCTC
CTTATATTTTTGGACGTAGGGTGTAGGGCGAGGATGGTTGTAAAAACATA
catctcctgtttttctttgtaCCTCCATGATTGGATGTTATTATGCTATT
CCTTCCAGAAGTCTGTAAAGGAACTTCTCAATAGATGACAGTAATTAAAT
CGCTTCTTTCAGTTTCCTTTTCGTTTGTTTTCAATGTAGACACGATAATC
CTGAACAAATCAGAATTCTTGCCATCAATCAAACCTGGAGAAGTACCTTG
CCGATCTGTTTCTCTTGTTTTGACGTAAAGAGGAATTGATTTCCTCCttc
tttcaaaatgtgaaatagttggaaacaaaaaatcttgttttttcaCTATT
CATTCTCTATCCTTTTTGTTTCTGGTTAGTTTTCCATTTCAAAGTGAAAA
TCAGTTAATTATCCCCACTACAATTTTTGAAATGCGATGCAATAGTCTAC
CACAGGAGTCACTTGGGTCATGCGTTTTGCATCAGAAATGAGGGGCATCG
TGAACTTATAAtcgactggacgtctatcttctattgtgtctttgaagcga
gcttcgttaccgcctgtatttcaaaattggtataaaaattgacctttttc
tttatcagtatttcatgctctttcgaatgaaacaaacaattttcaatttt
gacgactatttattttggttgccatagtaaccaatgacgtcagtttccat
ggcaacgggaGCAagagattcctctctagccttTCCATAGGCTGTGCGCA
TCCCTAGAATAGGTTATGATATAGGAGATGCGTAtcatgtataaaattcc
cgtcccaAAATTGTTGAACACCCGTCTGTTACAGAGTTACCTTAAATTTG
GGGTAACTTGTTTCAATCTTcagaaatccaatgattgtattaacctctag
ccattcaaatttttaattaaaattgaatgaaatttgaaaatctcaaaaac
aaaaagacgCCCCCgtgacgggaattttatacacgatacgcagCCATAGG
GGCTaaaaaacatatcagaggggatgtatGTAGCCTAGCCTTCCCGACGC
ATGCCCTTTTTTATCAAATCCATGTATCATTATGCTTATGTGTAGTTCGT
CTAGTAAGATATAAGACAATGGACCCAGCGGTCAAACCATCCGCAACTTG
TGTTTGAAGTTGAAGCTGAAACAGGAGGTACCAATCACGGTTTGTTCGTT
CGACCTCCAGTGATGAAGAAACCAATCATTATCCTCGGTGCTGACGTCAC
TCATTCAGCGCCCAGCGAGTCCAAGAAGCCTTCCATTGAAGCTATGGTGG
GATCGTGCAACCCCGAAGCATCGGAATATTTCTGTGAAGTTCGCGTTCAA
AAAACAAGTCAAGGTAATGGAGGAGATCGAAAAGACAGAGGAGATGATCA
AAAGTCTCCTTTAACGATTCCACGAGAAGACGCGCGTCAAACCGTTGAAG
ATCATCTATTATCGAGACGGTTTCAGTGAAGGACAGTTCGTTCAAGTCAT
CTTCTTCATTGCACAGGAACGTTGCAACACACGATTGTTCCCTTCAGACC
CAAAAGATAGTTTCGGCAAAGCGAGGAACGTACCTTCTGAAACAGTCATC
GATCACTCATCCCACCAAACCTGACGTCTTCTTGGCATCTCATGAGGGAC
TCCAGGTAGGACCttcattattttctttataGTTTGTTTGTAAGCATTAT
GATTGATCTCCAACCATccaaggtttttttttcatttgaaagacATTTTT
CGCAGATCGGCATTTTCTTTCTATTTGTATTTTAAGGGTACCGCCAAACC
AACGCACTACCATTTGCTTTGGGACGATAGCAACTTCTCCAATGACGAAC
TTCAAAGTTTGACCTAGAACCTATGTCATCTTTGCTCTCACTGTGAACGA
AGCGTTAGTTACCCAACACCAACATATTATGCGCATTTGGCCACCGCCCG
TGCTCGCGAACATCACAATGCTATGTTGCTTCGCAACCGAAATCGTATTA
ACTTTATTCCAAAGGAGGActtgagaaaaatcaaaaaatgcaCTAAATCT
AATAAGAAAgccaattttattttatcttaaatttttttatcaatttcacG
AGTTTGACTTTCTCAATCATAAAATATAGGAGCAGTCTCGACCATTTTCA
GTCCCCAAAATTTGCGGAGCATAATCGTTTTGAATCGACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061938TCONS_00061938Clytia hemisphaericatranscript
TCONS_00061939TCONS_00061939Clytia hemisphaericatranscript
TCONS_00061940TCONS_00061940Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1452931..1456470 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.56	0.43	0.32	0.35	0.93	0.84	1.23	0.88	0.37	1.06	0.79	1.33	0.72	1.91	0.62	0.6	0.08	0.47	1.15	1.21	0.65	0.94	0.33	0.46	7.23	4.09	2.15	2.26	1.65	1.11