XLOC_038348 (gene) - C. hemisphaerica

Overview
NameXLOC_038348
Unique NameXLOC_038348
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:1098588..1106513+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038348 ID=XLOC_038348|Name=XLOC_038348|organism=Clytia hemisphaerica|type=gene|length=7926bp|location=Sequence derived from alignment at scaffold_354:1098588..1106513+ (Clytia hemisphaerica)
GTTTAGATTTTCATGAAATGTGGAAATATTTGTTAACTTTTGGAATTCTG GCAGCCGGTATCGAAAGATTGGAAGGTGCAAAGTATGTCATTCCTATGGG TATAGCTGTTTTAACCGATCTGATCTGACGGAGATAAATTGATAAAGGAG CTAGGTCACTTCGAAAAAATCACCGTTATCATATTATTTGCACGCACAAT TTTTAGCCTGAATCGCAGAattctatagatatacttcctatatatgtcta taaaagaaacttttttcgctgaggatgagcagaagcctacgcAACTTTAG GCTTATGAAtagattaaaaaagattttagccCGAAAATCTTTCTCTCGGG AAAATACCTCTGGAAAATCCACTCTGTCTCTGAGCGGAATCCTCCACCCG GGAACCCCAGAGCATTGTCTTGCATATGATACTTCTTAATCAGCTTTGGT TATTTACAATCCATTAGATCAAAGGTGCTTCGAATCAAACCAACGAATGA AGAGCAAATTGATGTCCTCCTTGATTTGATCGATATATATCACGTAATAT TTTCTTTCCTTCTcagtttaagggctctgaccgtagtcaaaaaattgatt ttggtatttgagcataaaagttatgtttcaggttcctttacacttttaac aaagaattgcctttataaattgctttttgatcaaatccataaaagtaatt aagaatttaattacaaaaatgacgttatgaactttaaaaagacgttaata atatgttgcatcgccCTCTTTTATAAAacgtgctaagttttaatgggtaa ttaacctttttgtttcgaaattttttcaaactgtccgcaaagaattgaac tgttttaaatttttcggaaaatttttctaaattgatgcaTTGAAAGTAAt tgctgtttttctatgaacaattgggataaaaaataggtcaaaaagcactt ttttcaagattttgagacaagtaagcttttaaaaaaattttccgaaaata taattttagttcggtaaaggatacaccatctaccacaaaagttttttcaa aatattttttctttgaccaaactaagctcttcaaagttaaaATACTCTTC GTCGCaatcactatggtcagagcctttAAATCTAAACATTTCCGGTCTTT TAGATTTATTGGTATNtatggtcagagcccttaaatctaAACATTTCTGA TCTTTTATATTTAttggtacccttacagtgcatttaccAAACGTCTCTGA CCCTTACAGCATAGTTTggtttcatatcttattttgctgaagccaccctg aaaatgagcctgagatgcCCTTGAAATAtcgacacaatgtgcaaaacaaa tcaaaatgggcaCAGCTCAAAActaaaaggaaaatatttttactgtcAAA CTTGCAATTTAGTAGTCCCCAAACACACCCCTACAGTGTATCTAGCTAAA AGAAGAACCTTGTATGTAGTGCACCCTATCAAAAATACACTCTTACAATG CATTTCGAGGGTCCCGAAAAACCTAAACTTTAAAGGCGGCACATGCCTTG AATATGAATGCCCACCCCCCCCGGGATTATATCTAGTGAATTTTCAGGCA TAAACCTTTTGATAGCAATATAATATGATAATAAAATCTATCATCAATCT AGCTTGATGTATGGAAATCAACACAATTACCGAAGCCGACTTTCGACATT CTTGTGAAGAATGCAAAAGTTGAGAAAAGCCTCCATGAAGAACATATTCC ATACAATGTGATGGTTCATGATGTTGACAAGTTGATGGAAAATGAGCAAA AGTCAAACCAGAAATTAGCTTTCTCTTCAGGATATGATTATTCAAAGTAT GGAACTTGGGATGAGGTAAGTAAAATAACTGATGACAACAAACTCTTGTC TATGTTCTTAACTCTATACTTTGTTGAACTCTTATGTCTCAAAGTAGCTC CCTATTTTTTTCCCCCAGAAATGAGGTTTCTGAAATTTTAAGTTACATAG TATTCTAAAattacctttttgaaaaaatatgagGGTCCCTCTATGGTGCG GACCTTATTTGAAATCTTGGCCATTATAActtttatgagaaaaataccTA ACACCTAACGATACTTTTTTTATTCCAGATTCTCAGTGAAATCAAGAACT TGGCAAACATTCATAGCAACAAAGCAAGTTTATTCAATGTTGGAAAGACG TTTGAAAAACGAGACCAAATCGGCATCAAGGTACGTTTGAAATGTTTTAA CTTCTATCAATTTCCATGTAAGTTGTCTTTAATTTTTAATCTCTGTCACC GAAAGATTATGTAGTTTTTAACATCACATCTCTACAAAACTGTGGTTTTG GTCAGCAGCCAAAGGATTCAGTGATTAAAATTCGTTTCAGTAAAATACTG AAGGAGTTCTGTACAATGAGTGAAGGTAGAACAGGTCTATCATCATATTT TACCCTGCCTGGCAGTGCTTGGGATTCAAacagtctgtgatcgaaacctc cACACTGccaatcggcagaatgttagtgagacaCATTGATAGACACATCT AGATGGTAAGTGAATGTATATcaagtttatcgttctacatctgcaagtTG AGCTTTACTATAAGCTCATTTGACTTCAATTGGtacttcgattatcagcc ggatTGAGAGAGAATGACAAATGAGTGAAGGTAGAGCGTCTATCACCATA AAGTTCTGTACAACTTGAATATTGAAATCAATATTCCTTTAGATCACAAA TGGCGATGGAAATGATAAACCAGTCATTTGGGTGGATGGCGGAATTCACG CCCGAGAATGGATCTCGCCTGCTTCAGTAATTTATCTCGTCAAGCAGTTA TTGACAAGTGATAGTGATACAATCAAATCAGCTCTATCAAAATatgattt tcatattttgcctGTTTTCAATATCGATGGTTTTGTTTACACACATAAAT CGAAAGAAACCCGTTTGTGGCGCAAGACAAGAACAAAGAGTGGATATAAA TGCATAGGAGTTGATCCAAATCGTAATTGGGGATCCCATTTTGGAGGTAC GCATTTCAATAAGTTTCCTTGTTAATAGTTGGTTATATCATTGCACTTTA AGATTTCAAATAACAAACATACAACGACTGATACCTTCGAGGAACTTCTA AAACTCTATAAACCTTTCTTATTTCGCTAAATTCTGAAATCCTTTACAGT TAACTTCTAGTCAAATTTCAGCCTGTAGGATTTGTTAAGTTacagttttg ttttttaaagttgTTCGCTAGATTCACATTATAGGTAAGTAAAGGTTATT GACCTTTAGATCATTGGAAACTCCAAATTAACGGTAACTGAGTGTGAAAT AATAACATAATTCAAACACGCACGTGAAACACAGATTTATTAGAATttag gaaatttcgagttacggAATAAGTTTTATCAGGTATTGTTAACTGactat aaaacttgttcgagttaaagagacaccACTGTATTTCCATTCACTTTTTC AGGAAAAGGCACAAGCGACGATCCTTGCTCAAATATTTATCATGGAAAAT ACGCTTTCTCTGAAATCTCTGTACAAAATGTTGCAACCTACTTGGCAAAC CTACCACACTTAAAAGCGTACTGGAATGTTCACGCATACAGTAATTTAGT GTTAACACCATGGTCTTACACTACAGAGCTACCAAAAGATTATGAAGAAA TTGTAAGTGTCTTAAATATCTATTGGTCGCGTCGTCCCTCATTCGGACAC CCTGAAATATCCGTTCGTGAAAGTATTGTCGTTTTTATGTAGAATTAGaa ttaaaataaattaataTTTCAGATGGTTCTTTGACTTGAGTATCTTTCCA ACAGAATTTAAAGATAATTGTTCTTTATAATCATTAGACAGTTGAGGAGC TAGGAAAGTTTTCCACTTTTTGGTGTCAGATTATTGGAAAGGTCTGCTTA AGAAATACTAAAAATTTTGTCACACTTTTGTACGAGTGGAAAGACAAAAC TTTGAACCTATAAATAAACAGTTTTCCTCTGATCTAAAATTCTAGAAGCG CGTTGGAGATGTATATGCTAAAGAAGTGGTCAAAAGATATGGCACAAAAT ATACTGTTGGTCCTCCAGGAGAAATTTTATGTAAGTTGACCAAACAAAAG CTAAAAAGAATGGCTACTAGTACTACACTGGTTGGAAATACATGTTTAAA TTAATGTTGAGAGAAACTAAGGTGGGGCGGGATttccttttagaaacttt ttcttcCTCGTCTTCTTCTATCGCATAGTCTACTATAGAATTAATGAATA AAATAACGATTCATCTGAcaactttttctttaaagacCCCGTTGGTGGTG GTAGTATCGATTGGACGTACGAAGCTCTGGGTGTCATTTATTCTTACGCA TTGGAACTTCGTGATAATGGCAAATATGGATTCTTGTTACCGACAGATCA AATTATTCCTTGCGCTGAAGAATTTACTGATGCTCTGATTGCCAGTGTTC TTGCAATGAAATGATAGCAAAtcctttttgagttttattgcACCAATGTC AGTTGAATATTAATCTTCTACCTTCTTTATTCTATTGACTTTAATTCACT GTTAGGACAGAGGATCATTTAGAAGATACACTACAGTTCATTATTAACTG AAATTAAGGACAAAATGTtcgagacaaaggggatttccctgcgaaattCA GGCTcagatacagagggaggctataaccaatggaggagagtgcactttat tatcgtattaccttatatggaaactaattactctccatgaataagcctac ctcctgtatccgaccctgaaATTGTAAACACCATAATTCATCTctaagcg cgttaaactacgGTTGGAAACCAGAGTTTTAAATCTAGATTTCAACATGA GACTTAAggatcaaaaagttcaaaaacgtTCCAATAAAGCTTGGAATAAA GCCTAAAGAAGCCACCAAATCCCTCCAAAGTCCTAAAATAACAGTTCTTG CCggagctttaaattctgaaaaacgttaaaatacactaaaatctcaatat gaTCATGATTGTGATTATGTCTTAAGTGGTCGAATACAGGTGAAGTACGT TGTCCTGATTGGTTTTCTAGTGGTCTCTATTTTCCCGTAAAGACAGCTGT TATACACCAAGAGTATAATTTATATCGCAATGCTCccggtttaaatttca aaacactaTTCAGCATAATAAGGAACGACTTTTAAAGTTTCGTTTGATCC TGTTTGTTTATAAACATTTCAAGACCTAGACCatgtattatatttttttg cacatattttttttagattcattTTTGTGAGCTTTTAGATAAAATATACT GTTTTTGCACTGGTAAAAATTCTGGAAATAGCATAGATACTACTGTGTCG TACTTCATAAATATATCCAATTCCTTGTGTTGATTGTCGGAGTTGATTGT GATGAGGGAACTGGAGAATCTTTCAGAATGTTAAGTGCATGgttttatta tttctttttggcaatttcactttttcattttgatgttttagCGGATACCC GTGAGAAAAATGAAAGTGGTGGTGAGTAAAGTTTGCATACCATTAACACC ATTGGAAACGTTgtgcaatacaccttttcaaccgtagccaccaattgcct cGCGCGCATTTtcttgtccgttttaccaccctaaaaccaccccaatcttt ttttcgcacctatagacaatagaaaaaggtgtaaaaaaagattggatcga gtttagggggattaAATAATAAAGCGACACACGCCTGACCGCGTGACTAC AGTCGGAAAGGTGTTTATGAATTTATTAATAGTGGGCATTATGAGTCGGT AGAATAAGTGTTTTCATCATTAATTTGCCTGGAAATGCACTGAAATATAG ggtgaagaaatttttgtttattttgactcATTTATCTTTTATGGCTGCTT ATTCTTCCGTAAGGTGAGGCCTGTAAAAGTAAAACTTTCGCCAGTAAGGA TCAATACAATAATCTTTCTGAGAATATTGTTAGTACATCTTAAAATTATG CATTATTATTGATCATATTGCAGCCAGCTTTCCCCAataatccaacagat ggtagcttcgcaccattgccttttcaagcaagtgcaaatgccaattgact gaatctgcggttcctctcgtactgagcagaattactattgcaacaTGCTT TAATAAagttgttcttacaaaaagccTATAGAGGTTAACTTTTTCCAACC TAAGGTCAACCCCCCCTCCCCGAAGCCTTGGTAGAGTAACCTATGACAAA TTGTTTATATCATAGTCCTATCATTCTTATGTTTAAGCTTCGGAAAACAA GATGGCTGATGGACAAATGGATTGTGGCAGTCTTGTCAATGATATCAAAT TATTAAAACAGTTAACACAGTCAACCTTCAAAGCAAAAGATATTCAACGT CTTATCATAACATCATGCGGGGAAGATAACTATGATGAATTTGACCGGGA ATTTCCTTTCAATGTTCTGGAAACGATATCCAGGATCAATTTGAATCTTG CCAACAAAAACACATTTGGTAATTCAAGGACCAGTTGGTTAGACTATGTG ACTTTTAGCAAGCAGAAAGCCCAAAATGTTCAAGATACAATCTCAGATTT TCTATTATCCCATAATTTTACCATTCGTTATTTCTGTGATGATAAAACTG ATTTGATCCGGTCCGATTTTAccatgaaaaaattaaaaaacaatgaaacc aAATTGGGAAGTCGGGATGAGTTTGAAATTCAAGACTGGGTATTAACCGG AGATGCAGCATTTACAAAATGGTATCTATGTGTTGATAACATGTGTCCAG CGATCAAACCCTTGAAAAAATATTACCATGAAATTGAgattgattttttg gaaattgcaaaaaaaggaCTTTCGGATTTCAAGATTTTAGCTGGTTCAGA TTTTGACTATAAAATTCCTGGGATAAAAATTGGACTCAAAATTAAGTATC TGAAAGGGAGTTTGATATTTCTGCCAGAGATGTTGTTTGGTTATTTGTAT GAGAGCAAAGCAGTGTTAGCGAATTGGCTCAATATGTTGAAAACTCGAGA ACATACAAAAACGATTTTAGAAACAATTCAGAAACATTTTCCATATTTTA CAGTTTACATACCAGGCTCCGTTAATGCATCCAATTGGAAAATGACACGC CCTCCTAAACGGTTTAAGTGATATAATAAAGATTTGGGAGGATCAGTTGA AAGCTGGCACACCAAACAACGTTGTTTTCGCAATGGGGTCCCCAGTGGAG ATCATAATCACGCAACACGCCAAAATAGAAttcaacacccctgtgtcaca gatccgCTGGACCTCAGCCCCACGGGAAAATTAAGCAAAtatttcgtccc cggtaggaaaatacccttgaatttcaacCCCAATGGGAaatcgactttga tttcatccccactcgaaattccatgtttaaaaattgcactccaaaaccat ccccactgggttttttaaccctggaacaatagaatttctatccccattag gatttcaaaaggaatttttaacATTATAATTCAGCTGTGTACTTGACgga ttaaaagtgacatttttgcAAGGGGTTTGATAACCCTAATGTTGTAACTA TATATTAAATTGAAAGTAGGAATTGTGGATAATATGAAACTGTTTGAAGA CATTTTTTGGGttgaccaatttttttttgaatatttatagTTATAGGAAC ATGACTGCAGTAAGTGGTGGTGTGACCATTGATTGTCACTCATTTCCCAT TCAAAACACGTGAGctgcgtggttttcacacaaacccCTGATTGAATTGA AGATTGCTagaaacttgaaaaaatttacgcacaaaaacaaagaaaagcct agattcaatccatcatTATAATACGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061119TCONS_00061119Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061119-proteinTCONS_00061119-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:1098588..1106513 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CPOcarboxypeptidase O precursor Homo Sapiens
CPB2carboxypeptidase B2 isoform 1 preproprotein Homo Sapiens
CPA3mast cell carboxypeptidase A precursor Homo Sapiens
CPA2carboxypeptidase A2 precursor Homo Sapiens
CPA1carboxypeptidase A1 preproprotein Homo Sapiens
CPA4carboxypeptidase A4 preproprotein Homo Sapiens
CPA6PREDICTED: carboxypeptidase A6 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0.05 0.09 0.08 0.15 0.16 2 2.3 0.86 0.93 1.51 0.89 8.63 8.59 3.85 3.98 3.45 3.89 8.7 8.36 4.94 5.17 3.43 3.64 3.47 3.89 0.5 0.63 4.32 3.71