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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061938 ID=TCONS_00061938|Name=TCONS_00061938|organism=Clytia hemisphaerica|type=transcript|length=1228bp
CTCTTTTGATCCTTCGTAggtttatttaatttgaagtTATGatcttaagg
ctttcttaatcTTTCGCTCCTGTGGTCAATATTGCGGGATGAGAAAGTCG
TCTTTGACGTATGaaaccttcatttttttgtaatgaagagtttttaaaag
atatttgaaTATAAATGATGAATCGAGGCAAGTAAACTGTGGTGATAGTA
TGGAGAGATAATTAGTAATATTTATATTGTCTGTATATTAGCCGATGTAC
CCCCTGGTATGTCACTTTGTTTGTTTATTGTCTGTCCGTGTGTTGACATG
aaccacttttcaaactccagcggctcgtccccgtcggtcgtcaaAGTCAG
TGCCCTCCCTCCCTGGTGATGATTCCAAAATTTACCGCGATTTTGGTGTA
CAAATGGGTTTATTTCCGTTAAGGCTAGGGCAgaccgatccaacatttca
tccaacatgccttttttctgatgttggatGGAATGTCTGGACCGGTTTGt
gtcaattaaaatttttggaaaagattaaaattcaaaaaaagaaaaaaaac
gggTTGGAtggtgttggatgaagtttgatcgccatTAAACATTTCATCCA
ATATTTGTGGCGAGATCAAAGAAGCTCTCTCATTGAGTTGTGTAATTCTT
CGTGTTGGATTGGTTTTGGTGGtacttttttcattattttttgaataaag
ttATGAAATGTTTgactggtttgccctggccCTTATCGAACCAATTTCAT
GACTCCGAAGCACTGCATAGATTTTGTAAAGTAACCAAGATACTGAATTG
TAAATTCCGGCTGTAAAAAAAGTTATGTAACTTGAATAAGGTAAGTTATG
TATGTTGAACATAATAGgttcaaaagatttttcaattaaACGGTGGTGTA
TCGAAGGAGTATCACAGATAATCTTGCTTTGTAATCCAAATCACAGCTGT
ATGGTGATTTTTTATTAAGTGATGCAATCACATCTATGGTGATTTTTCAT
TAAGTGATGCAacataattatctttttaatgaTTCACTCTGAATTCTGAG
AAATGCAGACAAACTATTTTGTGTAATTAAACCATCATAGTCGATAATAG
ATTGGATCATGGAGGTATAAGAAAAATAGGAGTCTAATTTGTCGGtgatt
ggtcgttaaagtcttttgatttcttttatgaaatgtatcaaaagaaattc
taagctcgcccgttgaagtaagagtttt Run BLAST on NCBI transcript from alignment at scaffold_361:1452931..1454158+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061938 ID=TCONS_00061938|Name=TCONS_00061938|organism=Clytia hemisphaerica|type=transcript|length=1228bp|location=Sequence derived from alignment at scaffold_361:1452931..1454158+ (Clytia hemisphaerica)
CTCTTTTGATCCTTCGTAggtttatttaatttgaagtTATGatcttaagg
ctttcttaatcTTTCGCTCCTGTGGTCAATATTGCGGGATGAGAAAGTCG
TCTTTGACGTATGaaaccttcatttttttgtaatgaagagtttttaaaag
atatttgaaTATAAATGATGAATCGAGGCAAGTAAACTGTGGTGATAGTA
TGGAGAGATAATTAGTAATATTTATATTGTCTGTATATTAGCCGATGTAC
CCCCTGGTATGTCACTTTGTTTGTTTATTGTCTGTCCGTGTGTTGACATG
aaccacttttcaaactccagcggctcgtccccgtcggtcgtcaaAGTCAG
TGCCCTCCCTCCCTGGTGATGATTCCAAAATTTACCGCGATTTTGGTGTA
CAAATGGGTTTATTTCCGTTAAGGCTAGGGCAgaccgatccaacatttca
tccaacatgccttttttctgatgttggatGGAATGTCTGGACCGGTTTGt
gtcaattaaaatttttggaaaagattaaaattcaaaaaaagaaaaaaaac
gggTTGGAtggtgttggatgaagtttgatcgccatTAAACATTTCATCCA
ATATTTGTGGCGAGATCAAAGAAGCTCTCTCATTGAGTTGTGTAATTCTT
CGTGTTGGATTGGTTTTGGTGGtacttttttcattattttttgaataaag
ttATGAAATGTTTgactggtttgccctggccCTTATCGAACCAATTTCAT
GACTCCGAAGCACTGCATAGATTTTGTAAAGTAACCAAGATACTGAATTG
TAAATTCCGGCTGTAAAAAAAGTTATGTAACTTGAATAAGGTAAGTTATG
TATGTTGAACATAATAGgttcaaaagatttttcaattaaACGGTGGTGTA
TCGAAGGAGTATCACAGATAATCTTGCTTTGTAATCCAAATCACAGCTGT
ATGGTGATTTTTTATTAAGTGATGCAATCACATCTATGGTGATTTTTCAT
TAAGTGATGCAacataattatctttttaatgaTTCACTCTGAATTCTGAG
AAATGCAGACAAACTATTTTGTGTAATTAAACCATCATAGTCGATAATAG
ATTGGATCATGGAGGTATAAGAAAAATAGGAGTCTAATTTGTCGGtgatt
ggtcgttaaagtcttttgatttcttttatgaaatgtatcaaaagaaattc
taagctcgcccgttgaagtaagagtttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061938-exon-scaffold_361-1491911889:1452931..1454158 | TCONS_00061938-exon-scaffold_361-1491911889:1452931..1454158 | Clytia hemisphaerica | exon |
| TCONS_00061938-exon-scaffold_361-1510915933:1452931..1454158 | TCONS_00061938-exon-scaffold_361-1510915933:1452931..1454158 | Clytia hemisphaerica | exon |
| TCONS_00061938-exon-scaffold_361-1575043694:1452931..1454158 | TCONS_00061938-exon-scaffold_361-1575043694:1452931..1454158 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:1452931..1454158 + |
Blast
The following BLAST results are available for this feature:
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