XLOC_038542 (gene) - C. hemisphaerica

Overview
NameXLOC_038542
Unique NameXLOC_038542
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:400472..406116-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038542 ID=XLOC_038542|Name=XLOC_038542|organism=Clytia hemisphaerica|type=gene|length=5645bp|location=Sequence derived from alignment at scaffold_358:400472..406116- (Clytia hemisphaerica)
CACATCGTCTCCATATCACAAAGCAAAGGTTTTGTAAGTTTTATGTCTGA CTTTTATAAAGTCAGCTCATACAGTTTGGGAAAAATGTGTTTTGTCGTTT GTATTTGTTTTGATTTTATTATAATATTAGGGAGGTTGAGGCTCGCGCCT GCGGCAGTAACAAAAGCAGGACTTTTGAAAAAATTCTTCAAGCTTACATA AATCCAGGAAAGAAAAGTTTTCTAGCATAAATTCTTTTTCCAACTTCAAG AGAATTTATTCAGCTTTCTTTTGCAAAAGAAATTATCAAGATATGTCTTT TCGTTCTTTCAAAATTTGAAAATGAGTACTCGCGGGTGCGCTTTTTCAAA CGTCTTGTTCAGGGCACAGGAAATTTAGAACATTAGACCAACTTATGGTA TCGGCCTGAATTTTTTTACATTTTCCCCCATAATAGTTTAGCTTTCGAAA CGTACCACGGCTGACATGAGTGTTCTACTTTTTTCAGGAAGTTAAAATAA GCACTTAAACTGCAAATATTTCCTTCAAATTTACAATATTTTTCAACCAA CGTTATTATTTTAACATGATAAATGTTTTTTCTTTCCAAATCTGAAAAAA TCTTTAATCAAATAGATTCGGGTGGAAAGCGCTAAGGGAAAGTTAATGGT ATGGTGACCCCCGTCTGTAGCTTGAGCTACGGGAAAACCCACTTGCCCCA AACTTCTCTCAAGGATTTTTTTTGTGAAACACTTTTGATTTCAGTGCCGT GAAGAGGTTACAAGATGGTGGGAGGTTTTTGCACAGAAATCTTCAAAAAA TGGAACTTCAAAATGGAATATCTGGAAAACTACTAAAGGTTTTAAAGATG AGTGACCCCTGATTTTTTTTCTGAGGATAAGGGCTNATATATTTGCAAAT GAGTTTGAAATTTCGACTGACCACCCTCTAATAATATCCAGCAGAGGCTA GGCGGTCAGGCTTGATCACAAGTGTTACGGTGTAAGCCGAATCGCGTATT ACGAACAACCTCTAAATTGCCGAGTATAGGAGAAAAAAAATCGAAATTCA AAATGGCGGCCAAACATGGGATAACTGGATAACTATCAAAAATCTTAGTT TTTCAATCAGCTATTGCAGCTCAATAAATCAATGAAATAATTTGAAATGA AAAGTAAACAAACCTTGAACCTTTCATGAATCCAAATAAATAAAAGTATT CATCTAAAGTGAAGATTACATTTCAAAATAAAACGATTTCCAAACNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTCTGCCAAC TAAAAACTTCTCTGCGGGGTCACTGGCAAGGAGTTACGACTTCAGACTTT AGATTCCAATTCTTGTATAGGCTGCAACTACACTGCCAAAATGATCTGTA TTACAAAGACTTCCTAATGGGTCCATAAGTTAAGAAAATGAGATTATCAT CTAGCACGGGGGGTTTTGTTTTTAAAAACAAACTTCAAAATAAAATTGTT AATGAACTTGTTACTTAAAATATAACTTACTTACATAATTCATTTATGAT ATAACACCCCTTTCTTAAATAAATGGCCTCTTAAAGTCTTTTATGTTTGC CGCAAAAAGGAAGAAAAATTTAATTTGACCNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTCTCTCT TTTTCTAGCCATTTCCCGCGTGTTAGTGTAGACACAACTTTAATCCGGGG AAATGAAGCGTTTTCATTGGTCTAAAATCACGGATGGTCACGTGACCAGA ATTCTTATCCAGGGAAATGCCGTGGCCGCAATGTTTTGCTTTAGTGAGAT TGACCATTTTGTTGTTTAGATTTGAGCGGGCAAAATTTCTGTACAAATCA AAGTAGGGCTTCGTTGGAATACCGGTTGAAACACTTGTGTGATAGGATCG ATAGGCGACCCTACCAATTCTCCAGACAATTCAAGGCAAATGTCCGGGGA ATGAAAAAGAATATTTTTATCCCCAGCCCAGACAAACAAACTGCGCAGCC AGATAAGTGAACCTGTGATTGTGAGTTTTAACGCACAAACGATTGTGGTT TACAAATTTACATGAATGAAAGCGGGTAAAATAGGGATGGTGAAATTGAT GCCAATGCAATCACCTGATTGTTTAAGTACGTCGCGCGGACCGCCCGTTC AGTCTGGGGTAAGGGGTCACTCACAAAGCAATTTTGCTTTGGGTTAGAAA AACGTCAATTGACGTTTTAAAAGCTGAGCCACCCACCCACATCCTAAAAC GTCAAACACCTGAAATCCCCAAATATCGATGAAAAACTGCCTTCATCAGC CATCTTGATTTTCACTAACGGCTTGCATAGTTTATATTTGAAAAAAAGAA ACAGAGATCATTTCTAAAAACTTGTTCAATCACAAAATTCCCATAATTAA TTATCTCTGTAGTATATAGTGACAGAAAGAATGGCCATCTGCAAAAATTC AAGGGTCATTTGGGCCGTCAAACAAAGAAAAGACATAAACATTGGGCTGT TTGTTTTGGTTTTCAAAACAGACGAAGCGATCAAACAGAAACATGGCGAG AAGTAATATTTGGCATGGAATGAAAAATCAATGTTTCTGGATTTGAAAAA AAACGTCAACAACCTTTAACCCATCCACCCACTAATGTCAATTGACGTTT TTCTAACCTAAAATCGATTTGTGAACGACCCCTAAGTCTAAAAAAGTAAT GTTAAAATTCCCGGACACGCAACAAGAAAATCCCCGGAGTCCGAGGAATC CGCTGGGTCATATCGATAGCATAGAGTCCCCTGCCCAGTTAGTGACTGAA ATTTTTTTATTCTAATTTTTCACTTACTTTTTACTTTTTTGAAAATCCTT TTCAACCAACGCTTAGACAACTTTTAACATGCTCTTTGTGTTTGTTTTGA TTTTTTATTTGACAGGCTTGCTCTAAAATATATTAGAGAAAGAAATTAAA GAAATTAGAGAAGAAAGTTATGGAGGAACAGAGTTAAAGTAACAAAGAAA TTAGAGAAGAAAGTTACAGAGGAATAGACAGGCTAGCTCTAAAGCTCTAA AACAGCATCTAGTAACATGAAAACCAGAATATGATTTTTCAATGGGGATC AAAACTTTAAAGTGCACTCACAAATATCAATTTGTCAGATCTAACAAAAT TAGTAACGATACTGTCATCATTTGACGATCAAACAAAGGATATTCTATCT CTGTCAAGAACTTTACAAACATTCCGACAACTTTCATCAAAATATTCTAT TGCAGCTAAGTTCTACCATTTTGCGCAGTTTGAGGATTAAGCTGAGTTGA AAAAAGAACTCCCTCATGGGAAAGTTTTTTTCAATCTGTCAATCATTTTC TTAAGTAAAAAGAACGCAAAATGATTCTAACTTTAGGAAAATGCCGCCAA TCACAGTATTCAACTATAATAATTTTCCTTTTATTTTCATTTTTGAACTT TTGATTATCTTTTTGCTGTCTGTTAAAAGCATTATACAAAATTATCTTAC AGCTAAACTTATCAAAAACTGATGGCTGTTGGTACTCAAGCTGGTGGTAG TATGATATATACTTTTAGAGGAAAGTGGATTGCTGGTTTTATTTTGGTTT GTGTTTGTGTTTTGCTATGGGTTCGTCATACTGCTTTACAAAAATCACCT GCTGATGTTGTTGATTTTCAAGATCCGAAAACAACACCATCTGCTTTTTA TGCTAAGATACCTGGTTTCACAAATCAACTTGTTTCTTTTGACCGGATTA GTTCAACGTGTTATCAAAACAAAAGACCAGAAAGCATAGAGGACTTATCC AAATTTGTTGCCCTGTTACATCAAAATAGGCAACATAAATTATGTGGTGA GCAGTATAAGCTTTTCAAAGTGATTTATGCAATAAGGACGAAACAAACAA CAGTTGTTTTGTCTGAAACCTTTTTACCAAAAGTTCAAAAATGGATGAAC GGAAATCAAGAGCTTGTTGAAGCAACCAAGAAACAAACTATCATCTTTGT CGACAATAAATGGTCATTAGAAAGTGTTGTTTTCAATCCAGTCCGTGCCA AAAGACCTGGTGGACAAGGACAAGGTAGTGTTGCAGAATATGTAAACAAT CTTATTGATAAAGCTAAAGAAGGATGTGATTTTTGTTCATACAAAAAGTA TACAGCTGCAGATGATTTTGGCATGTTAGAATCTGAGAGAACGGTTGCAA TATCTAATACGTTCAAGATTGAGAAATACCATGGAATGATTGTCTTTAAA CAGCACGATCCAGTACATTTTGACCAAGATCAGTTTATAGATGCTATGGA TCTAGCAATGAGATGGTTCAAGACTGCGGCTGGTAGAGCAACTGATCATA AATATAGGCATATGTATTGGGATTGTTTACCGAAAGCAAGTGCTAGTCAA GTTCACCCTCACATTCATTTAGCACTTGGGGACCATGCATATTATGCAAA ATGGAATAGGTTACATAAAGCTGCACTCAAGTTCTCTGAGAGTGTACAAA ATTGGAACTACTGGAATGCAATGCTTCAAGTTCATAATGCCCTTGGTTTA AGTGCACAGTAAGCTTATTAATAATTTGTTTTGATATTAAACAGACGTGT TTAGAATAACTGCCATCAAGTTGCAGCAGTGTATTGGTCATTTGCTCATT AAAAGGGTCTATAGTCATGAAAGTAAGCTTCAGGGCTTCTTGTAACTCAA CCGAATATAAACTTTTTTCGTTGATATTTTTTATTGTCTTTATGTAAACA AGACATGTAACTTCAAAGTTTGAAGTTTTTACAATAATTCTTTTTTTAGA AGTTATATACTCCTTTTTAAATTGAGAGAATATTGCCTACTAAACCAAAA TTACCCAGCCCCAAAAATGCAAGATGCTATTAGTATTTTGCCTTTATGTT TGAAGCTCATTATATAATTCCTTCTAATTTCATTACTTTAGCTTCAATTC TGCATCCATCATCTCGTACATCACACCACAAAAAGATTTAGAAGTTGTCA TTTTGGCCAAAAAACCATCCCAAGATTTTTTCAGATTATTTTATTTTGCA GTCCGTACATTTATGGAGGACATGGGTCAATTTGCAATCAGCGCTGGCTG TGTCTTCCCAAAACTTGATGCTAGCACAGACAATGGTGCTGAGCTACCAG CAATTTGTCGTTTATTATCCAGAGGAGCTGCTGACTTACCAAGAAGTGAT GTCAGCTCTTTTGATTTATTTGGTACAGCTAATGTTAATAAGGATCCATT TGTTGTTATTAAGAAAGTCAAGACCGCTTTGGAAAGGTTAAAGACTTCTA AGTTCACATATCAACCCAAGGATATGGAATAGGTGTTTTTTTTATGTAAT TTTTGTATCAGTTTATTGTAGGTATTAGTTTTGTATATTTTTGGTGGAAT AATTACATGATTAAGATCAGTTCATTCATAATTGTTTTTTATCTTTTACA TAGTTTATTCATAATGTTATAGTAACTTGGTTTAATGTTGGCTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061438TCONS_00061438Clytia hemisphaericatranscript
TCONS_00061437TCONS_00061437Clytia hemisphaericatranscript
TCONS_00061436TCONS_00061436Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061436-proteinTCONS_00061436-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:400472..406116 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.01 26.69 35.27 43.49 24.6 18.24 25.16 25.46 26.78 27.27 29.01 16.43 13.92 12.83 13.95 13.15 22.17 19.72 10.59 16.18 16 15.82 18.68 20.47 22.22 24.55 9.36 5.03 13.95 12.61