XLOC_038109 (gene) - C. hemisphaerica

Overview
NameXLOC_038109
Unique NameXLOC_038109
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_345:233975..243224+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038109 ID=XLOC_038109|Name=XLOC_038109|organism=Clytia hemisphaerica|type=gene|length=9250bp|location=Sequence derived from alignment at scaffold_345:233975..243224+ (Clytia hemisphaerica)
aactaATACCCAATGTATTTCCACTTTCTaaaccaatttttgaaaaccca aCTTTACTTTGTACCAGTTTTGTtgtcatttatttttcagaaattaaaaa taagcaaaatgccacaaataaaacaagaaaatcAAACAAGAGAAATTGCA TCAGCACATAAGGCTATAACAGATCAAGATCGACAGATAGCTGGATCTGC ATCTTCATgtttcaaagagaaaaaatatgaCCAGTGCTCCCAACATATGA AAAAACTATCAGAGCAAAGACCTCATGATCCAAGAGTCATTGTCAACAAA GCTGTTTTGGATTATTACATCTCCAACTTCAGCAAGACAGACTATTTTAT GAAACAAATGCAAAATGCTAAAAAGCAGGTaattttttgtatttgattAT AATAGTATGTGATTAATTCGATTATATTTTAAAGTATCTTTCCAgatcct ttttttttttgccatgAAACAGAAAAAATATAGTTCACCATTTAAATTAA AAAGCTGATGTTTTATGGATAAAACcgcaaaatttcgttttttttaataa tcttTAAATACATATACATATatcttaaaaatgttttttttcagtttgaa tttgGTAACTCAGGAGATGAGCTGGATGATATCGATCGATGTTATTTCTT TTATAATCAAGCTGTACTACATTTTTATGTgagtttctttctttaaaaaa actcctGGTATGATTCAATTTTGTGTATAGAAATTGACTTTGTCTATTCT TATTATAGTGTATCTatggttgaaaaattttcggttttctttagatttta aaCAACTGTAAACCTTAAAATCACAATAATTTTTGCACACCTTTAATTTC CTGATAGAAAACGTGCAGGAAAATTAAAGTAGATCGAAGTAGATCTAAGC AAACTTCAAGTGGCATACTAAAAGTGAACGAAACTTCGTACCAATGAAAA TGGGATGAGCTTTTGTTTTGTacttttatttctcatttttagcTGAAGCA ATACAAAAGCTCATTGAATCTTCTTGATCGTTTATACAAAGTTATTGAAC CACTAGGTAAGAAAAAAAGGCTTTAAGATGACAGTAAGATGGTTGTTAAT GACCTAACACTTTTAACATTTCTCCTCtaataattcatgaaaaaaaatta ggtgaGAATGTCCTTCCAATCCCAACAAAGGCTGAGATGCGATTTCCATG ATagtgacagtttttttcttctgcCAGTATATAAACAACATGAAAGATCC TTTTGATGAATTCATTCCATCATTTTCAAAGATGTTGTTTATTTTACACC TTTCTTCACAGGGGATCTACTTGCAGCTAAAGTCTGCTTCCTTTTCGttg aagtctgtttattgaatAACCAGGTTAGTAAGTTTACTCCACAACTTATT GTCCTAAAAATAAGCCACGAATACTAAAGTNTGTTGTTTTCTTCTACCAG TATACAAACAACATGAAAGATCCTTTTGATGAATTCATTCCATCATTTTC AAAGATGTTGTTTATTTTACGCCTTTCTTCACAGGGGATGTACTTGCAGC TAAAGTCTGCTTCCTTTTCGttgaagtctgtttattgaatAACCAGGTTA GTAAGTTTACTCCACAACTTATTGTCCTAAAAATAAGCCACGAATACTAA AGTCAGTAATAAATTTGCTCAACTCCTTACAAGTTtcacttacacgtttt tttttaaagaacatccaaaatttttgaagccttcggatgttcttaacttt tagtTTTAACTTAAGCTAagttaagatgttcttaacatgttcttattatt ttgaccattttgtgaatacttttgaccattttcctaagagatgggatgtt tttgagtccacaaaacctaaaaatgttcttaacttgttcttaacattttg gccagcgaagccttatgttcttatatagtttattcttataaaaaaatgtg taatggTCTCTACAATCTTGCACAAAATATTTGAGgcaaaggggagttcc cggcGAAATTtgaaacaccacaaatgatttttaagtaccttaaactacag ttggaaagtagagttttaactctgagttttaacatgagacttaagactta ggaccttatgatcgcaggatttaaaagctcaaatttgctcaaataaggct tggaatatagcttagaagccactaaacccctctaaaatcgaaatattcaa tgaaagaaagtggaagtgctaaaatagcaattctcgcccgaactttaaat tctaaaaaaaggttaaaatacactaaaatctcaatatatttcgaccatga ttgcagTTGTTTATTAAATTCCACTTGCTGTGTAAGATAATGTATATTTT CTTGGCATTTACtcaaaattgtttttacaaTATAAGAAATATTCATTTTA GCATGACCAAGCTTTTGGAATGATTACGTACACCGAATCTGTCATCTTGG CAAAACCTCTGGATAATAATGCCAAAAATGTTGAATTCATGAAAGCCTGT CAAAACAAACTACGACTGGTAATGAACGCAGTGTCGTGTACTCAATGACT TcattttttcatactttttattCCAGCTGTTGAGTCCCACCCATTCCCTC AGCCCATTAacgaaaaaaaagttatttataaaaaagtttaGGTTTGTGAA TTAAACTTATGAAATTCCTGCGGGCTATTCCATCTTTtttaaaggaattt tttaaGGAGTCCATTTCGGTCAAACAAACAGTAATTTAACAGTCTGAcca atgttttaaatttttttgactccAAAAATTAAACGTAACGATCATCTTGA TTGTTCTTTTTCTTTAGTCTAAAGCAAGACTTTATTTGGTTCGAGGATTT TACGCTCAATGCAAGAAGGAACTCGAACTTGCCATAAGTGGTGAACATGA GGTAACTTGTGATATTTCCTtatatcggcgatccaaaaaatatctgcaat ctgtttagttaaaaagagtacaatatatcttgtgtTTTACATGTGCAAAA TAcgaattgacgaaaagatgctGTTGCATTGTAGAAGCAATTGCTACTAA AGTGCTCTGCGCTTTTTATCCAACActgaaagtgcattttttgggtcacc ggtaaaccagttatcagacatttgctcgtgcATATATTTTTCCCAAGAGT TTTTGTTCATTTCACCAAACTCGCGTCTTttattttctcaatatttttct CTATCAATACTTGGTCTGACAATACCATGTCATAGTTCATCGTTTACTTG TGGTGCCTCATTTTTAAGTAACTTTATAACGAATGATCGGGGATCTCAAG GGGCGATTGTTTCAAGATAAGGTAGATGTTTTTCTTTGGGtactttttga aaagttttttttttctttttatggctgcaattaaattcaatttcaaattt ttcagcctACAGAAGTTTTATTCTTGAAGTCGCAAGTTGAATGTCTTCGA TGTAATTACCAAAAGTCCATAAGCATCCTTCACAGCACCAACAAAAACAC ACCCTCAGATCCATACAAACCCTTACAAACGATGTACCAAAACAATTTGG GTTGCATTCATTTCCTGACCAAGAAATATAACCTGGCTGTTTCATATTTT AAGAAAGCTTGCGTTGAAAATGCTGCAATCATGAAGAAACTACAATCCAT CGATAAAAGTAATTTTCAAGTCATTTAAACACCCATATTCAAAGGATAGC GCGCGCATTTTTTTCCAATCAAACTAGATGTCTATTAtcgtcattataaa aacactggtctggaaggcttttgtctctttttattgttaaaagatggagc ttacgtaccaaatTCGATTTATTTTGATCATGTCATATagaaatagacca atcccaagaggagattttggtaacgtgatcaaaaagtatacaaGTCGCAA CTTGCCTTTTGTTTATAAcataagaaaattgaacaaaagctaaaacaata cattgccagaccgggttttttataatgactatggtcaAATCTATAATATG TGCTACAATAATANTCAAGTCGCAACATGGTACCTTCTTTTCatcttatt gaaaattaaaaccttaCCTCAAAGGGAATAGAAACAAACTCTGGTCTGGA ACTTTCGCCTATGTAACGACTTCCCAGACTCTACTAAATCTGTGAACTGT ATACAgatttcatcaattttgtttGGCGTTTCGCTTAATTATAATTTAAT TTAAACTTGAGATTTAATATCGGCTGATAACATAAGGACGTTTAGTAACT CTCTCCACTAGTTTGACAAGGTGCTAAAACACAAAACTGATGATGTTATT GAAACCATTCATTTTGTTCAGATCAACCACTATCAGGTCGTCCTTTACAT ACACTCACCATCAACAAAAGAGCTGAACTATTCTTTAATATGGGGTTATC CTTACTTTATGCCGGTCGACCTTCACAAGCTTTCGAGTGTCTCTTGGAAT CACACAACGTTTACCAATGTAACCCAAGATATTGGCTTCGGTTTGCTGAA TGCTGTATAGCAGTTCATCAAGAGGTTTGTGAATGTAATGATCTACCTTT TGCctaatacacaggttgcaaaatgaAAGTCTGAAgccaaatcacgcttt tactcgaaattttatGGGGCTGTTAcgtgacatttatttctgattggttc gaattgattgacactaataaagttattaGCTGTAaattgtaaagcaagta acatagAAATACTgcactgatataattttgcaactcGTGTATTGAGGGGG TTTaactaaagaatcctgcatttctaaaaatagacaaaaagaacgacaaa tttcataaaaaacgacatatttcgccgtccacaaccccgaccgaaagtga ctgtaccacccctagagattcatttttttttgtttatcacgggaaataac tacatgtggtctaaaagaacgacaaattacgcatgcgtgttacaatgcag gatcctttagaggaacagactgatTATACTGCACCTATCATGAATATGTC cagaatgaaaatatttttacagtagagtctccataattcgaatatTCACG GGGAACATAAAGTTTTTCGAATTATGGGAATTTTAAGTTATTGAGATATT AGTTGGTCTATAAGGCATTGCTAACTGAGGGTACCCGAAAACTTGTTAAG GAGACATTTAAGttaaagaggttcgagttatgaggTCTCCCCTGTATTTT GATGCTTCTGGTTTACTATTCTTGATAAAGCGATTAGCAATCTAAAATCA GAAAGGAGCACATGCGTACATGATCGATTTATTCTTGTGCAAAGCTTAAA ATTTGCCAACCCTAGATGTACAATCGTGTAGGTAGACCAAGTTGTAAACA GCATATACATTACTTCAGTTTCCAGGCTGGTTGGTTAAACCGTTAAATCT GATACATTGTCTGTTAACAGATTATGAACACTATGTCGGTCATTTGACTT ATATCTTTTCTTTACATTTATAGACAATCGAGAAAGAGTTTTCTTGCGTC GATCGTAAAAATATGAACGTCTATGATGCCATGGGGAGTGGTGTTAATCG AAAACTTGTAGTTGCTCCGACCCATTTTGACCAACagtaagactttttag tagttTAACGATGTTTTTAGGTTATCAAAGTTTTGTTGCTTCTTTTACTG TGAAGAGTTTTCATTGGCTTTTACAGCGTTTAAACCATACGGATATCACC TTTTTGTATAATTAATCGATTTCACTGTGTTattaaaaaagacaaatttt acaaaaaagtttATGAAAATACGGCATATTCAGCAGTGGAAAAGTGGTTC TATTCTTTCAGCTCGAAATCAACGCCCTCGACCTCACCAACAAATAATGT ACCGACATTGAGTTTCGGAAGTATGTGTTTATCAAATGCATGTACGCTAC TCCCTTCGGAGTCGGTACTGGAAGAAAATATGACGAAATTTCTTCAAAAC GAAAAGCCAGTTCCCGGTGGTGGTGCTGATGATAAAGAGTATgtaatttt cgttttttagaATTCATttttgaccgtagccgccaattgctgcacgggca tttttttgtccattttaccaccctgaaaccgtcccagtctttttttttcg cacctatagacaatagaaaaaagtgtaaaaaaggattggattgagtttag gggataattaaataataaattggcacgcgcctgaccgcgcgactacggta gaaaaagtgtattcgttttcgttttctttgTTCTACTTATTATAAAAcgt ttcaaaaaaacaaatgcTGAGCTGGAGTCTTGCATGGTACTGTGATATCC ACACACAATAAAATATCATAGTAGAATTATTTTTAATGGGGGAATTTTTA GCAATACCAAATAATATAACGCTGATAGCGTGTCCTATgagtgaatttga aaaatctataCTGTCCAACTTATCGGTAATCCTGTCTCTATTCGTATTTG GCTATTGGCTAAGAAGCATTTTCCTTTGTATTTGATTCTTCAAATTTCAT TCACAGGTCAGTCAAACGTAGTTTCATTGGACGAATTTTTGTCGATGCAC CTCCCGGGCATCCTATCCAAACGAAAGAAATTTATCATTTAAGGTGAGag tctttaaaaaatgaaaatatctgGATTGTCGTACATTATCATTTCTTTAC TTTTCTATCGCTTCAAATTCGTGGACCAAAAATGGATTTCGGACAAATGC TTCAAACTTGCATATACCGTAGCAGTccatgaaaatttttcaacgGGACT CGAAATAACAGTCAGACAATGTCAAAATTGACCAAATGACCAAATTGCTT TTTctccgacccacttgaaattgTTATTTGAATCCATATGCTATAACATT CTGACgtagattttcattaatttgtTAGTTCGCTTATTTAGCTCATTCGT TATGAACATTCTAGAAAGGTTTAGCTTTTATTCTGCTGATGTCTTCAGGT TTTTATTTTCCATTCTCACTTGTAATGCTAACAAAATTCTGTCATTTCAG AGCATCAGTGGTGTGCTGCCAAGCGTACATTTCACTGACCATTGGTGACT ATTACAAATGTGTTGAACATTCAAGATCTCTTCTACGTATGACTCACATC TCGGGCCCTCAGAAGTAAGAAAGGTGCTTTTTACCTTAAGGAGGATAATT TTTGCCAGAATTTTGATGTgtttgttacatgacatttatttctgattggt tcgaatttattgacgcTAATAAATTGATCAgcttgtaaagcaagtaacat ggggataaaatcacgtgaactttttcgagtaatcacatgttttgactgca ttgatataattttgcaacccctGTATTAGATCTCGCCGAAACAAAATTTG CTGTCTCGATGAAAAAAGGCTCCTcgccaaatttagatttttataaGATA TGGCAGATTTCtgaacttcagttgagctaggaTTTGAAAATGTAACTTTA CCCTTATATTAGGCGTACGAGTGGCACAGTCTGAGTTTGAGCTGGTGTGG gcagcacgttcgacagttcaTATGTCCAAGTGAAATTCCTTTAACCAAAT CTTCTCCTAAAAACTTcgtctaaaggccggtctccacttgcgcgcgcttc aatcgcactttttgacttcaatcctttttgtttggaaaaaagattacgtc ataaaaatgttgcgcgtgctcgaaagaaaagttgaacacatttcaacctt tttcaatcgttacgtcagatcgcgccaatggagttgcttcatttttcttt tgaccaatagcgtggaagctttgttcgaaaaagtgcgattgaagcgcgcg taagtggagaccagccttaACGGAGAGTTTTAAAATGTAGAAATTGCGAT TTCTTGTGATGGCTTTACTTTATGTTCAGATTTCTGGGACATTCGTACTT GGCTGAATCGTTGATCAAATTAGACAAGATTGCTGAAGCTATTCGAGAAT TATCGACAGATAATCTGAAAGCTTATCAAACATTTGACCAAGAAACTCTC GAGTTAAACACAGGTCAGTCCTACGATTATTTTGtcgatttttgttttat tattgttttttattattattttgttgtttcgtTGTATCAtttgagaaaat atttcaatttttgaattgcATATATGTCAAAATCCGTGTAAAATATTACA TTCCATTTTTTCGCGTCGTCAAATATAGCTCACTATAGTTTTATTTTGCA TCGACTCTTTGAGATTGCCAAAAAAGATTAATCATCTTCCTTTTTATCTT TAGTCGATACTTTCCCAAAGAGCTTGGGAAGTGCACGCATGGTGATGATG TTGAATTTGGCGAGTGTGTACGCCATACGTGCAGAATACGACAAATGCAA ACAGATTCTGCATCAGGTAAGGTTCTAGTagttcttttatttatttattt ctaagACTGGTAAACCATATACTAGGTAAGGGGCTAGTACACCAATAATC TTTTCAGCTATTCGAGAATggtctttgaaaaaatatgcgTCATTAAAAAC TCAAGTTTGTCAAAATCAAATAATCACAGTACTTACAAAACACGGTTTTC CCATTTCAGTGTTAGCCCTTAATCAAACCAAGCGACCAAGACAAAAAGGT TTCCTGAAAACTTACGCTTTAGCAGTTTTCTTTAGGCAACTGTAATAATA GCTTGTTCTTTCGTTTATTTAGATTGCGCTAGTTGTAGATATGCATTCAC CGATCAAATATCATGCAATATTACTGTCCGCTTATTGTGAACTACAGCTA GGTAAAAAAGCGCcccaatgaaatattttttaaaaggcaTTATCCTTTTT TATACaagtctttttcttctttttttcgaatAAATGTTTTCAGAGCTCAG GCCTGCTTTATTACCGAAATTGCTGTCAACCTTGAATAGTGGGGACTGAA AGTCTAAAATCTGATTACTTTTGCCATTTATTTTTACTTACAGGTAAAAT CACCAGTGCGTTAAGCTTGATAAAAAAACACGAAATCTTTCCACACGGGC GTTTGGTTGATCGTGTAGAAGCGGCCGCGCGGACAGCCAACAACCCAGTC GGCGGACAATACcctcaaaatattttacacAAATTCAACGAAATGACTAT GTCTATGAACCAGCCTTTTGTACCAATGATGCAATGAATGTAAATATACC ATGTTTATTcgaaaattttgtatttcttaATTTGCTTTTTGGCATGATTT CTTATGATGAAAAAATATGCTACGATAAAGTTTATCGACCTCGAacaact
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060588TCONS_00060588Clytia hemisphaericatranscript
TCONS_00060589TCONS_00060589Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060589-proteinTCONS_00060589-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_345supercontigscaffold_345:233975..243224 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CNOT10CCR4-NOT transcription complex subunit 10 isoform 3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
64.09 61.34 28.94 24.34 26.45 21.62 27.41 26.69 25.34 26.8 23.53 22.22 26.34 27.16 42.64 48.98 35.28 51.54 29.77 23.68 34.27 31.67 55.24 52.97 62.71 40.61 24.28 29.04 27.02 31.32