XLOC_038300 (gene) - C. hemisphaerica

Overview
NameXLOC_038300
Unique NameXLOC_038300
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_352:110402..114371-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038300 ID=XLOC_038300|Name=XLOC_038300|organism=Clytia hemisphaerica|type=gene|length=3970bp|location=Sequence derived from alignment at scaffold_352:110402..114371- (Clytia hemisphaerica)
CTAATTTTCCGGTGAAGGGGTGACAAATAATTTACCAAGTTATTTTTCAG
AAGCAATAGTTTCCTTAAAATTAAAACGCCTTCCCATTCTGAGGGCCGCC
TGCTCTAATTCTTTGATTGAAGCATCGAAACTTGCTGTGGAAGACAGTGC
GTGTATTATATCTTCGTTTAATGATTTTCAAATTCTCTGTTCGTCCAAGC
CAAAGCTGTTCCAAAATATCAAACTGAAATTTTTATATTCTCATTTTATT
ATTATCAAATGAAGTCGATGTGTTTTATTTCAATACTAATAGTTTCACGC
CGTGGTGACAATCGCCAGTTGAAAATAAAATTTAAAAAAACTAGAGTTCG
TTATATTCTCATTATAGATTTTATTCAAAAAATTATTCTTAAAAATCCTG
ATTGAATCAGGTTCAATAATCACAAAAAATAGCCAAAAATTAATACGATA
GACATAAAATTCAAATTAACATTATGGAGAACTGAATCAAAATACGGTCC
TTCAAATTTCTCTCCGTAAAAGAATACAAAGTTCTTGCTGTGTATAAGCT
AAGTCCCTTAGCTCGCCTTTTGATGATTCTAATAGTGATCAGGATTGTAT
CACGTTCATCAGTAAAATAAAAAAGTGATACCAGTGGCTCTGGTTAAAGA
GATTCATGATATTCATGACGTAATGTTTTCTACGGAAATGCCCCCGTTTT
AGCCAGTAGTGGCAAATTTAAACTAGACAAAAAAGTTGTTGCTGTGTATA
AGAATAATATGATATTCGTGAGCAAACTCGAATCTAGTCCCTTAGCTCGC
CTTTTGATGATTATGATAGCGCTCAGGATTGTATCACGTCCATCAGTAAA
ATAAAAAAGTTGTGCAAGTGGCTCTGGGTACGAGATTGGTTCGTAAAAAG
ATTGTTAGATATTTTCTCTACGCCAAGCTAATAATAAAACTGGAATTATT
TCGGCAATTGTTTATCGTCTTGTGTATTGTTAAAGTCTTTTTAATTAGTT
TTTTACGTTGTAGCTCTTCTATAAGCTTTTTCCACTCGCCTTTTTCTACA
TGCACTCTTGTAAAATCGTGATAGGGACAAGATGTGTGTCAGGAGAAAAT
CGTTCTTAACTTTTGGAAGCTTTTCAAGTATTTAGTTCTAATCATTTTGG
GATTTTTGCATATCGTGCATTTGTTTGTGGCGAGATAATTTTCGTAGAGA
TATTATATGATGAATTTTGTAAGTATTTTGTATTTTAGATTCTTCTCTAA
TTTTCTTTTAGATTTTGACTATTTTCTGCATTTAACTTGTATTCTTGTGA
TTTCGTCAATAGTAATTTTGTAGTAAGGTTTTGCTAGTTTTTCCTTTATG
TACTTGTTTCTAAACTAGTTTTGTGTTTACTTTCTAGCTGTAAATATACT
GTCAAACCGTGACCGTTTTATTGTCCAGAATTCGTCTTCACCCAAACAAA
ACAGGAATGTTAATGGTAACAGATGACGACGGAGAATTTCGTTTTCGTNT
TCACCCAAACCAAACAGGAATGTTAATGGTAACAGATGACGACGGAGAAT
TTCGTTTTCGTTTTTGAGTTATTCCGATCGCAGAAATGATGTGTTGTACA
GTGTCTCCATAAATCGCACACGCGAGGGGAAGACAAATTTGTTCGAGTTA
AGGAAAATTCGAATCAAGTAAATTTCGAGCTAAGGAAATTTTGACTAATG
GAATAAGGTTTACACGGTATTGTTAACTGAAGGGACCACACAACACTTGT
TCCAGTTAAGGAGACATTCGAGTTATAGAGACTCCACTATATACTTCAAT
ATACTTCAACTATCGTGCAATAATTCCGTGAATTTTATTCCTGCAAACAT
TACAAAACTGGAAGTGGTAAAACCTCAAGAAGAAGAAAGCCAAAACAAAA
ACACACCCTATTTCCTTTTAGAGTTATTCTTGTTTAAAAAAAGCCGCAAG
CAATACAAAATGTTTTTAGGTTCCTTTTTATTAGGACGAAGTTTTTGTTT
TGTCGTTCTTTACAGTTTTAATGAAACAACAATAGACTTAACCAAAAAGA
AAGGGTGTCGGCCTTATTCAATTGTCTAACACACCCTAAAACCCTATGCT
ANGAAGGGTGTCGGGCTTATTCAATTGTCTAACACACCCTAAAACCCTCT
GCTACACATACAACATGAATTATTCAAAATGCACATTCATCGGAAGAAAC
ACCCCCATGTGTGGAAGTATGGAAATATGATTTCTAGATAAGGAATATAT
TCCGTACCAATAGTTTAAATAATTAGCCTCCGTCTCAGAACGCGGTCAGA
AAATTTTGCGGATAATTTCACAGCGAAAATGCATCCAGTGAAATGTGAGT
AATGTATCGTGATTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGAGAAAACCGTGTGGATAGTATGTCTTGTAGTAACCAAT
GCAGTGTCTGTTTTCAAATTTTGAAAGCTCTATACCTACTGAATTGAAGC
TCTGACTAGCTCTGCTTTTAAAACTTTGAGCCATGTTTATTTCTTTGTTG
CTATTAAAGATAGATTTTTAAATTGTCGTAATGTAAATTTATGGTAAAGT
TTTAGTTTTTGAGTTTAGTTCATCAGTAGTACATACAGTNCAATAATTCC
GTGAATTTTATTCCTGCAAACATTACAAAACTGGAAGTGGTAAAACCTCA
AGAAGAAGAAAGCCAAAACAAAAACACACCCTATTTCCTTTTAGAGTTAT
TCTTGTTTAAAAAAAGCCGCAAGCAATACAAAATGTTTTTAGGTTCCTTT
TTATTAGGACGAAGTTTTTGTTTTGTCGTTCTTTACAGTTTTAATGAAAC
AACAATAGACTTAACCAAAAAGAAAGGGTGTCGGCCTTATTCAATTGTCT
AACACACCCTAAAACCCTATGCTACACATACAACATGAATTATTCAAAAT
GCACATCCATCGGAAGAAACACCCCCATGTGTGGAAGTATGGAAATATGA
TTTCTAGATAAGGAATATTCCGTACCAATAGTTCAAATAATTATCCAGCA
AAACTACTTTAAACTCATTATTTAGTCTAAAAAAAACAGGTAATTACAAC
CATCCACGATCCAGATCTGAAAAACACATTGAGTTTATAGAAAGCTATCC
TTTTTTTTCTTGGTAGCTTTGACTCCAGCTTAACCCAGAGAAAGTACCTT
ATATCTAACCAGTTTTAAGTCAAATAAACCGCATTTCAACAGTTATCACT
GATCCAGGAACGTCGAATTTGCTTGATTATGATGGTCGGTGTTTTCGGCG
CACGTGAAGTTTAAGATATTTATCATCAAACAGACTTAAAACATAACTTT
GACGTTGGATTGGCGTCCTTCAGCCATGAGTGATTCAATTTCTTCGACAG
TCCTGGGAACATTGGTCATCAGTTCACACCCTTCCTCTGTCACCGCTATG
TCGTCTTCGATTCTCACCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061016TCONS_00061016Clytia hemisphaericatranscript
TCONS_00061015TCONS_00061015Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_352supercontigscaffold_352:110402..114371 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34	0.38	0.49	0.91	2.69	1.59	3.27	4.13	2.45	2.5	1.85	2.13	3.39	3.09	1.56	1.61	1.09	1.05	0.92	1.07	1.51	1.52	1.06	1.26	6.5	8.38	1.54	2.01	2.6	1.68