XLOC_038813 (gene) - C. hemisphaerica

Overview
NameXLOC_038813
Unique NameXLOC_038813
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:526277..533124+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038813 ID=XLOC_038813|Name=XLOC_038813|organism=Clytia hemisphaerica|type=gene|length=6848bp|location=Sequence derived from alignment at scaffold_361:526277..533124+ (Clytia hemisphaerica)
AAGCCGTATATTCtagaagcttttacaaaaatgcaTAATCATTGTGGAGG CATTAATCAATTAATTATAGACGGACGTTTGGAATATTCCAATAGATTAT TTTGCTAATATAACCCTTATGTGGCTGAATGCAAATTACAGaggaagttt tttttaaagtttttcaaaagaaagaaactttAAGCTCATTAAAGAGTTGC CTTCAACGCTCGCAGTGTCTAATTAGATGttttgattcttacaaaaagAT ACCCACCTCAGCAAACATATACAATTACGAAACATTTAGATTTCTCTACA AAAGGGTGTGTGCAAAGAGCAAAGAGATTCATATCAAATCAATTCAATTT CTCTCAACAAGATCAACGAAGCTAATACACTGGTGAGAAATAAATTTGTT TTCGAATCAAATTTTATATTATTGAAATCTTGAACTGATAAGTTTTCTTA CGTAAGTTCGTCTTAGAAAAAAGCAGTTAGTGAATAATCTCAGTAAACGT TAAAAAATTTGtgagaaatcaaaaaagtttctcttgaCAAAGACTTAAGA TTTGCTTGAttacttttctttttagttGAACTACATTCCACGTTATAAAA TTACAATGTCAGCCACAACAAAATATGTTCACCATTACTTCAAAACAGCA GCTCGCGGAGATCCAATCAGATTGGCTTTCTGTGCCGCAGGCGTTGATTT TGAGGACAAAACCTACACGTTCGCTGATATGCCCACAATTAAGGGGGATG GTAAGACTGACGTCTTGTCTAGATAACTGGCTTTTTAGTAGAAAGAAAGG ATCAGAGAAGCCTTAAGATATTCTTTATATTTAATAATGCTTAATGATTT GACGTCCGTTGTTTCCTGCAGCTTGAATCGGAGTAAAGAGCATTGAAAAT GGAACTGAATTTTCTCTAACAATCTAACTCTgtttcaaatttcagaaaag acCTTTCCCCTTGGACAAGTACCAGCTTTGGAAATTGACGGTGAATCATA CGTTCAATCACACGCCATTTTAAGATATATAGGAAACGAATTCGATTTGT ATGGCATGTGCAACAAACAGAAATTGGTCATCGATGAGATTTTGTACACT TTGCAAAATATCGATGAACAGCTGCTTGGCACCTACTTCTTTACTAAAAA AGCCCAAAAAGTAAGACCTTTAAAATCATTTATGTAATTAGGATCTTCCA AATCAATAGTTGAGGGCACTGATTTTCAAACAAAGCGAACTTTCAAATCA TGAATTTACTTCTAAACCAtgtttttcacaaatttcaggaagaaaaattt aagaaaatacaCGACTATGCAGCCAGAGCTTACAAAATGTTTGAAGGAAT ATTACAGAAAAATAATAATGGAAAAGATTATTTCGTCGGAAACAAGGTAA GAAAAAACACTGAGCTTCCATTGCAAACAGACAAAAAACTATAAATTAAC ACGATTCGAGACGGTAACCACGATTGGAAAGTCTACACCCGAGCACCTCT ATGGGTGCTATCAAATGATGCATGGGTCTTGGCACTCCTAGGTCCCTGCT GGCGGTAATCAGTCAAAAACAAACGGGAAGTAACGCACCCTTTCCTCTGG GTTAGCGGTGGGGCGCATATAGAAAAACTTTACGAAAAACAGATAACAGC TAATGTGATAttactttttttattcataGCTATCAATTGCAGATTTACAC TTAGTGTCAAGTTTAGAGACGATGAGCCTTGAAGAAAACACTTTCCCAGG ATTCAAGAATTTCATCGATAATTACCCATTGGTCAAAGCTCTTAACGAAC GCGTCCGAAACGTCGAAAGTGTCAAGAAATTCCTGGAGAAACGAGGAACA CCATTTTACGGCATGCAGAGAGAAATGGCAGCAAAAAATGGGTACTAGGC TAGatattattcaaaattaatGCTTGTGTAGTTGTTAAAAAAAGCTCTCT AGCAATTTTCATTATCTTTATTTATCATAAAATTAACCTTTTgtcaattt gtttttatttgtaaaattcACGATATCTAGAATACGATAATACGGAAAAA ATATCGCCATGTTTGATATTTTCTGAGCAACTATTAGAATATCTTCCCAG ATTGGAGATGACTATTAAAATGATCAAGTAAACACCAGATTCAATTTCAA TCGTAAACATTCATAACACTAGAGCCCCAGAGTTTTTTAATTGCGTTTAA AAGCAGCTTTCCGATGTTTTAGAGGAAAAGAGCACCatataaaagggttt tttggaaatCGAGCCATGCTGGgcataaacaaaaacaatccTTTCTTTCT CTAATCTAACGAAGCAACTTCCAcaaatccaaaatttgggtaaaactttt tcttttaaaaatcttgaagtcTTATATTTTAAGGATATTGCAATTTCGCA TCACTGcgtaaaaaatcaggaaaagctaataaagcaatttcacacaaagt ccaaaatacattttaggcactttttgacCCTAATTTGCccagaaaatcat tttttcgaATATAAGGCtcatcagattttaaacaataccattttttatca ttgtgcaaaaaaatatcaagGCGATCGCAAGAAATGCTCTTTtcccctaa aaatgacaaaatggaatttccccaaatccgatttttacagctaaaaaaat ttttcttggaaaaaacggcttcagccactttttagagaaccttgcaaTTT ATCTTTATgcaaatcagaaaaagctaatgaagtaatttcattcagtccaa aaaaacccgtttttaggcactttttggccgaaatttgCCCCctcccccaa ttttttttttaattgattttaattGATATTCGAGTTCACATTTTGAGTAC TGTCGTTTTGCATCACTATgcgaaaatcagagaaaactaatgggccaatc ccgagaaaacgaacggacggacggacgaacgaacaaaggttaaattAAAA GACCTCTGAAGTAGGTCCAAATAAATCTGGAGCATTTATTCGAAGAAATA CCGTAAATTAGAAAGCGGGAAAAAGACTGGGCAGCTTCGTCTCAGGAGGA CACGGAATTCTCACAAACCGAATGATGGGACACGAAGACTTTGTCTTCTA TTCGGGTGGCGTGGGCAGAGCTGGTCCAAGTTCCTACCGGTACACGATCG AAAAAATCAAACGAACATGTGGaactacagttgactctcgctaattcgaa ctcgatcGGGGAATGATATgttttcgaattatagaaagtatctTAAGAGG GTTAAAGCTCTTAACGAACGAAATCGAAATGTTGAAAATATCAGGAAATT TTTGGACAAACGAGGAACAACATTCTACGGCATGCAGAGAGAATGGGCAG CAAAAATGGATTCTAGACAATGCTAGTACCATTGTGCGTGTAAATATTTC TTAATTGATATGTAATCCTCTCCTAGGAATCATGATTATCTTTATTTATC ACTTAAGCAAATTTTTGAaggatttgtttttatttttgaaattcacggtt tttagaaaaaagatatAATGTGTAAAAAAAGACGGTAATGTTGCCATGTT TTATATTTTCTGACCAAACACTAAAATATCTACTCTCCTTCAGATTTGAG ATCAATAATGCTATGTGCGGCGATTGTCTGCAGTGATGGCCACCAAAACG ttcactttttcaattttttgacggcAAAAGGATAATCTGTTATAGGATTA GATTATCTAAGGTGGGCACATTTCATCTCAATCAATTTATCTTTTTACAT ACGAATCGCCACACCGAGGTCagcaaacaaaataaaataaggAAAGAAGT TGATCCAGAAATTAGAGATAAGGCGCCGAGGAAATTTCCCCTCCCCCAAA TTATTATCAACTCCCTATTAATAGTCTCTGAAAATATCAAGTGAGCTCAG TGGTGCCCCTGTCCCTTATTCTCGTATTTTTGAAGATCTCCAATCAAACT TAAACGAAATTTCGCACCCGAAAACGTATTCTAGCACTAAGtggtttgtt tttaattttggtgtttttgtctCAAAAAAGTGAACCAGCTAAGTGCTCCA TTCACTGGACTCAAAATGATCAGAGAGTTCAGTCAGAGGTCTAAGCCAAT TTACTATCATATTGTCCCAACTTCCCAGCTGTGTTTTGTCTGTGACATGA TTGGtcttgtttataaaaaaaccaAGAGACGAATAGCCCTctaagaatat tccaatagctTCTTTTTAGAAACCGGAAAATAAATTCGAACGCTTCGTTT CAGGAAGACGCAGAATTATATATGATAACACGAAGAACGTGAAAAGGTCG AGGAGAAAGGAGAATCAGACGGTTTTACCTTACATGTTGCATTGCTTCAA GGATCCTGAGAAAAGCCTAAAATGTCTCCATCTTATGGCTTCACAGTTAA GATACAAGCATTTGAAATCTCTAAAGATGAGGTCTTACGTTTCTTAAGTT GAATAgtcttactaaaataaaaaatgcaacTCGTCAAAGgtagaaatatt ttgaagttttgcgCGAGGTTCGCCCGggtttataaaaatattcttcattC AAAAGATCTCATGATATCTCATTACAGGGGCAGGAGCCACGCcatgaatt tgaaaataagtACAAAACAGTCTAATTTCTTAGCTCGTGCAACGGCGCGG GCAAGAAGACAAGCAGCCTCAACTAAAAGATCTGGCAGGAGTTGTGTGCC ACTCTTAAGTTTACAGTGAGGCTTTCAAGGAAAATTGCACAGAAGAGAAT TAGACAGCCGGCGGTTTGAAAAAAGAAGTCAGAATAAATGCTTGGTCATC GTCCGAAAAGTGACTCTAAATTTGCAAACTTGCACAAAATATTTGAAGGG TAGATATTTTTTGTATAAACAAAACATTGAACGGTGACATTGCATCTATT TTTGAAATGCTTATCTAGCAAATGTAATTACTATAGAGTAATTAATTGAT GCAATACTATTATTAAGCGTATGACAACAGGAAATTTGACTTGGAACTAA ATCATGCATGCCATTACTATGCATATTTAAAATTGCGTATAAATACTGGG TTTGGAATCAAATCCAATCAAATTAAACATTGGAGAAATAACCAAGttaa aaagaaatcaataaaggtaccttaagggaagaaattttcgcgggaagaaa atttcgcggttttcgcggattttgcctaaaaccgcgaaattaagttcccg cgaaattttacaaaatcgtcaatccgcgaaattaaattcccgcgaatttt tcaaaaatcgctgaaccgcgaaattaaattcccgcgaaaaaaaatatttg accaaccgcgaaattaagttcccgcgaaaatttcttcccttaaggtaggc TCATTGAAAAATTGTCTTCGTTTCTATCTGAATGATTTTCTATTCGTGGT ATAATGAGCATTCGTCGCATGAACATTCTGTTGATATTACGAAGATAAAC GACTTTCAAGCAGACTCTTATCATAGCAGAAACCTTAGTTTTGAAACCTA GCAAACTGAAGTAAATGATATATCCTTCTTCTCATTTAGAAAACCAAAGA CAAACATGGCACCAAAATATGTCCACCACTATCTCGATGCATCAGCTCGT GGAGATCCTATCCGAATTGTTTTCTACGCTGCTGGGGTGGAATTTGAAGA GAAATTGTACACGTTTGCTTGCATGCCCAAGATTAAAGCTGATGGTAAGC TGAAATTTAGTGTTCGATTTAAAGCCAGAAgtgctagagaggaatcttca acctttatCAGACAAGAAAATACCTTAGGATTTGCTCCGCTTTTAGACAT ATTGAATCTAGagctttctttgatttcttacAGCATAATATTCAAAAGAA GCcgatggattttactttcaatctggcattCTTTTCCCATTCAAGAATTT CCACTTTTAAGCCCTTCGGGACTAAATGGGCCTACCTTATTCGAAGGATC GCCTTTAACAAAACTAAACCTAGCCTTGCAGATTAGAAGATTGTCTCATC AGAGAGCATAataaaacgtcaattttaaactttctcATTTCAGAAAAGAC CTTTCCCCTTGGACAAGTACCAGCTTTGCAAATCGATGGAGAATCATATG TTCAATCACACGCCATTTTGAGATATTTAGGAAACGAATTCAATTTGTAT GGCATGTGCAACAAACAGAAATTGGTCATCGATGAAATCTTGTACACTTT ATTGGATCTTGAAGACCAATCCTTCCCCACTTTCTTCTTTACACCAAAAT GTCAAAAGGTAAAGAAAACAGACTTCCCTTTAGACTTCAAAAACTGTTGA GTAGATGGAACAAACTGTTCTTTCCTCTTAAATGTTAAATTTCTACATTT AGTCTTCAGAACCTTTTACTGTAGGGGGCGCCTAAATTATCTGCGTTCCA AAGCTTCTATTATTCATCGCTGTTTCTAATTATCTTATACTTCATCAGga tgagaaattgaaaaaattacacGACTATGCTGTCCGAGCTTACAAAATGT TTGAAGGAATATTACAGAAGAATAACAAAGGAAAAGAATACTTCGTTGGA AACAAGGTAAGTGTCCTTCTCATTCAAAAACatacaaattattttcaagt AGCCACTGTTGAAATGTTTGGGCTGTGTAAATCCctgaattacacgtttt tttatatgaacaaactatacgaacataaggctttgatggccaaaatacta agaataagttatgaacattttaaggcttcgtggactcTAAAACGCCCGAT TTCTtcggaaaatggacaaaaatattaaaaaaaacggtGAAATTGCTCTT TCTACTTTCAGCTCTCAATCGCAGACCTGCATTTGGTCATATCCCTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061889TCONS_00061889Clytia hemisphaericatranscript
TCONS_00061890TCONS_00061890Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061889-proteinTCONS_00061889-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:526277..533124 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.47 2.5 1.94 1.58 15.4 9.65 64.92 72.25 324.08 182.78 257.21 80.14 43.75 29.36 39.06 65.76 34.87 42.29 23.17 151.57 48.62 48.99 13.28 13.56 18.79 34.32 8.86 11.68 14.89 10.33