XLOC_038131 (gene) - C. hemisphaerica

Overview
NameXLOC_038131
Unique NameXLOC_038131
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_348:11214..15141+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038131 ID=XLOC_038131|Name=XLOC_038131|organism=Clytia hemisphaerica|type=gene|length=3928bp|location=Sequence derived from alignment at scaffold_348:11214..15141+ (Clytia hemisphaerica)
ATACGGTTGCGTCGGAAGtactaaaatcaggctattcaGAGAAAAACAAG
GAGCAGGGATGATAGTTAAAATAATTTAAGATCGTCAACTTTTACACATT
TTTGGGGCAATTTTCATAAACTAGTGAAAAGGTGGGTCTTTatgatcaaa
aattaaaataataactagattttaaatgaataaaaagaaacaaaacccGA
TTTAATTTGAAACTGTTGAAGTTTCAGTTTTAACTGTTAGCTCATAGTGT
TCGAAGATTTTCGTAAAATGTTCTTTGAGTAATTTCATAGTCCTTCGATT
GACcatataaacaataaaaatcaTTACACCACGAAACGCCCTCAACAAAA
TATACAGTAGCCCGAATACcgaattgaaaatttcttcattttctctcAAA
TGGTCACTTTTAATTTGAATCAGTCCAAATAATTCGGTTATTCCCAAAAC
GAGCATTAATTTGATCCCAATTTTCAGCAAATCGGTATCCTTTTTCGTAT
CTTTNGATTTGAATCAATCCAAATAATTCGGTTATTCCCAAAACGAGCAT
TAATTTGATCCCAATTTTCAGCAAATCGGTATCCTTTTTCGTATCTTTGT
TTAGAGTGCGCTCGACCTCTGATTTTCTTCTACGGATCGATGCCAAAACA
ATACAAAGACAAACAAAGCAAAGCACATAACCAATGATTGCCGGGATGAA
ATAAAATCCAAGTGAAAGATAAAAATCTCCAAACCAACATCGATTTTCga
aatgaaaatcaaatgtGTTCGATTCTTCTAATCCAATGATCGCCAATAAA
ATGattaaagaaatgaaaactgTTATTCCCGATCTTTTACGCAAAATATA
AATGGATTCGTGAAGAGATAATGGTCTTGAAAGTTTCTTGGTAAATTGCA
ACGTGATATCAATTGCTACGATGACGctccaaaacaaaacattcaacATA
GACCAGTAAAAGATCATACCAAACCATTTACAGGTTGTTGTTTGTGTTTC
AATGTAAGAAGTTACGAGAAATAAAATATCACTTGTCATCAGGAAAATCA
CCAAGATCATCACACAGTAGGCACCTCTATTTCGAATGGCTGCAACTTTA
GCAAAAACGACAAGAAAAATGACGTAACATATAAGACTTAGTATTGTCCC
GATGAGTGAAATATAAGATTTGGCATCATCGACAGGCTTTACCCAAGAGT
ATTGTTGGAACTTGTAATCCTCCGACTTGTCAACTCGGCATATCTGGAAT
CCTCTCTCTAAAGGTGTATATTCACCAGCATTGTAGCTTTGAAGGTTTTC
CCGTTCAGAATTCCAAATATTAAGAGAACCATTACTTGAAATGTTATAGT
TTGAGGGATTAATGTTTTTCCGGCCACACGTTGAATACAAATGAAACTGT
TCACAAGAATAGATTTCCTCACGAATTTCACCTTTCTCAAAGGTTATTAT
GATGTTAACAGAAGCGTTTCTCGATTCTTGCAAGCTGGCAATAGCTTGAT
TACAGTCCTGTTCAGGTTTAATGGTAATTTTGTTATATTTGGCACATAAT
TTGAACCGATCGAAAGTTCTGATCACATCGTAACCATACAGATGAGTGAA
AAGATGATTCTTCTGACTGGTGACCACAGCTTTGGTGATGTTTGGATTAG
ATTGTGTTTCCTGAAGAAGCTTTTCCTTCCAGTTTGGATTATTCCTAAAA
TCTGTCGATTGAAGAACGAATAAGTCTTTCGGCAATATCCATTTGAGTTT
CAAGAGATTAAAAAATGCCGGAATACTCGAATTACTATTTTCGTTCATGA
AAACATACAGCGTTAGACGAGGAAGCTGCGTGATACATCTCAATTCTGTA
ACGAAAGCTTGGAATCTGTTTGGAGCACATTTATTTTCTTccaaatttga
ttgaaaaccAGGGTCACAAGTGCACACGTCTTTCGAGTCCTTCCGACGCG
AGCTTCCAGAGGGGCAATTACAATATCCATTATTCTTATGTCCCAATAAA
CAAGTACACGATGAGGGACGCTCAAGAGAATTGATTGTGCCAGCGTTACA
AACACAATTACCATTATTCCAATGACGCCACGGAGGACAATCACATTTCC
CGTCCGGTAAAGTGAAAGTATGTTCCATACAAATACATTTCCCATCCGAT
GTCCAAACTTTGGGAAAGGGGCAATCCAATATTTTACGACGAGTGACATT
GAAACAAGTTCCATCCGGATGAGGAAGCAAGCCTTTTTTGCAAACACATT
CACCATTTCGGTCTCTCTCTCTATCAAAGGGACATTCGCATTTACCATCT
GAAGTAGAGACCATTCCTGGCCTACAAATACATCCGTCTCCTTCTGAATT
TTCAAACTGATCTTCCAAACACCGACAACCCCCATCAGATTGCGGTTCCA
TCCCTTGGTGACAAATACATTCTCCTTGGACAAGACGACGGCCAGGTGCA
CAAACGCAATCATCCCAGTTAATAGGCCACCATCCTTCCTTGCAAACACA
ATCACCATTTCGGTCTCTCTCTCGATGAAAGGGACATTCGCATTTACCAT
CTGAGGTAGAGACCATTCCTGGCCTACAAATACATCCGTCTCCTTCTGAA
TTTACATGATCTACCGAACACCAACAACTCCCATCAGATTGCGGTTCCAT
CCCTTGGTGACAAATGCATTCTCCTTGGACAAGACGACGGTCAGGTGCAC
AAACGCAATCATCCCAGTTAGTAGGCCACCATCCTTCCTTACAAACACAA
TCACCGTTTTCGTTAGTCACAAAATCACATTTAcaaatatcattttcatt
tcCATCGTTTCTTTGAAGTTTAGTACGTTCCTTACAAAAACCACATTTGC
CATCGATTAACGCTTGACCTGTTCCACATAACTTTCGCTCACAATAACGA
TGTAAACCATGGCGTATTTCTTGATTAACACCGCATTCTTTAAAGTCGTT
TAAATCAATTACTCTATCCCAGCTTTGTCCTTGCCCTCCAGGAGTTCCAC
CAGGCGAGCAACTTGTTACATCAACAGAGCTTGGNGGTCTTTCCCCTCCA
GGAGGTCCACCAGGCGAGCAACTTGTTACATCAACAGAGCTTGGTAGGCT
ATTCAAACATTTGGAGCAAAAAGGATTTTTAACGAGTTCGTTTTCTGATA
GTTGAAAGTTTGCAGCAACAAGCCGACATAAGGTGGCATCTAACTGGTTG
CATGTTTTTTTATcacatttgaaaactgaatcCGATTTCACATTGTCTGA
GACCATTGTGTAGCAATCGTTCAATTTCAAAAGTTCAATGGCAGTATACT
TGTAAATTTTGTACGCCGAATAACAAACTACATCAACAAAATCCCTGTCA
TAATTTGAAACATTGTTACAGTAAgcgcaaaacttgtttttatatAGGTA
TTTGTCATTCCCGAGAACTGGCATTTGATCAACTTGCTCATTGGAAGAAC
TGTTTATACAATGTTCAATGTCAATTTCATTTGCACCAGGAAGACATGAA
TCCACCATGATGTAATATTCGAGAATCTCCTCTTCAAACGGGAATAACGG
TAAACAATGTTGCAATTTCGACGATTTAATCACTTTTTGTTGGtaatcat
tgacattttgaGCAATACTTTGATTATTGAATGCGAATTGGTTCCATAGA
TAGTCAATACAACAATCACCAGAGCTTTGGCAACCAGCATTGCATCGGCA
TTCACCTTTCTGTAACCAGCGTTGACATTGGAATCCAGTCCATTGTATTG
CAGAAGAGTTGATTCCACTTGCGTCTAAGAAATCCGATAATGGAAAAGGT
TTTTCATTGGGTGTAAGTGCGATTTCAGTGATATTCCATTTTTGGCAATC
CTCCTGCATCGACACTTCTTGCCAAACCAATAGCATCGAAATGACGATGA
GATACAAGCTCATATTTTTCTATACCTc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060620TCONS_00060620Clytia hemisphaericatranscript
TCONS_00060621TCONS_00060621Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:11214..15141 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12	0.14	0.27	0.27	0.25	0.35	0.29	0.29	0.56	0.41	0.83	0.59	2.4	2.2	1.4	1.45	1.94	1.98	2.38	3.71	2.56	2.57	0.63	1.07	1.11	1.5	0.8	0.75	0.03	0.02