XLOC_038447 (gene) - C. hemisphaerica

Overview
NameXLOC_038447
Unique NameXLOC_038447
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_355:69365..73200+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038447 ID=XLOC_038447|Name=XLOC_038447|organism=Clytia hemisphaerica|type=gene|length=3836bp|location=Sequence derived from alignment at scaffold_355:69365..73200+ (Clytia hemisphaerica)
TTCATAAGTTTGATTTCAGGTCgtaaaaaaataagattaatTAAAAATGG CTCTTTCAGGGCGATTGTTAGCCCGTAGTTTCAAACTTGTGAAATCATCA TGCGCAATTGGAAACGCTTCTAAAGGtatatcatttttattttgCATGTT GCCTAGTAAAGAGATTAAAATCCAATGAATTGTCACCAGCAAGAATAGCT GTAAAACTTGAAATGTAACCAACATCCCACAATATTGACCTCTTGAATGA TTTCTTGAATTGACATGCTATACATGTTTTAGTATACATCAGTAAACCTT TTTGAAAAGAGTTTAAAAATAACTCTCATAATATGTAATTTGTATAAAAC TGTTAAATTGTTTATGTTGCCTTAAAAACTTTATTGAAACCAAACAGCTC TTGGTACTTTCATTATATcatgaaaaatataatatatttatCCAAACTGC CATAATTATCTTGAATTCTTGAAATAATAACATAcgttttgaattgtttt cagACATGACAAGACGGGCCTTAGGTGTTTCCATTCTTCCAAAAATTCAA CCACTTCGTCTATCAAGTACTGCAGTTTCAACACAAGGTTTTGTAAAACA TTTATTtccttattcaatttttatacaTTATTCTTCTTTTGAAGAAACAA TGGCTAAGTGATAAAATGATTGCATTTCAGCTTCAAACTAATGGGTGATT TTGTTTCTACCTATCTTAGAAACATTAAGTTTTGATGAAAACTGATTGTT TTAAATCTTCCCAAACTGATATAGTCGTTTTCAGCAGAACGTCATcttat tgatttgtcttttacaacacaTCAGTTAcagagtaatttgttattcaata gaccgtCGTCAGTTGTCTCCTAAACAACTATTATGAAATGCGGCTCTTTC CAAATTTTACTTCATTCATAGACGATCCAACGAAGACCAAATTGCTCGAG TTCGGACAATTCGTTGCTAATTCAATGCCAAAGTATGTGCAAACGTCTCA GGTAAGAAATTGTAATCATTACAATGAGATTTCGCAACAAGCCATTGCAT TCTGATTCATTAGTGCTTTTGAAAGGTATGATTACATAATGATTATCATA TACATCAATATTAAACATGTTATAAAACCATAAGATGTGCAACCAAAAAT CAATGGAACTTAACACATACTTTTAAAAACGTTATGGAAAATATATCATC TTATGCTTCATATTTTGGATCAATTACAAAACGTTGTAGGGTGACAAACA AAAACTCCTTTCGAAAAAGGGAAACTTATATcctaattaattaaaatttc gaaattttgaatttagctcTACCTTGTTACAGAGCACTTTGTCACCACAA GTTACTAATGTTGTTGAACCTAAATAATTATTGAACTTAAACACAATTCG CTCTATTTCAACAGGTAACAGAAGGAAATGAGTTAGAGATTTTGATCTGT CCAGAGGGTATCATTCCTACATTGACATTTCTACGTGACCACACCAATGC ACAGTTCAAATTACTTATGGACCTGACCGCTGTGGACTGGCCATCAAAAC CATTCCGATTTGAGGTAcctattttttcgttttttaaacGCATTTTTAGT TCCAACagtcaggccatattttagaaaggtaGGGCAGCATCTGTTGATgt ccaaaaagggcactttttcttgtgtttttccaCTGAAAAGACTGTTTTTA CCAACATTTTAGTGATTTCAGAAACAGAAGGGGACATCGTCTGGTAGCCG GGcgctaaaagggcatgaaaaattgTCTGACAGTGCTATTTGTTTAAAAC TTAGTGTAAGTTTGACCCAAGTAAATGATTTCCATTGCTTTTTGCAGGAT CAGCAACAGATtaatataatatgtctatgtagATTAGATTTACCCTAACA TTAACAACCAGAAACCATAatgtttttcctatttttcagaTTGTGTATAA CCTTTTATCAATCCGTTACAATCAAAGATGTCGCGTAAAAACATACACTG ATGAACTTACACCCATTGATTCCGTTTCCCATCTCTTTGAATCTGCCAAC TGGGCTGAACGAGAGGTAAGAATAAAGATCTCTAAATTTCTGACTTGAAT GTACGTCTCTATGGCAACTTTCACTCAGTTGGTTGAAGCCTATCTCTGTC TTGAAGTTACAATAGAAGtgattggactttttcaaaaaatggtagcAAGA GTCGTGGAAACATCTCTCTGGTTTTATTTTAAGAATACACACAGTATTCC ATTCTCTAGTCTTCTTTTCTAGAGTTTGATTAAACACGTCAAAATCTTTT TATCGTAACCCCAAATACTTCCTGGGAACGATGAAAGAATTTGACGTGTT ACCCAGTGACGTGttacagactctaaaacaccgatttcttaggaaaatgg acaaaactgATCAAAAAATGGTGCAAATacgaacatgttaagaacatggc ttcaaaaattttggatgttctaataaaaaaaagtgcactactacttctat tgaaatttcaacattttcaactgatccaattctttttgtttttacagGTC TGGGATATGTATGGTGTATTCTTCTCTAACCATCCCGACTTGAGAAGAAT CTTAACTGATTATGGCTTTGAAGGACATCcattcagaaaagatttcccaC TAGCTGGCTTTTATGAGGTACTCTTTTGTCCTTTACCGTAGCTTTGGATG GTTTAATAAGCATTTATAAACTCTGCTAATAGTTTTTAACAGTAGCAGAC ACTACTTTTGCATTGTGAATATTTAGAGAATgtgtaaatctttctttgca TTTTGTACCccaacttggtctaatgtcgacatccctcatccaattccgac accctttctTCAGAGCTTCgaaaataatagaaaggtcgaaacgtctctaa agaaggatgtcggaATTAGTTgggggatgtcgacattagaccaacttatg gtattCTGAGAAATCTTGTGACTgacatgacgtaatgtttttcccaaaaa agaccaGGTGTTTATcactaattttgaattaaaacaaTACAACTGGGGGT AAATGCCCGGGCAATTTTGTATTATGAATAAAGTTTTCTAAATAATGCAC CGTTCAACGCGTTTAGTAATACCACTTTCGGCTCTACACCAGAGCCAATG TTACCATATCATTCATTAGAACGGAAGTACATGTTTTCCGTAAATACCAT GAAAACATAATATGCTCATACCCTGCGTGccttaggctgcacgcatcccc tctgacacgatttgatataggggatgcgtatcttCTGGCACTTTAGTATA CATTTTTTATCGAATTAGATTTGGGAAATGTATGGTGTATTCTTCTCCAA TCATTCCGACTTgagaagtttaaaaaaaaattttatcgaattagattttt attttaaagggTTACATTAGTTTATTATATTTCTATCCATTATAATTTAG GTTCGGTATGATGACGAGTTGAAACGTGTCATTCAAGAACCCGTGGAGTT TGCTCAAGAATTCCGAAAATTCGATCTCCAATCACCATGGGAACAATTCC CAAACCACAGAAAAGTCCGGCCAgaaattgaggctgaaattaAAGCGAAC GAGAAAAAACCAGAAGAAGAAAGCGAGaaataatgatgatgatgaaaaaa tttcttttcgttttttttgtaacaaaaaaacatgtaaatacaaatttgaa atttagaaaaacttttttgttttgatatttttacttGTTGTAGTAGGCCT TATGTTTGTGTGTTGTcaacacccccttctcgcagTAGGCCTAATGTTTG TTTGTTGTCAACTCTACTCCTTCTAACAGACGCGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061277TCONS_00061277Clytia hemisphaericatranscript
TCONS_00061278TCONS_00061278Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061277-proteinTCONS_00061277-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_355supercontigscaffold_355:69365..73200 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NDUFS3NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
395.39 381.54 474.6 489.35 205.31 163.76 163.66 157.44 193.13 165.09 171.44 216.6 155.96 170.6 192.63 192.01 320.51 342.83 141.15 144.12 309.83 322.83 213.94 202.88 238.55 217.6 175.04 157.49 139.62 133.67