TCONS_00060589-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060589-protein
Unique NameTCONS_00060589-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length747

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060589-protein ID=TCONS_00060589-protein|Name=TCONS_00060589-protein|organism=Clytia hemisphaerica|type=polypeptide|length=747bp
MYFHFLNQFLKTQLYFVPVLLSFIFQKLKISKMPQIKQENQTREIASAHK
AITDQDRQIAGSASSCFKEKKYDQCSQHMKKLSEQRPHDPRVIVNKAVLD
YYISNFSKTDYFMKQMQNAKKQFEFGNSGDELDDIDRCYFFYNQAVLHFY
LKQYKSSLNLLDRLYKVIEPLGDLLAAKVCFLFVEVCLLNNQHDQAFGMI
TYTESVILAKPLDNNAKNVEFMKACQNKLRLSKARLYLVRGFYAQCKKEL
ELAISGEHEPTEVLFLKSQVECLRCNYQKSISILHSTNKNTPSDPYKPLQ
TMYQNNLGCIHFLTKKYNLAVSYFKKACVENAAIMKKLQSIDKNQPLSGR
PLHTLTINKRAELFFNMGLSLLYAGRPSQAFECLLESHNVYQCNPRYWLR
FAECCIAVHQETIEKEFSCVDRKNMNVYDAMGSGVNRKLVVAPTHFDQHS
KSTPSTSPTNNVPTLSFGSMCLSNACTLLPSESVLEENMTKFLQNEKPVP
GGGADDKESVKRSFIGRIFVDAPPGHPIQTKEIYHLRASVVCCQAYISLT
IGDYYKCVEHSRSLLRMTHISGPQKFLGHSYLAESLIKLDKIAEAIRELS
TDNLKAYQTFDQETLELNTVDTFPKSLGSARMVMMLNLASVYAIRAEYDK
CKQILHQIALVVDMHSPIKYHAILLSAYCELQLGKITSALSLIKKHEIFP
HGRLVDRVEAAARTANNPVGGQYPQNILHKFNEMTMSMNQPFVPMMQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038109XLOC_038109Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060589TCONS_00060589Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 138..171
e-value: 200.0
score: 3.6
coord: 301..334
e-value: 3.0
score: 16.8
coord: 361..394
e-value: 54.0
score: 8.5
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 521..716
e-value: 1.5E-4
score: 20.9
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 316..417
e-value: 6.9E-7
score: 28.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 194..315
e-value: 3.1E-6
score: 27.1
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 65..193
e-value: 1.3E-6
score: 27.6
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 140..177
coord: 63..91
coord: 233..328
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 298..407

Blast
[Close]
BLAST of TCONS_00060589-protein vs. Swiss-Prot (Human)
Match: CNO10 (CCR4-NOT transcription complex subunit 10 OS=Homo sapiens GN=CNOT10 PE=1 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 7.254e-127
Identity = 243/707 (34.37%), Postives = 378/707 (53.47%), Query Frame = 0 
Query:   38 QENQTREIASAHKAITDQDRQIAGSASSCFKEKKYDQCSQHMKKLSEQRPHDPRVIVNKAVLDYYISNFSKTDYFMKQMQNAKKQFEFG-NSGDELDDIDRCYFFYNQAVLHFYLKQYKSSLNLLDRLYKVIEPLGDLLAAKVCFLFVEVCLLNNQHDQAFGMITYTESVI---------LAKPLDNN--------AKNVEFMKACQNKLRLSKARLYLVRGFYAQCKKELELAISGEHEPTEVLFLKSQVECLRCNYQKSISILHSTNKNTPSDPYKP---LQTMYQNNLGCIHFLTKKYNLAVSYFKKACVENAAIMKKLQ--SIDKNQPLSGRPLHTLTINKRAELFFNMGLSLLYAGRPSQAFECLLESHNVYQCNPRYWLRFAECCIAVHQETIEKEFSCVDRKNMNVYDAMGSGVNRKLVVAPTHFDQHSKSTPSTSPTNNVPTLSFGSMCLSNACTLLPSE--SVLEENMTKFLQNEKPVPGGGADDKESVKRSFI---GRIFVDAPPGHPIQTKEIYHLRASVVCCQAYISLTIGDYYKCVEHSRSLLRMTHISGPQKFLGHSYLAESLIKLDKIAEAIRELSTDNL-------------KAYQTFDQETLELN---TVDTFPKSLGSARMVMMLNLASVYAIRAEYDKCKQILHQIALVVDMHSPIKYHAILLSAYCELQLGKITSALSLIKKHEIFP 700
            Q  +  E       ITDQ+++++ +A   F    YD C QH+  L +    D ++I+N AV +++ SN + TD   + +   K Q        D LDD++    +YNQAV+ ++L+QY  ++++ ++LY+ IEP  +  A  VCFL V++ +L  Q ++A  ++   E +I           +  +NN        A++   ++A ++K+   K R Y+       CK+E++  ++        LFLKS  E LR NY+K++ +L+S+N        K    L+ M+ NNLGCIHF   K+NL + YFKKA  EN  +  +L   S D  +  SGRP+ TL  NKR EL +N G+ LL+ GRP  AFECL+E+  VY  NPR WLR AECCIA ++ T E+E   +  K   V   +G G +RK+V+A     Q++      S    V ++ F ++CL NA  LLP E     +EN  K   N   + G     + S   S     G  F+ APP  P++ +E+ +L+ S++ C AY++L +GD    + H+  LL+   +SG  KFLGH Y AE+LI LD+I++AI  L+ +N+             +     + E +E +       +P S+ SAR VM+ NL S Y +R+EYDK ++ LHQ A ++     +   AILL+ Y ELQ G    AL +IK++++ P
Sbjct:    9 QGAEKHEGTGQSSGITDQEKELSTNAFQAFTSGNYDACLQHLACLQDINKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMISQGNNNKNGKNETGNNNNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLGCIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGIVQSIVGQGYHRKIVLASQSI-QNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPKQENGAK---NSNQLGGNTESSESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKE-VPPEAILLAVYLELQNGNTQLALQIIKRNQLLP 710
The following BLAST results are available for this feature:
BLAST of TCONS_00060589-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNO107.254e-12734.37CCR4-NOT transcription complex subunit 10 OS=Homo ... [more]
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