XLOC_037986 (gene) - C. hemisphaerica

Overview
NameXLOC_037986
Unique NameXLOC_037986
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_341:162727..166265+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037986 ID=XLOC_037986|Name=XLOC_037986|organism=Clytia hemisphaerica|type=gene|length=3539bp|location=Sequence derived from alignment at scaffold_341:162727..166265+ (Clytia hemisphaerica)
AAACTTTGTTCGTCATTTTCGTGTTCATGGAATTGTTTgctgaaatgaaa
gaaaattgtCGAGTGTAGAAAGATAGATGGTTTTTAGTTTTAAGTTTTGC
TACCAGaagtttgaaaaactttttttataggtaacaaaaagttaattttt
ggtAAGTTCTTTTCTCTCAATTTTACATATATACAGTAAATACATATAAG
CTCAATCAAGTCTGATTTAGAAAACTTGCGAGACTCACCTGATCGTAGTT
TTcgtaatttttaaaaagtgtacCTTAATTGCTAATTACGATGTATGTTT
AAGTTTGATTAGAGTTTTATAataattgcttttaatgatAATCAATTTCC
TCAAGCAGAAAAAGTAGGAAATCATCATCTCGCATACATGTTACATGTTG
TATTAACGTATATCTAACCgtcatcaaaaactttttttcttcttcttctg
agATCGCATTTTCTGGTAACTGTGGCGAGAGTTCTTTTGGTAGTTATCGT
GTTACATGTTTTTGCTGTTTATTTGACATTTAGATTTTAAATGACTATGA
CTTTTACATTACAATGCTCATTTAAGCCTGATAAAAGAAGAGATTAGTAC
TTATTGCGTTTTATgttattttatatataatgattATAATTAACATGTCA
GCGTTATGAAGGGGTTTACCCCTATTTATGACATGGTCGAGCAGTTTGTG
CCAATGTTGGTTGACATAACCTTTCAACTTGTCTTtacatttgtttttgt
tttttctgtttttatttattatttgttatttattttttttattttttgta
acagTTTATTGGTATATCAGTAATGGAAGTAATAACATCAGAAAATGCTT
AGGTATCAGATGAAGGAAATTAACTTGAATAGCATAATTAAACTGGAAAT
GGTTTGTGATTCATAACTTCATCCAAACTTAGATTCTAACAATGTACAAC
AGCTAAAACTATTGTTCTTCACTTTACAGAGCcatgaaaaacaacaaata
aaagatgtgaaaaatattttaaaaattcaaaaatgggGAAGCCAGTATGC
GATCGTCACGAGTATCAATATAAATTTGTTCTAGTGGGTGAATCCGGTGT
TGGGAAGACCCGATTATTTGCGGAACTGACTGGACGTCCGCATGATATCG
GATCACGGTCGACAATCGGTGTGGAATTCGGATCGAAGTTAATCGAGAAG
AAAGCAGTTACTCTCAAAGCTCAGGTATAAAGCGTATTTGTCTTGAacgt
ttataacaaaaaaaatgttaagacATTTTATTTTAAGGAATTTTTTACCA
GATAAATTTGCGAAAGCGAATACCAACATCACATCATTGAATTCTGGAGT
TCCTCATTACTGTCCAATCACTCaactcttctttttcttcttctcatCAG
GTATGGGATACTACTGGTCAAGAGCGTTTCCGTTCCACCATCCGCCCGTA
TTACCGTGGCGTGTCTGGGGCGTTAGTGACTTATAATACAGCTCAGAAAG
AAACATTTGATAATTTAGCCTGGTGGATGGAGGAGTTACGTTCTCATTGC
ACGACTGACATTTTATTCATGCTGGTAGCTCACAAAATTGATCTTAAGCG
GCCGCCAGCCGTAGACCAAGTAGTAGCAAGAGATTTTGCAGACCGGAATA
AGATGGTATACGTGGAAACGTCACTTATTGATTCGTCAGAGTTTGAGAGT
GCGTTTGAGTTGATGGTCCGCAAAATACACAAGAAGCGTATGAGACAATC
GTGTGTAGGTGAAGTGACTTGCATCAAGTGTTTGAGGAATGCAAGGAAAG
TTTCTTCTGATGAAGAAAGTGGGGAAGAAGAGGAAGAACAGCCGAAAGAA
ACCAGCTCTTTTTACGTGTAGAAACCAGGTGGTTCGGTTGTTTCTCATTT
GCCTTGGAAATGGTCCAAGATAAATCATGGAATTCGCTCTTTAAGTTACT
TACCCCTTTACTaagaattttaagattttggacCAATATGAAAACGTCAT
TGGTTCCAAGATTCATTGTGAGTGTGGtgtggaaaaaactttttcagttt
aGTCCAATCAACTTGTTCCCGCTTAACACGAGCATTAGAAATCATGAGTT
ATGGCGTTTATATTGGTAAACGAAAATGTTGGACTCGCGTTAAATCTAAA
TACCttactgaaaattgttattgaAGACAATTACTAAAAACGAAATTAGA
ATTAATCAGCTTAAATTCGTGATAACGAATTGGGATATTTTCATTCGTGA
TAACGAATTAGGATATTTTCATGAACTTCTTGATATCTTCGTGAACTTCT
GGATATTCAGCTTTATGAACAGCCTCCCTTGTTGGCGtttacttttttat
gattttgagctATTTTTGAGAGTTAGGTCATAACTAGGATCAATTAGTTT
TCTTTTATCATGGTTATGACCAATTGACAATATCCGAACTAAAAAATTGA
GCCCTCTATCAGTATTATTGTATGATTGGGGAGGTTCTGGGGCTGGCCAA
TGAAACCTTGTGGTAAAAATTACAACAACCTAATTTGTGTTGACAATCAT
ATATTTTTACAGTTGATTGgatttatttatattatatCTACTTCAATGTG
TCAACTTGTGTCAAGTGAATGCTATAAACGGTGATGAAATACCATCTCTT
TTCCTTATGTAAGTAGCTAGAATTACCAACCTATACTTTATTTAAACGAC
GGGTTGCCATCATCAATTACTGCCTACCTGTGTCATAACGCGAATAGCTT
GAAATGTAAGCGGGTGTCTTTACGTCACTTACTTTATGGCAACATTTATG
CTGGCATAAATGAAACATAATATCATTCCAATGGATTCTTTGATTCGATA
AAGTGTTAAAGTCAGGCTTGAATACAAGTTATATCCAATAAAAGTAGAGC
ATAGTCTTTATGGGATATTGTGTGCACCTATTTACTCTCGAACCAAAAAT
TGTATCTGGTGAAAATTTTGCGCAGGTTTATTGACGGTAAATACTCGGAG
TTGATACCTTTTGTAAGGTCAGGTTTGATACGTTAACTACAATACAACAA
ATCTTCTCTGTTTATCAGAATAATGTAAATACTACTAAttaaatttgaag
aattttccgTTTCATTTCGTACTACTTTAGTATGTAAAGATTTCATTTTA
CGCccaaatttctatttttgttaacatttttgctcaattttttatttatt
tttctttttgtaaattatttcaaatttaactCGATTTATTACCATAGCAA
TGATTACTACATTTTAGGGATAAGGAAATGTAGTGGTAATGATACCAGCA
TATTTCAAGGATAGTTTATTATTATGCCAATGGGCTTGATAATTTAGGCC
ACACAGGgattataagaaaatatttctaCCAACTTTAACCGCACTTATCG
CTTATATTAACCCCTCCGAGAGAAAAGATACAAAGCTTCATTTGCTGAAA
ATGTTATACTTTTGAGGATGCACTAATTCTTCAAATAAATCGATGTTTGG
CTTTTGTGTTTTTTGAGGGACATTTTCTTGCTGTCAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060365TCONS_00060365Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060365-proteinTCONS_00060365-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_341supercontigscaffold_341:162727..166265 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.64	20.87	13.44	11.51	18.14	12.84	15.57	17.81	10.8	14.04	12.21	8.68	16.35	14.63	11.22	10.92	23.22	23.75	13.98	21.11	26.83	29.89	22.73	25.38	22.21	24.85	11.27	10.58	20.7	18.39