XLOC_038825 (gene) - C. hemisphaerica

Overview
NameXLOC_038825
Unique NameXLOC_038825
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:1085691..1091283+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038825 ID=XLOC_038825|Name=XLOC_038825|organism=Clytia hemisphaerica|type=gene|length=5593bp|location=Sequence derived from alignment at scaffold_361:1085691..1091283+ (Clytia hemisphaerica)
GTCGGATGTATTAAAATAGGGTAAGGCGTTATAATGCTTTACTCTCTCTT TCTCTCAGACAATttcacaaaataacaaaattgaaagaaaacaaaCCACC AAACAGACCAGATGGAAGGTTTAGGTAAGAATTATCTCATATCAGAGTGC TATCCTGTGACctgatttatatttttattttgacacaTCCGTCTCCTAGA AGGTTTTTTTCGGCAAATTTGGAGTCCCACCGTCTCTATATTACAGGAAC CTCAGAATGAAGAAGAACTCTGCCAAATAAAATATACTCAAATAAAGTCC CCTTCTGTGAATTTCAAACATCctcaataattctttttttattcaagaaa tTGGATTGTTCGTGGGCGGTATTTTGGTGACACTGACAATGATCATCCTA ATCATCAaatcaattatgaaattgaaaCGACCAAAAAGGGCCTGGGAAGA GGACGAATCAAATAACTTTATTGAACAAACACAAAAATCATCAGACGAAA AAGACGGTGATGGTAAAGGAAATCGTCCCAAAATCTTCATGAGGGAACAT CATTTCCACTTACCACTTTCCTATGAAAAGATTCAGAACCAGAAACCATG GAAACACAGAGCTGTACCAACCGTCAGTGTTACTCAGGTAAGTCCTCTCT GCTTTGACCTGGTAGTTTGATCAGAGATATCACGTACACCGCGGTACCAC CCAGAGACGATAGATACCAATACACGAGTAAAAgtaactacagttgacgc tctgtAATTCAACGttttactattcgatacgctcgattattcgataatat tgaaagacACCGTCaataagaaactctcataaatgacGCACTTTTATTCG ATACGTTCCATtttttcgataatattgaaagacaccgtcaacaagaaact gtcataaacgacgctctactattcgatacgctccttattcgatgaaaatt ctccttaaaaatcgaactaaagagagagagtcaactgtagtcTTTGGTTG ATGGCCTTTAGACTAAATATTCATAGTTGCTTTTTCTCACATACAGCATT CTATAAAAACCTTTGGCACATTTTAGCACAGTCCCACATCAGCGAGTGCG CCAACAAACCTTTTGCCTTCATCCTCCGCTGCTAAACATCATGGAGTATT GAATCAACGGAGAAGATCAATCACCAACCAAATGATGGCAGACCTTCACA AACACGGCAAACATGGTATGGTGCAATCCTTTTGATACATCACTGACCAT TTTCTCTTTGTCTATTAATTGTACGCTTTACAGGTGTAATTTCGCTAAAA ATCGAATCGACGCTAAGTCCTAGCGGATAGGTTGTCCGCTACCAATCCTT TTTGTCTAActcagctggcacataacgttgttttaacgtttaaataacgt tcacaacgtcatataacgttaaatgaacgttgaaacaacgttgtgtgcca gctgggaaatgTCATTGCCCCGGGTCTGTATCacattcataatggcagat atgAGCCGGAATATGACCTTTTTTGGATCCGTCGGTAATTAAATCTTAGA TCAAAGCTGAAGAACCCATTCTATTCGAACCATTCTATTTTCAAGGCAAA AGTCTCCAACCACTCTTCGGTGGTCACTCTACTTATAAGAGGAAAAAATT TGACCAGGTAATATGGGGCACCAGGCACCACGTTAGCGTTGAAAAGATTA GAACTGgtttttattctaaaaaatcGCAATGGTTTTCATACTAACTAAGG AACATTTCGAAGAttgcttttctttttcgttttccAGTGATGTATTCATC TTTCCACAGTGGAGCAGAATCAGGTGGTGATTCGGGAAGTGAATATCATT TAGGACCAAATTTCAGCGACGACGGCTCCTTGACCGCTTCAAGCGTTGAA CATAACTCAGCTGATGATGGAAAAGCACATTATTTAGATTCAAACGTACA CGGAATCAAGAAACGTGTTACTCGCACAAGACGTCTCGGACGCAAAACAC ATCACAGTCCTGTTAAACCTTCGTTCAAGAAAACTGGCAAACTTTTCTTC GAAGCTGAATACATACGACATGAACGAAAACTAGTTCTAAACATTATAAA ATGCTCTGAATTAAAAATGAAGACGGATATACACCACTCCAACACTTTTG TGAGAGCTTATTTGGTACCCGGCAAAATTCAAAGACAGCAGACAAAAATA CGACGGGAAACTTACGAGCCGATTTTCAATGAATCTTTAGTGTTCACCGA CCTCGATCAAGTTCAATTACAAAGACATAAATTGAGACTGAAAGTATATA ACCATTCGAAATTGAAGAAACACGATTTGATAGGCGAGGTGGATATTGCG TTGATTAATCTGAATACTGATGCAAAAGAAACTTTTGATGCTGATCTCTT CGTCAAAAAGTCTGAGGTAAATACATTGCTTTTCAATACTACTGTATCCC TGCAGCGATTTTAGTAGGAACGTTAGAGTTTATACTAANAAAAGTGTATA ACCATTCGAAATTGAAGAAACACGATTTGATAGGCGAGGTGGATATTGCG TTGATTACTCTGAATACTGATGCAAAAGAAACTTTTGATGCTGATCTGTT CGTCAAAAAGTCTGAGGTaaatacttttttctgattcaaTACATTGTGTT TCAATACTCCTGTCTCCCTACAGCGATTTTAGGAAAATTAGAGTTTATAC TAAATGCAATATAAACATAATATGAGGGTCCCATCCCTGTTTGACAACAC AGTGTCTCCTGGGCCTGggcttttcaaagaaaaaatgtaaactCTAAAGA TTGTCTATGCAATTCAAGGTTTTCTAATCTTTCCCCTTATGAATGGAAAT GCACTTAAAGTTGGAGGGTAGGACTTTTTCTTTACACTGATTAGTTTGTA TtttgacaaaaacaaaagatatgAAGATAATAAATTTGatacgtaatagt tatcggacataCCAAAAGTTTATATTCTATCTTGGTCCTTTCATTTTAGA ACGCAAACGCTTCAATGATGATCTCAATAAGACACGAAGCAGCTCTTTCC AAACTACAAGTCAATATTGAAGAAGCCAAAAATCTTCCAAAGGCTCATCT GACTGGCCTTAACCCTGGTAAAGCTTTTTAACTTATTTTGGTTCTTCTTC GATGCCAGTTTCTTCGAGAATCCGTTTTAGTCCCTTTAAGATTGTTTAAG GAGTGAGGTAGTAGGTACACGTCATCCTGCAAACCTAGCGACCTGGGCCC CAATGCTACATTATTTGAACTGCACTCGTTAACAAATTTCCACCTTTCGA TTATTGAACTGATAAACAACATACGTTCGAGAATCTTTGGAAATAAACAG TGTGTTAGTATGCCAAGTCAATGTTAGTGGTAGAAAGAGATATTCTCTTT CCCCAGTTGGGCACACAacgtagcctatactagacgtcacccgcgttttt ttacgcaattaatgtctattccactttgcgactttttcgaatgttttgag cctgggttttcgggctctaaacattcgattttttgacgtcacttttaact ttcgaagctcctgcagtagcaaaataatcgaatttgcgtcaaataTGCCG GCCATTCTGTAGCAATAATCAATCTTTCgaatatttagttcaatccaatc cttaatgccgatatttagttcaatccaattcccatatttagttcaatctc tatatttcattcaatccaatccctatatttcattcaatccaatccctata tttcattcaatccaatccctatatttcattcaatccaatccctatatttt attcaatccaatccccatatttagttcaatccctgtatttcattcaatcc aatcccgatattttattcaatccaatcccgatattttattcaatccaatc ccgatattttattcaatccaatcccgatttttcattcaatccaatcccga tatttcattcaatcttttttttcaatcttttttttaattcaatctttttt cattcaatcttttttttattcaatcttttttttaattcaatctttttttt attcaatctttttttttcaatcttttttttttattcaatcttttttttta ttcaatcttttttttcattcaatcttcCTGGGTACGAGCGTAATTATTAT CTCCCTAATGTAGTTTCCACATGGTTTGAAGTGATTTAAGACGTAAAAGT TTAGTAGGATCTGACTAAAGTATGTTAGGAGATCGCACCAGACTTAGAGC ATCCGGTGGTGCTGGTGCTTCTTCTGTTGTTAGTGAAGAAGCTGGTAGCG GTGTTATTTCTGAAGATGATGGAGAACCAATGATTCGTCAGAAGATTTTG ACTGCCCTGAAGGACAAATTTCCACTTTTAGGGCagaatgactttgattt tgTCGAGGTACGACGTAAAGAGATAACAAAAATGAGCTTGGCAACAGGCA TGGAGTATAGTTTCAATGTAGTTAAGAAACTTGCCGGTCAAGGACAGCTA TATGTGCAAGTCAAATCAAATCGTGGAACATTCCTTCATGATGATAACAG TTCTGATGATGAAAAGGACGAGCTTGCTTTACCACCAGTAGGCTGGAAGC AAAAGAATTGTCCTGATCCTTTTGAGCAATTGGGCTCAGATAGGAGTGCT GAAGGTAAATCACAAAATGCAATTGTTATAAAGGAGGAAAAGGAAAACGA TGACACCAATCAAAAGCACAAAGTGGAACAAGTAGACACCAAAGACAAAG AAGAAGTAAAAATTCAACTCAGCCTGAATCCTGCTGTTGAAGCCGCCCTA AACGAAATTATTCAACAAAAACTTTGTGATCCAACAGAAATCATGCGATT TCTTCAAATGAAATTGCAAGTAGGTAGGGAACTAGATATAACACATATTG ACCTTCCAGATGGCGGAGGAGAGTTTGGAGACACCAATTACCTTTCTATA GACAGAGATCAAATCTTACAGTCAACTTTCTCAGAGATGAAAGATNACAA CGTTGCTTCGACGTTTATTCAACGTTcacaacgttagatgaacattgaaa caacgttgtctgTCAGCTGGTTCTGCATTTAAAGGATATCCTCCAAGAAC ACCAAGATAGGcttaattgttttctttatatttttcaacattataGACCC ATACGTGATTGTGAAGTTATACAAAGGAGATTCGTGCGAAAAGAAAGAAA CGTTACACTTACGGAACACGCGTGCTCCCAAATTCCACGAAACATTCCAA TTCCAACTAGCAACAGATTTCGAATATCCTTTAAGCGTTTTCTCATTGGT TGTAACTATAGCAAATAAAGTTCTGATTGGTCGAGACGAAGTATTAGGTC ACGTGATTTTTAGCCTGGATTCGCCTCAACATTCAGCCATCACACACTGG AGGAATGTGCAAACAGAACCTCATAAAACTCACTCACGATGGCATTCCTT GATTGACCCGGAAGATGTTTAGTGGCATTTAACTCAGAgagtcaaaatca ttttaaatatCATCTAGATCTAGAAtctattttctttgtttcaaatGTTA AGTTCAAATGAATgttaaaacttttaaagaaaatatttcgaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061921TCONS_00061921Clytia hemisphaericatranscript
TCONS_00061922TCONS_00061922Clytia hemisphaericatranscript
TCONS_00061923TCONS_00061923Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061922-proteinTCONS_00061922-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1085691..1091283 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.85 2.45 0.91 0.49 2.03 1.95 8.81 10.24 6.03 6.72 3.97 6.2 2.52 2.78 4.68 4.75 3.01 4.79 3.82 3.54 2.25 2.09 1.67 2.13 3.15 2.65 1.25 1.09 0.16 0.24