XLOC_037945 (gene) - C. hemisphaerica

Overview
NameXLOC_037945
Unique NameXLOC_037945
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_340:68787..75492+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037945 ID=XLOC_037945|Name=XLOC_037945|organism=Clytia hemisphaerica|type=gene|length=6706bp|location=Sequence derived from alignment at scaffold_340:68787..75492+ (Clytia hemisphaerica)
gactaactgaatgaaaagaaaagaattaaTGCACACTGATGAAAATTATG CATTGATATGTCTTTGTtttaatgctggagtttttaattattcaacatga catcctggttagcaaaaggtctataaaGTTACAGTTTAACCAAAGTAATT TGTCAAGAAGCCGAaatatacaagtattacagCAATACAATAAGAAAAAC TTTTGGGATAATCaaagaaactttcaaaacctAGGACTTTGTACAAAATA TGGTCAAAATTCACTCATTCTCCCGAAAAATTCTTTGCCAGATTCAAAAA CagtgagattttttgaaaatgccacAATTGTTCCTAGGAGTCTTTTTGct taaatttttaattctttttacattttatagCTAATAAATTTTCATGACAC AATGTGCTCAATCGTACCACAGCCCATAACGTTTGCAACAGATGGTGTTT TAGAACGTCCTCCACTACCAGGCCTTTATATCAAAGATGTTGGTGATATT TCGTTACCATTATGTGAATCACAAGCCAAAGAAATTATTGAAATGGTTAA GGATAATTCTGACGATCCTTCTGTTGAAGAAAGGTATgatatttttaatg aaataaagaaaaagtttttgctAGCTCTGCGTTTGAGCTGGTCTGAGCTG AATTTGAAAATGCAATGGCAGGTTTCAGTTTACTAGACAAGCAACCTGCA CTCTTGTTTTGTTAATACTGACGTCAGCTTGTAATGTACTGATGTCAGAA TATTATTGGATCAGATGTGTATTGCAGCGTGACATTGAGTTTAACATCCA AACAGGAATGACCATTGGGGTGCAAGCTGACTTCTTTAATATTCAATGAA GACGATGGTTGAAAGATAAGACACccaaactttgaagagatttccttttt tatttgatcgtgcttttaagccagcttcaacataaaaaggacttttagtg cgttcagctacagcttaaccggcttgcgacgccgggtaccggctagtagc TTTATAATGCTTTAAGGACATGAAATCATACAAAAGATGATTACTAGAAC AATTAAGTATATGGTACAAACACAGGAGGAGAGCAACATACAAAGGGATA CTAAAGCATAGGAGAAATAGGAGAAGACAAATTTGATATTGACCTAATTT ACAAATTCATTAAACATTAGtaaatataacaaaataaacTGCTTTATAAA GCATTCACATTGAATGACCAGCCCAGCCAACCATTCACCTCACCCACAAG ATTTTTGGAGATTATCCTGGATAGCCCACCAATAAACTCTTTTGTTCATC TttcttaatttatttttgttgctTGGGTTGGCCAAGGCAGATGATTAATT TTACGTACGCTGGTAAGGAATATTCAAGGTGATGGCAtctgaatgaaaag acattaatTAGGTTCTTAACAAGTATATTTAAATATGTTAGAAAAGCTGG CTATAATAAGCATAATACCCCAGAACTCTAGGGGTCTACTATCTGAATAT GATCAATAGATTTCAGAAATTGATTAGGTAACTTTgtatcattttgataa aaaaaaacttgtgaaaataagaaaatgtgacaaaactcaaaattcacaaa atgttAGCTCAAAAATGCATCCTTGTGAAACTACTTTGTTATTTTAGcct taaatcagttgaaacAATTTctaatcacattttcaaaatcaatGGTACAT CCTCTttctgttcttttaaaattatacctatgaatttctttgtttcCATG GCCGGTAAATCAAAGGAAAGCTGCTTTTTAtggatttataaaagatttga aGGTCCATTTAGGTCATACCTGTGATGTTTTCTCTCACTCCATCTATCTT ATTACCTTCATGCTCAGACATATCTCCAAATGATGTTGAACCATGGACGT TGATTCCACATTTGGGCTTGAAAACCACAATCTTGCATGTTTAGAATTCT TGATGTTTTAACCACTCAGCCGGACTTTCTCCTGTACTCTCGAAGATCTT TAGTCAAAGGTTACTGAATTTGTTTCTTTCTTTAGGAATTCCTGGGAGAT CAAATCAAATCAGCTGGCTTTGGAAAGTGAAAAGTTCGAAATGACCTGGA AGAAAAAGATTATTCAAAAAGTCATTGCCGAATTAGGCTGTAAAGCTTCA GAGGAAGTCACTGTGAGCACTCCAAGAGCTGTTTTGTATGGGAAAGGTGC TTCGATTGACTTGACAAGCGATGATGAGGACAAAGAATCAGTGACACTAA TTGTTCAACTACCATCAGTATTCACTGGAAATAACCTCACTATCCACCAC GATGAGgattcaaaaataataaaatttgatgaaaaatactcaaaattcgA AATCATATATGGAGCATTTTATTCAAACTGTGAATATGAGCTCTCTACTT TGAAATCTGGCTATCGATTGGTTCTTGTCTACAAGCTTACTTGGAATGAT TGTAAAATTCCTCAAAGTCGTATTGATGAAAGCAAAGAGGCTACACAAAA AGTGAAATCTGCATTGTCTCAGGTATCTTTTAATAGTGATATCGATTCTA CAAATCTATTCCACTTGTTCACTTTCATTATATAAAGTTAAACATTTCTC TTCATTGGTTCTTagaaaaacagccttttttgaCTAACCATTTTTTGAtt cgtttttaaataaaataactTTTCTATACTTTTTNGCCTTTTTTGACTaa ctattttttgatttgtttttaaataaaataacttttctatactttttgga cctacctggaggtcctataaattaacctctgtccgttcgtccgtccgtcc gttcgtccgtccgtctgttaccagcttttctcaNCATTTTTTGAttcgtt tttaaataaaataacttttctatactttttctttttaaagctTTACCAGA ATCGAGAGAAGTATTTTGGATGGATGTTTGAAGAAAAGTGGGATCCAGAT ACCATTGAAAGTGGTAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTTTTAAAG CTTTACCAGAATCGAGAGAAGTATTTTGGATGGATGTTTGAAGAAAAGTG GGATCCAGATACCATTGAAAGTGGTAGCAAATCGTTGAAAGGAATTGATT GTGCTACTGCTACATATCTAGAGTGGGCAAATAAAGAATTGCCAGAGGAT GAACAATTCTCATTTTATTTGGTCACTTATGAAAAACGTGTCACAAAGAA AGGATACAACAAATTTGGCCATTACAGCCTTGGTAAGTAATATATGTGGA GTATTCctattttgaaataattctccCCCATATTTTGAAAGTCCAAAAGA TCTTATCCCAGTCTAAAACAGAAAACGTAAAATGTAAAAGcaggaaattt ttaaaacaaaaaaatgaaggaaCTGCTTCgtaatttttgtcattttttgt gACTTCATCAGCTTGCTAGTCTAAAACAGATAACAAAgctattgaaatat tttatttgggagtacagggatttttctaagtaCTTTGAACTGGGACCGTT TTTGTAAACTTAGATTGAGTTTCTAGTATGCCTGAAAGGGAATTTTTATC AGCAAATGTATATTGATAAAGCTGGGGGTTTGGTTGGTTGGTGTTCAGAG GGCGAAGcccccaaaaatattttgaatatgtaGATAATATTAGAGATTTT TGTTTGtaaacaacaaacaagtttCATTTTGCTAGAAAATGTCTTTTATA TTTcggattgagtttcaaaaactcAATCTTAGATTGAGTATTTGGCAGGT ATGAGGACATAAAAAAATGCTTAGAAAAATTCCTGGGAGtaaaaccataa tttttgctttGATCATTACTACTACTTTATGCGACAATCCATACATTTCC ATTGTTCATGAAATTCATCATTCATTATCTGAATTTATTTCTTAAGACAT GCACTATTGAATAAATCataattgtttttaattttagaacACCACCGCAA AGTGTGCGAAGAAATTGATCTTAAAGAAGGAGTTGACATGCAAACAATGA TTAAATATCTTGACTTTAGTGGTTTACCAATTGATATAAAAAATGATTTA CTCCAATGGCAAAAAGGAAAGGGTTGGTCCGGAGTATGGACCAAACCTCG TCGAAAGACAACAATAGATTGGGGGCAAGCTGTAAGCAAAAGGATTGAAG ACCATTGGACTTGTTACACTAGAACTGTTCTTTTAGCTGTCCCAACAAAT CGTCGTTTCGAATATTTCTGTTTGTCTAAAAACCCAACGCAATGTGTCCA ATTTCTGAAGTACAATGTAGATTCGCAgtctgaaaattacaaaaaactgT TGAAGGAATTACTGGAAAAATTTACAGCTGATGATTTTAACTGTGGTAAG AATACACATTACGAGTTGGCTTATTTGTTTGTCAATACTTGGGATCCAGA AATGTCATTTATCTATATTGACAAAATTATGGCTGGGACAATGAAGCGCT TTAAAACGCTCGTGTACGGTGTTCCTCCCGGATGCGAAGAACCAGTTGCC AAAATTATTCAATCAGTACCCTGGGAAAAGTTCAAAGAGACTTATAAACA CATTCTTGAGAATATAGTAGTTAAATGGTATCCAAATGTGATGAAAATTT ATGAGCTAACAGGAATTGTTGGGATCATGGACATGCTCATTGAGCAGagt ttaaaaatgttctcaaaagaTCGGTATGCAATTCAACTCATCAGTGGTTC AGATCCAGCAAATCCATATTTCTGGGAAGAAGTCTTTGAGTTTGTTTGCA ACAATGATGAGCTTTATGAGACGTGGTTTGAAAAGTTTGCTAACCATAAA GATATCACTTCCAGCCTTTCTTTGATGTCACGGTTCTTCAATGAAATGCA TCACAGTGATCGCCCACAATCATCCAAGTCTCGTATTCTGAATCTTTTCA TCGATTGCATCAAACAAAGTGACGATTTGGTGACAAGGGATGATCATACA CCGCAACATTTTGAGTACGACGAAGATGATGACAAAGCCAGTGTTGGTAA ACCTAGACATGGTATATCATTGTTGATTGCTTCTACCATTTATCCTTTGC TTGAGAAATCTGATCCTTACAAAGAAGAGCTAACTTACCTGTGCGACTAT CTCATTTCAAGCAACTATTCTGTTATCATCAGCAgaattttgattggctt aattgAAGAAGGTCAACCAGCAAGCCAAACTAGAGGCTTCAAAATGATTT ATGGCATGTACATGAGTAGACTAATTGAGACAAATTTGAAAGCTTCACAG ATTGAGGAAATAGTCAATATCGCTGAAATTCTGTTGCGTAGTGCAGAATA CAATGGGACAAACAAATCTAATTATGAGGCGATATGTAAATCCTTCAAAG AGCCTCATTTACTGTACAAGTTAGctgtaaatctttttcaatgttCTCGT GTTCTCGCCGACAAAAAGTCAGATTTTAATGATGTGATCAATTATGCTCT CAAGCTGTTCCTTGAATCTTTGGAAACCAAATCTATGAGCTGTATACACC CACTTTCCGAATTTTTGGTTTTCTTGGTTGAGAATGTGACAGAATTTGAA AATNTGAATCTTTGGAAACCAAATCTATGAGCTGTATACACCCACTTTCC GAATTTTTGGTTTTCTTGGTTGAGAATGTGACAGAATTTGAAAATATCCT CACAAAAATGTTGTCAAATGCGAAAATTATTCCCGAAATTAAAAGCTGTT CGTATGATATTGTTTATTCACTTGCTAAGAAGCCACAAAGAACTGGAAAT TTCAAGAAGTTGGTCAGTATTGTTATTTCTGCTATTGCTGATTGGCTTGA CATGGGTGGCTTTCCGAATCAATCTTCTTGGTGTTCATTTACTTACGATA AGATTCGTGAACTCATGAAAATGCTCGCTTCAGATAAGTATTTTACTGAT GTCCAAGTTGTATTTTTGCAGCAATTTCAAGTTATTGGTCaggaaaaact caaaaagtcagtGACTAGCAGAAAAGCTATTTTGGATAAGCTGTTgattg attttcaaaatgatgAATTTCAAACTAATCTTTTGAAAGCTCGCTTGAAA AACCTGGAGTCGTTGAGAGAAGAAGGATGCCCAAAGTTTTCTTGGAAACA ACCGAATGCTGACATAGAAGAATATAACTATCGTATTAGAGAGTTTCTTG GGAGCGATGAAGTTACTTTCATTTATCGAAACTTACACAATATCACAGAA GCAAAAGAATGGATTAAAAGACATGCTGGAGTTCATGAAAATTGCAGTTT TACTGCGATTGCTAGAGAAGTTGATGGGAAGGTCGAAGTGGTGTTGCAAA AGGGTCAAGAGATATatgaaaagacaaagaaagaatattttgatttgatt tctgAGCTTGAAGAGTTAGAAGCAAAGGTGCAAGCTTCATCTTGTGAAAA CACAGTAGCACCATCTAATCTTGATGTTGGTTGTAAAAAACCAAAGAAAG CTCGACTtgcttttaaaagtcaaaaagaagaataattttcatcaacttga tatatttttgtaattttttgtatttttgtactGAGTCTGAAATCTGTTCT tgagttatattttttgagttaATCTCTTTTGTTGGATTTTCAGCAGAACA AGCAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060313TCONS_00060313Clytia hemisphaericatranscript
TCONS_00060314TCONS_00060314Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060313-proteinTCONS_00060313-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_340supercontigscaffold_340:68787..75492 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.93 23.31 18.72 16.05 14.61 11.81 13.37 12.59 5.84 7.17 4.83 6.31 4.98 4.49 4.61 4.68 5.62 6.1 2.96 2.48 9.46 6.66 7.53 8.58 3.99 6.94 3.74 4.08 4.67 4.83