|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060313 ID=TCONS_00060313|Name=TCONS_00060313|organism=Clytia hemisphaerica|type=transcript|length=3971bp gactaactgaatgaaaagaaaagaattaaTGCACACTGATGAAAATTATG CATTGATATGTCTTTGTtttaatgctggagtttttaattattcaacatga catcctggttagcaaaaggtctataaaGTTACAGTTTAACCAAAGTAATT TGTCAAGAAGCCGAaatatacaagtattacagCAATACAATAAGAAAAAC TTTTGGGATAATCaaagaaactttcaaaacctAGGACTTTGTACAAAATA TGGTCAAAATTCACTCATTCTCCCGAAAAATTCTTTGCCAGATTCAAAAA CagtgagattttttgaaaatgccacAATTGTTCCTAGGAGTCTTTTTGct taaatttttaattctttttacattttatagCTAATAAATTTTCATGACAC AATGTGCTCAATCGTACCACAGCCCATAACGTTTGCAACAGATGGTGTTT TAGAACGTCCTCCACTACCAGGCCTTTATATCAAAGATGTTGGTGATATT TCGTTACCATTATGTGAATCACAAGCCAAAGAAATTATTGAAATGGTTAA GGATAATTCTGACGATCCTTCTGTTGAAGAAAGGAATTCCTGGGAGATCA AATCAAATCAGCTGGCTTTGGAAAGTGAAAAGTTCGAAATGACCTGGAAG AAAAAGATTATTCAAAAAGTCATTGCCGAATTAGGCTGTAAAGCTTCAGA GGAAGTCACTGTGAGCACTCCAAGAGCTGTTTTGTATGGGAAAGGTGCTT CGATTGACTTGACAAGCGATGATGAGGACAAAGAATCAGTGACACTAATT GTTCAACTACCATCAGTATTCACTGGAAATAACCTCACTATCCACCACGA TGAGgattcaaaaataataaaatttgatgaaaaatactcaaaattcgAAA TCATATATGGAGCATTTTATTCAAACTGTGAATATGAGCTCTCTACTTTG AAATCTGGCTATCGATTGGTTCTTGTCTACAAGCTTACTTGGAATGATTG TAAAATTCCTCAAAGTCGTATTGATGAAAGCAAAGAGGCTACACAAAAAG TGAAATCTGCATTGTCTCAGCTTTACCAGAATCGAGAGAAGTATTTTGGA TGGATGTTTGAAGAAAAGTGGGATCCAGATACCATTGAAAGTGGTAGCAA ATCGTTGAAAGGAATTGATTGTGCTACTGCTACATATCTAGAGTGGGCAA ATAAAGAATTGCCAGAGGATGAACAATTCTCATTTTATTTGGTCACTTAT GAAAAACGTGTCACAAAGAAAGGATACAACAAATTTGGCCATTACAGCCT TGaacACCACCGCAAAGTGTGCGAAGAAATTGATCTTAAAGAAGGAGTTG ACATGCAAACAATGATTAAATATCTTGACTTTAGTGGTTTACCAATTGAT ATAAAAAATGATTTACTCCAATGGCAAAAAGGAAAGGGTTGGTCCGGAGT ATGGACCAAACCTCGTCGAAAGACAACAATAGATTGGGGGCAAGCTGTAA GCAAAAGGATTGAAGACCATTGGACTTGTTACACTAGAACTGTTCTTTTA GCTGTCCCAACAAATCGTCGTTTCGAATATTTCTGTTTGTCTAAAAACCC AACGCAATGTGTCCAATTTCTGAAGTACAATGTAGATTCGCAgtctgaaa attacaaaaaactgTTGAAGGAATTACTGGAAAAATTTACAGCTGATGAT TTTAACTGTGGTAAGAATACACATTACGAGTTGGCTTATTTGTTTGTCAA TACTTGGGATCCAGAAATGTCATTTATCTATATTGACAAAATTATGGCTG GGACAATGAAGCGCTTTAAAACGCTCGTGTACGGTGTTCCTCCCGGATGC GAAGAACCAGTTGCCAAAATTATTCAATCAGTACCCTGGGAAAAGTTCAA AGAGACTTATAAACACATTCTTGAGAATATAGTAGTTAAATGGTATCCAA ATGTGATGAAAATTTATGAGCTAACAGGAATTGTTGGGATCATGGACATG CTCATTGAGCAGagtttaaaaatgttctcaaaagaTCGGTATGCAATTCA ACTCATCAGTGGTTCAGATCCAGCAAATCCATATTTCTGGGAAGAAGTCT TTGAGTTTGTTTGCAACAATGATGAGCTTTATGAGACGTGGTTTGAAAAG TTTGCTAACCATAAAGATATCACTTCCAGCCTTTCTTTGATGTCACGGTT CTTCAATGAAATGCATCACAGTGATCGCCCACAATCATCCAAGTCTCGTA TTCTGAATCTTTTCATCGATTGCATCAAACAAAGTGACGATTTGGTGACA AGGGATGATCATACACCGCAACATTTTGAGTACGACGAAGATGATGACAA AGCCAGTGTTGGTAAACCTAGACATGGTATATCATTGTTGATTGCTTCTA CCATTTATCCTTTGCTTGAGAAATCTGATCCTTACAAAGAAGAGCTAACT TACCTGTGCGACTATCTCATTTCAAGCAACTATTCTGTTATCATCAGCAg aattttgattggcttaattgAAGAAGGTCAACCAGCAAGCCAAACTAGAG GCTTCAAAATGATTTATGGCATGTACATGAGTAGACTAATTGAGACAAAT TTGAAAGCTTCACAGATTGAGGAAATAGTCAATATCGCTGAAATTCTGTT GCGTAGTGCAGAATACAATGGGACAAACAAATCTAATTATGAGGCGATAT GTAAATCCTTCAAAGAGCCTCATTTACTGTACAAGTTAGctgtaaatctt tttcaatgttCTCGTGTTCTCGCCGACAAAAAGTCAGATTTTAATGATGT GATCAATTATGCTCTCAAGCTGTTCCTTGAATCTTTGGAAACCAAATCTA TGAGCTGTATACACCCACTTTCCGAATTTTTGGTTTTCTTGGTTGAGAAT GTGACAGAATTTGAAAATNTGAATCTTTGGAAACCAAATCTATGAGCTGT ATACACCCACTTTCCGAATTTTTGGTTTTCTTGGTTGAGAATGTGACAGA ATTTGAAAATATCCTCACAAAAATGTTGTCAAATGCGAAAATTATTCCCG AAATTAAAAGCTGTTCGTATGATATTGTTTATTCACTTGCTAAGAAGCCA CAAAGAACTGGAAATTTCAAGAAGTTGGTCAGTATTGTTATTTCTGCTAT TGCTGATTGGCTTGACATGGGTGGCTTTCCGAATCAATCTTCTTGGTGTT CATTTACTTACGATAAGATTCGTGAACTCATGAAAATGCTCGCTTCAGAT AAGTATTTTACTGATGTCCAAGTTGTATTTTTGCAGCAATTTCAAGTTAT TGGTCaggaaaaactcaaaaagtcagtGACTAGCAGAAAAGCTATTTTGG ATAAGCTGTTgattgattttcaaaatgatgAATTTCAAACTAATCTTTTG AAAGCTCGCTTGAAAAACCTGGAGTCGTTGAGAGAAGAAGGATGCCCAAA GTTTTCTTGGAAACAACCGAATGCTGACATAGAAGAATATAACTATCGTA TTAGAGAGTTTCTTGGGAGCGATGAAGTTACTTTCATTTATCGAAACTTA CACAATATCACAGAAGCAAAAGAATGGATTAAAAGACATGCTGGAGTTCA TGAAAATTGCAGTTTTACTGCGATTGCTAGAGAAGTTGATGGGAAGGTCG AAGTGGTGTTGCAAAAGGGTCAAGAGATATatgaaaagacaaagaaagaa tattttgatttgatttctgAGCTTGAAGAGTTAGAAGCAAAGGTGCAAGC TTCATCTTGTGAAAACACAGTAGCACCATCTAATCTTGATGTTGGTTGTA AAAAACCAAAGAAAGCTCGACTtgcttttaaaagtcaaaaagaagaataa ttttcatcaacttgatatatttttgtaattttttgtatttttgtactGAG TCTGAAATCTGTTCTtgagttatattttttgagttaATCTCTTTTGTTGG ATTTTCAGCAGAACAAGCAAG Run BLAST on NCBI protein sequence of TCONS_00060313-protein >TCONS_00060313-protein ID=TCONS_00060313-protein|Name=TCONS_00060313-protein|organism=Clytia hemisphaerica|type=polypeptide|length=847bp
MCSIVPQPITFATDGVLERPPLPGLYIKDVGDISLPLCESQAKEIIEMVK DNSDDPSVEERNSWEIKSNQLALESEKFEMTWKKKIIQKVIAELGCKASE EVTVSTPRAVLYGKGASIDLTSDDEDKESVTLIVQLPSVFTGNNLTIHHD EDSKIIKFDEKYSKFEIIYGAFYSNCEYELSTLKSGYRLVLVYKLTWNDC KIPQSRIDESKEATQKVKSALSQLYQNREKYFGWMFEEKWDPDTIESGSK SLKGIDCATATYLEWANKELPEDEQFSFYLVTYEKRVTKKGYNKFGHYSL EHHRKVCEEIDLKEGVDMQTMIKYLDFSGLPIDIKNDLLQWQKGKGWSGV WTKPRRKTTIDWGQAVSKRIEDHWTCYTRTVLLAVPTNRRFEYFCLSKNP TQCVQFLKYNVDSQSENYKKLLKELLEKFTADDFNCGKNTHYELAYLFVN TWDPEMSFIYIDKIMAGTMKRFKTLVYGVPPGCEEPVAKIIQSVPWEKFK ETYKHILENIVVKWYPNVMKIYELTGIVGIMDMLIEQSLKMFSKDRYAIQ LISGSDPANPYFWEEVFEFVCNNDELYETWFEKFANHKDITSSLSLMSRF FNEMHHSDRPQSSKSRILNLFIDCIKQSDDLVTRDDHTPQHFEYDEDDDK ASVGKPRHGISLLIASTIYPLLEKSDPYKEELTYLCDYLISSNYSVIISR ILIGLIEEGQPASQTRGFKMIYGMYMSRLIETNLKASQIEEIVNIAEILL RSAEYNGTNKSNYEAICKSFKEPHLLYKLAVNLFQCSRVLADKKSDFNDV INYALKLFLESLETKSMSCIHPLSEFLVFLVENVTEFENXNLWKPNL Run BLAST on NCBI transcript from alignment at scaffold_340:68787..75492+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060313 ID=TCONS_00060313|Name=TCONS_00060313|organism=Clytia hemisphaerica|type=transcript|length=6706bp|location=Sequence derived from alignment at scaffold_340:68787..75492+ (Clytia hemisphaerica) gactaactgaatgaaaagaaaagaattaaTGCACACTGATGAAAATTATG
CATTGATATGTCTTTGTtttaatgctggagtttttaattattcaacatga
catcctggttagcaaaaggtctataaaGTTACAGTTTAACCAAAGTAATT
TGTCAAGAAGCCGAaatatacaagtattacagCAATACAATAAGAAAAAC
TTTTGGGATAATCaaagaaactttcaaaacctAGGACTTTGTACAAAATA
TGGTCAAAATTCACTCATTCTCCCGAAAAATTCTTTGCCAGATTCAAAAA
CagtgagattttttgaaaatgccacAATTGTTCCTAGGAGTCTTTTTGct
taaatttttaattctttttacattttatagCTAATAAATTTTCATGACAC
AATGTGCTCAATCGTACCACAGCCCATAACGTTTGCAACAGATGGTGTTT
TAGAACGTCCTCCACTACCAGGCCTTTATATCAAAGATGTTGGTGATATT
TCGTTACCATTATGTGAATCACAAGCCAAAGAAATTATTGAAATGGTTAA
GGATAATTCTGACGATCCTTCTGTTGAAGAAAGGTATgatatttttaatg
aaataaagaaaaagtttttgctAGCTCTGCGTTTGAGCTGGTCTGAGCTG
AATTTGAAAATGCAATGGCAGGTTTCAGTTTACTAGACAAGCAACCTGCA
CTCTTGTTTTGTTAATACTGACGTCAGCTTGTAATGTACTGATGTCAGAA
TATTATTGGATCAGATGTGTATTGCAGCGTGACATTGAGTTTAACATCCA
AACAGGAATGACCATTGGGGTGCAAGCTGACTTCTTTAATATTCAATGAA
GACGATGGTTGAAAGATAAGACACccaaactttgaagagatttccttttt
tatttgatcgtgcttttaagccagcttcaacataaaaaggacttttagtg
cgttcagctacagcttaaccggcttgcgacgccgggtaccggctagtagc
TTTATAATGCTTTAAGGACATGAAATCATACAAAAGATGATTACTAGAAC
AATTAAGTATATGGTACAAACACAGGAGGAGAGCAACATACAAAGGGATA
CTAAAGCATAGGAGAAATAGGAGAAGACAAATTTGATATTGACCTAATTT
ACAAATTCATTAAACATTAGtaaatataacaaaataaacTGCTTTATAAA
GCATTCACATTGAATGACCAGCCCAGCCAACCATTCACCTCACCCACAAG
ATTTTTGGAGATTATCCTGGATAGCCCACCAATAAACTCTTTTGTTCATC
TttcttaatttatttttgttgctTGGGTTGGCCAAGGCAGATGATTAATT
TTACGTACGCTGGTAAGGAATATTCAAGGTGATGGCAtctgaatgaaaag
acattaatTAGGTTCTTAACAAGTATATTTAAATATGTTAGAAAAGCTGG
CTATAATAAGCATAATACCCCAGAACTCTAGGGGTCTACTATCTGAATAT
GATCAATAGATTTCAGAAATTGATTAGGTAACTTTgtatcattttgataa
aaaaaaacttgtgaaaataagaaaatgtgacaaaactcaaaattcacaaa
atgttAGCTCAAAAATGCATCCTTGTGAAACTACTTTGTTATTTTAGcct
taaatcagttgaaacAATTTctaatcacattttcaaaatcaatGGTACAT
CCTCTttctgttcttttaaaattatacctatgaatttctttgtttcCATG
GCCGGTAAATCAAAGGAAAGCTGCTTTTTAtggatttataaaagatttga
aGGTCCATTTAGGTCATACCTGTGATGTTTTCTCTCACTCCATCTATCTT
ATTACCTTCATGCTCAGACATATCTCCAAATGATGTTGAACCATGGACGT
TGATTCCACATTTGGGCTTGAAAACCACAATCTTGCATGTTTAGAATTCT
TGATGTTTTAACCACTCAGCCGGACTTTCTCCTGTACTCTCGAAGATCTT
TAGTCAAAGGTTACTGAATTTGTTTCTTTCTTTAGGAATTCCTGGGAGAT
CAAATCAAATCAGCTGGCTTTGGAAAGTGAAAAGTTCGAAATGACCTGGA
AGAAAAAGATTATTCAAAAAGTCATTGCCGAATTAGGCTGTAAAGCTTCA
GAGGAAGTCACTGTGAGCACTCCAAGAGCTGTTTTGTATGGGAAAGGTGC
TTCGATTGACTTGACAAGCGATGATGAGGACAAAGAATCAGTGACACTAA
TTGTTCAACTACCATCAGTATTCACTGGAAATAACCTCACTATCCACCAC
GATGAGgattcaaaaataataaaatttgatgaaaaatactcaaaattcgA
AATCATATATGGAGCATTTTATTCAAACTGTGAATATGAGCTCTCTACTT
TGAAATCTGGCTATCGATTGGTTCTTGTCTACAAGCTTACTTGGAATGAT
TGTAAAATTCCTCAAAGTCGTATTGATGAAAGCAAAGAGGCTACACAAAA
AGTGAAATCTGCATTGTCTCAGGTATCTTTTAATAGTGATATCGATTCTA
CAAATCTATTCCACTTGTTCACTTTCATTATATAAAGTTAAACATTTCTC
TTCATTGGTTCTTagaaaaacagccttttttgaCTAACCATTTTTTGAtt
cgtttttaaataaaataactTTTCTATACTTTTTNGCCTTTTTTGACTaa
ctattttttgatttgtttttaaataaaataacttttctatactttttgga
cctacctggaggtcctataaattaacctctgtccgttcgtccgtccgtcc
gttcgtccgtccgtctgttaccagcttttctcaNCATTTTTTGAttcgtt
tttaaataaaataacttttctatactttttctttttaaagctTTACCAGA
ATCGAGAGAAGTATTTTGGATGGATGTTTGAAGAAAAGTGGGATCCAGAT
ACCATTGAAAGTGGTAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTTTTAAAG
CTTTACCAGAATCGAGAGAAGTATTTTGGATGGATGTTTGAAGAAAAGTG
GGATCCAGATACCATTGAAAGTGGTAGCAAATCGTTGAAAGGAATTGATT
GTGCTACTGCTACATATCTAGAGTGGGCAAATAAAGAATTGCCAGAGGAT
GAACAATTCTCATTTTATTTGGTCACTTATGAAAAACGTGTCACAAAGAA
AGGATACAACAAATTTGGCCATTACAGCCTTGGTAAGTAATATATGTGGA
GTATTCctattttgaaataattctccCCCATATTTTGAAAGTCCAAAAGA
TCTTATCCCAGTCTAAAACAGAAAACGTAAAATGTAAAAGcaggaaattt
ttaaaacaaaaaaatgaaggaaCTGCTTCgtaatttttgtcattttttgt
gACTTCATCAGCTTGCTAGTCTAAAACAGATAACAAAgctattgaaatat
tttatttgggagtacagggatttttctaagtaCTTTGAACTGGGACCGTT
TTTGTAAACTTAGATTGAGTTTCTAGTATGCCTGAAAGGGAATTTTTATC
AGCAAATGTATATTGATAAAGCTGGGGGTTTGGTTGGTTGGTGTTCAGAG
GGCGAAGcccccaaaaatattttgaatatgtaGATAATATTAGAGATTTT
TGTTTGtaaacaacaaacaagtttCATTTTGCTAGAAAATGTCTTTTATA
TTTcggattgagtttcaaaaactcAATCTTAGATTGAGTATTTGGCAGGT
ATGAGGACATAAAAAAATGCTTAGAAAAATTCCTGGGAGtaaaaccataa
tttttgctttGATCATTACTACTACTTTATGCGACAATCCATACATTTCC
ATTGTTCATGAAATTCATCATTCATTATCTGAATTTATTTCTTAAGACAT
GCACTATTGAATAAATCataattgtttttaattttagaacACCACCGCAA
AGTGTGCGAAGAAATTGATCTTAAAGAAGGAGTTGACATGCAAACAATGA
TTAAATATCTTGACTTTAGTGGTTTACCAATTGATATAAAAAATGATTTA
CTCCAATGGCAAAAAGGAAAGGGTTGGTCCGGAGTATGGACCAAACCTCG
TCGAAAGACAACAATAGATTGGGGGCAAGCTGTAAGCAAAAGGATTGAAG
ACCATTGGACTTGTTACACTAGAACTGTTCTTTTAGCTGTCCCAACAAAT
CGTCGTTTCGAATATTTCTGTTTGTCTAAAAACCCAACGCAATGTGTCCA
ATTTCTGAAGTACAATGTAGATTCGCAgtctgaaaattacaaaaaactgT
TGAAGGAATTACTGGAAAAATTTACAGCTGATGATTTTAACTGTGGTAAG
AATACACATTACGAGTTGGCTTATTTGTTTGTCAATACTTGGGATCCAGA
AATGTCATTTATCTATATTGACAAAATTATGGCTGGGACAATGAAGCGCT
TTAAAACGCTCGTGTACGGTGTTCCTCCCGGATGCGAAGAACCAGTTGCC
AAAATTATTCAATCAGTACCCTGGGAAAAGTTCAAAGAGACTTATAAACA
CATTCTTGAGAATATAGTAGTTAAATGGTATCCAAATGTGATGAAAATTT
ATGAGCTAACAGGAATTGTTGGGATCATGGACATGCTCATTGAGCAGagt
ttaaaaatgttctcaaaagaTCGGTATGCAATTCAACTCATCAGTGGTTC
AGATCCAGCAAATCCATATTTCTGGGAAGAAGTCTTTGAGTTTGTTTGCA
ACAATGATGAGCTTTATGAGACGTGGTTTGAAAAGTTTGCTAACCATAAA
GATATCACTTCCAGCCTTTCTTTGATGTCACGGTTCTTCAATGAAATGCA
TCACAGTGATCGCCCACAATCATCCAAGTCTCGTATTCTGAATCTTTTCA
TCGATTGCATCAAACAAAGTGACGATTTGGTGACAAGGGATGATCATACA
CCGCAACATTTTGAGTACGACGAAGATGATGACAAAGCCAGTGTTGGTAA
ACCTAGACATGGTATATCATTGTTGATTGCTTCTACCATTTATCCTTTGC
TTGAGAAATCTGATCCTTACAAAGAAGAGCTAACTTACCTGTGCGACTAT
CTCATTTCAAGCAACTATTCTGTTATCATCAGCAgaattttgattggctt
aattgAAGAAGGTCAACCAGCAAGCCAAACTAGAGGCTTCAAAATGATTT
ATGGCATGTACATGAGTAGACTAATTGAGACAAATTTGAAAGCTTCACAG
ATTGAGGAAATAGTCAATATCGCTGAAATTCTGTTGCGTAGTGCAGAATA
CAATGGGACAAACAAATCTAATTATGAGGCGATATGTAAATCCTTCAAAG
AGCCTCATTTACTGTACAAGTTAGctgtaaatctttttcaatgttCTCGT
GTTCTCGCCGACAAAAAGTCAGATTTTAATGATGTGATCAATTATGCTCT
CAAGCTGTTCCTTGAATCTTTGGAAACCAAATCTATGAGCTGTATACACC
CACTTTCCGAATTTTTGGTTTTCTTGGTTGAGAATGTGACAGAATTTGAA
AATNTGAATCTTTGGAAACCAAATCTATGAGCTGTATACACCCACTTTCC
GAATTTTTGGTTTTCTTGGTTGAGAATGTGACAGAATTTGAAAATATCCT
CACAAAAATGTTGTCAAATGCGAAAATTATTCCCGAAATTAAAAGCTGTT
CGTATGATATTGTTTATTCACTTGCTAAGAAGCCACAAAGAACTGGAAAT
TTCAAGAAGTTGGTCAGTATTGTTATTTCTGCTATTGCTGATTGGCTTGA
CATGGGTGGCTTTCCGAATCAATCTTCTTGGTGTTCATTTACTTACGATA
AGATTCGTGAACTCATGAAAATGCTCGCTTCAGATAAGTATTTTACTGAT
GTCCAAGTTGTATTTTTGCAGCAATTTCAAGTTATTGGTCaggaaaaact
caaaaagtcagtGACTAGCAGAAAAGCTATTTTGGATAAGCTGTTgattg
attttcaaaatgatgAATTTCAAACTAATCTTTTGAAAGCTCGCTTGAAA
AACCTGGAGTCGTTGAGAGAAGAAGGATGCCCAAAGTTTTCTTGGAAACA
ACCGAATGCTGACATAGAAGAATATAACTATCGTATTAGAGAGTTTCTTG
GGAGCGATGAAGTTACTTTCATTTATCGAAACTTACACAATATCACAGAA
GCAAAAGAATGGATTAAAAGACATGCTGGAGTTCATGAAAATTGCAGTTT
TACTGCGATTGCTAGAGAAGTTGATGGGAAGGTCGAAGTGGTGTTGCAAA
AGGGTCAAGAGATATatgaaaagacaaagaaagaatattttgatttgatt
tctgAGCTTGAAGAGTTAGAAGCAAAGGTGCAAGCTTCATCTTGTGAAAA
CACAGTAGCACCATCTAATCTTGATGTTGGTTGTAAAAAACCAAAGAAAG
CTCGACTtgcttttaaaagtcaaaaagaagaataattttcatcaacttga
tatatttttgtaattttttgtatttttgtactGAGTCTGAAATCTGTTCT
tgagttatattttttgagttaATCTCTTTTGTTGGATTTTCAGCAGAACA
AGCAAG Coding sequence (CDS) from alignment at scaffold_340:68787..75492+ >TCONS_00060313 ID=TCONS_00060313|Name=TCONS_00060313|organism=Clytia hemisphaerica|type=CDS|length=10176bp|location=Sequence derived from alignment at scaffold_340:68787..75492+ (Clytia hemisphaerica) ATGTGCTCAATCGTACCACAGCCCATAACGTTTGCAACAGATGGTGTTTT AGAACGTCCTCCACTACCAGGCCTTTATATCAAAGATGTTGGTGATATTT CGTTACCATTATGTGAATCACAAGCCAAAGAAATTATTGAAATGGTTAAG GATAATTCTGACGATCCTTCTGTTGAAGAAAGGAATTCCTGGGAGATCAA ATCAAATCAGCTGGCTTTGGAAAGTGAAAAGTTCGAAATGACCTGGAAGA AAAAGATTATTCAAAAAGTCATTGCCGAATTAGGCTGTAAAGCTTCAGAG GAAGTCACTGTGAGCACTCCAAGAGCTGTTTTGTATGGGAAAGGTGCTTC GATTGACTTGACAAGCGATGATGAGGACAAAGAATCAGTGACACTAATTG TTCAACTACCATCAGTATTCACTGGAAATAACCTCACTATCCACCACGAT GAGgattcaaaaataataaaatttgatgaaaaatactcaaaattcgAAAT CATATATGGAGCATTTTATTCAAACTGTGAATATGAGCTCTCTACTTTGA AATCTGGCTATCGATTGGTTCTTGTCTACAAGCTTACTTGGAATGATTGT AAAATTCCTCAAAGTCGTATTGATGAAAGCAAAGAGGCTACACAAAAAGT GAAATCTGCATTGTCTCAGCTTTACCAGAATCGAGAGAAGTATTTTGGAT GGATGTTTGAAGAAAAGTGGGATCCAGATACCATTGAAAGTGGTAGCAAA TCGTTGAAAGGAATTGATTGTGCTACTGCTACATATCTAGAGTGGGCAAA TAAAGAATTGCCAGAGGATGAACAATTCTCATTTTATTTGGTCACTTATG AAAAACGTGTCACAAAGAAAGGATACAACAAATTTGGCCATTACAGCCTT GaacACCACCGCAAAGTGTGCGAAGAAATTGATCTTAAAGAAGGAGTTGA CATGCAAACAATGATTAAATATCTTGACTTTAGTGGTTTACCAATTGATA TAAAAAATGATTTACTCCAATGGCAAAAAGGAAAGGGTTGGTCCGGAGTA TGGACCAAACCTCGTCGAAAGACAACAATAGATTGGGGGCAAGCTGTAAG CAAAAGGATTGAAGACCATTGGACTTGTTACACTAGAACTGTTCTTTTAG CTGTCCCAACAAATCGTCGTTTCGAATATTTCTGTTTGTCTAAAAACCCA ACGCAATGTGTCCAATTTCTGAAGTACAATGTAGATTCGCAgtctgaaaa ttacaaaaaactgTTGAAGGAATTACTGGAAAAATTTACAGCTGATGATT TTAACTGTGGTAAGAATACACATTACGAGTTGGCTTATTTGTTTGTCAAT ACTTGGGATCCAGAAATGTCATTTATCTATATTGACAAAATTATGGCTGG GACAATGAAGCGCTTTAAAACGCTCGTGTACGGTGTTCCTCCCGGATGCG AAGAACCAGTTGCCAAAATTATTCAATCAGTACCCTGGGAAAAGTTCAAA GAGACTTATAAACACATTCTTGAGAATATAGTAGTTAAATGGTATCCAAA TGTGATGAAAATTTATGAGCTAACAGGAATTGTTGGGATCATGGACATGC TCATTGAGCAGagtttaaaaatgttctcaaaagaTCGGTATGCAATTCAA CTCATCAGTGGTTCAGATCCAGCAAATCCATATTTCTGGGAAGAAGTCTT TGAGTTTGTTTGCAACAATGATGAGCTTTATGAGACGTGGTTTGAAAAGT TTGCTAACCATAAAGATATCACTTCCAGCCTTTCTTTGATGTCACGGTTC TTCAATGAAATGCATCACAGTGATCGCCCACAATCATCCAAGTCTCGTAT TCTGAATCTTTTCATCGATTGCATCAAACAAAGTGACGATTTGGTGACAA GGGATGATCATACACCGCAACATTTTGAGTACGACGAAGATGATGACAAA GCCAGTGTTGGTAAACCTAGACATGGTATATCATTGTTGATTGCTTCTAC CATTTATCCTTTGCTTGAGAAATCTGATCCTTACAAAGAAGAGCTAACTT ACCTGTGCGACTATCTCATTTCAAGCAACTATTCTGTTATCATCAGCAga attttgattggcttaattgAAGAAGGTCAACCAGCAAGCCAAACTAGAGG CTTCAAAATGATTTATGGCATGTACATGAGTAGACTAATTGAGACAAATT TGAAAGCTTCACAGATTGAGGAAATAGTCAATATCGCTGAAATTCTGTTG CGTAGTGCAGAATACAATGGGACAAACAAATCTAATTATGAGGCGATATG TAAATCCTTCAAAGAGCCTCATTTACTGTACAAGTTAGctgtaaatcttt ttcaatgttCTCGTGTTCTCGCCGACAAAAAGTCAGATTTTAATGATGTG ATCAATTATGCTCTCAAGCTGTTCCTTGAATCTTTGGAAACCAAATCTAT GAGCTGTATACACCCACTTTCCGAATTTTTGGTTTTCTTGGTTGAGAATG TGACAGAATTTGAAAATNTGAATCTTTGGAAACCAAATCTATGAATGTGC TCAATCGTACCACAGCCCATAACGTTTGCAACAGATGGTGTTTTAGAACG TCCTCCACTACCAGGCCTTTATATCAAAGATGTTGGTGATATTTCGTTAC CATTATGTGAATCACAAGCCAAAGAAATTATTGAAATGGTTAAGGATAAT TCTGACGATCCTTCTGTTGAAGAAAGGAATTCCTGGGAGATCAAATCAAA TCAGCTGGCTTTGGAAAGTGAAAAGTTCGAAATGACCTGGAAGAAAAAGA TTATTCAAAAAGTCATTGCCGAATTAGGCTGTAAAGCTTCAGAGGAAGTC ACTGTGAGCACTCCAAGAGCTGTTTTGTATGGGAAAGGTGCTTCGATTGA CTTGACAAGCGATGATGAGGACAAAGAATCAGTGACACTAATTGTTCAAC TACCATCAGTATTCACTGGAAATAACCTCACTATCCACCACGATGAGgat tcaaaaataataaaatttgatgaaaaatactcaaaattcgAAATCATATA TGGAGCATTTTATTCAAACTGTGAATATGAGCTCTCTACTTTGAAATCTG GCTATCGATTGGTTCTTGTCTACAAGCTTACTTGGAATGATTGTAAAATT CCTCAAAGTCGTATTGATGAAAGCAAAGAGGCTACACAAAAAGTGAAATC TGCATTGTCTCAGCTTTACCAGAATCGAGAGAAGTATTTTGGATGGATGT TTGAAGAAAAGTGGGATCCAGATACCATTGAAAGTGGTAGCAAATCGTTG AAAGGAATTGATTGTGCTACTGCTACATATCTAGAGTGGGCAAATAAAGA ATTGCCAGAGGATGAACAATTCTCATTTTATTTGGTCACTTATGAAAAAC GTGTCACAAAGAAAGGATACAACAAATTTGGCCATTACAGCCTTGaacAC CACCGCAAAGTGTGCGAAGAAATTGATCTTAAAGAAGGAGTTGACATGCA AACAATGATTAAATATCTTGACTTTAGTGGTTTACCAATTGATATAAAAA ATGATTTACTCCAATGGCAAAAAGGAAAGGGTTGGTCCGGAGTATGGACC AAACCTCGTCGAAAGACAACAATAGATTGGGGGCAAGCTGTAAGCAAAAG GATTGAAGACCATTGGACTTGTTACACTAGAACTGTTCTTTTAGCTGTCC CAACAAATCGTCGTTTCGAATATTTCTGTTTGTCTAAAAACCCAACGCAA TGTGTCCAATTTCTGAAGTACAATGTAGATTCGCAgtctgaaaattacaa aaaactgTTGAAGGAATTACTGGAAAAATTTACAGCTGATGATTTTAACT GTGGTAAGAATACACATTACGAGTTGGCTTATTTGTTTGTCAATACTTGG GATCCAGAAATGTCATTTATCTATATTGACAAAATTATGGCTGGGACAAT GAAGCGCTTTAAAACGCTCGTGTACGGTGTTCCTCCCGGATGCGAAGAAC CAGTTGCCAAAATTATTCAATCAGTACCCTGGGAAAAGTTCAAAGAGACT TATAAACACATTCTTGAGAATATAGTAGTTAAATGGTATCCAAATGTGAT GAAAATTTATGAGCTAACAGGAATTGTTGGGATCATGGACATGCTCATTG AGCAGagtttaaaaatgttctcaaaagaTCGGTATGCAATTCAACTCATC AGTGGTTCAGATCCAGCAAATCCATATTTCTGGGAAGAAGTCTTTGAGTT TGTTTGCAACAATGATGAGCTTTATGAGACGTGGTTTGAAAAGTTTGCTA ACCATAAAGATATCACTTCCAGCCTTTCTTTGATGTCACGGTTCTTCAAT GAAATGCATCACAGTGATCGCCCACAATCATCCAAGTCTCGTATTCTGAA TCTTTTCATCGATTGCATCAAACAAAGTGACGATTTGGTGACAAGGGATG ATCATACACCGCAACATTTTGAGTACGACGAAGATGATGACAAAGCCAGT GTTGGTAAACCTAGACATGGTATATCATTGTTGATTGCTTCTACCATTTA TCCTTTGCTTGAGAAATCTGATCCTTACAAAGAAGAGCTAACTTACCTGT GCGACTATCTCATTTCAAGCAACTATTCTGTTATCATCAGCAgaattttg attggcttaattgAAGAAGGTCAACCAGCAAGCCAAACTAGAGGCTTCAA AATGATTTATGGCATGTACATGAGTAGACTAATTGAGACAAATTTGAAAG CTTCACAGATTGAGGAAATAGTCAATATCGCTGAAATTCTGTTGCGTAGT GCAGAATACAATGGGACAAACAAATCTAATTATGAGGCGATATGTAAATC CTTCAAAGAGCCTCATTTACTGTACAAGTTAGctgtaaatctttttcaat gttCTCGTGTTCTCGCCGACAAAAAGTCAGATTTTAATGATGTGATCAAT TATGCTCTCAAGCTGTTCCTTGAATCTTTGGAAACCAAATCTATGAGCTG TATACACCCACTTTCCGAATTTTTGGTTTTCTTGGTTGAGAATGTGACAG AATTTGAAAATNTGAATCTTTGGAAACCAAATCTATGAATGTGCTCAATC GTACCACAGCCCATAACGTTTGCAACAGATGGTGTTTTAGAACGTCCTCC ACTACCAGGCCTTTATATCAAAGATGTTGGTGATATTTCGTTACCATTAT GTGAATCACAAGCCAAAGAAATTATTGAAATGGTTAAGGATAATTCTGAC GATCCTTCTGTTGAAGAAAGGAATTCCTGGGAGATCAAATCAAATCAGCT GGCTTTGGAAAGTGAAAAGTTCGAAATGACCTGGAAGAAAAAGATTATTC AAAAAGTCATTGCCGAATTAGGCTGTAAAGCTTCAGAGGAAGTCACTGTG AGCACTCCAAGAGCTGTTTTGTATGGGAAAGGTGCTTCGATTGACTTGAC AAGCGATGATGAGGACAAAGAATCAGTGACACTAATTGTTCAACTACCAT CAGTATTCACTGGAAATAACCTCACTATCCACCACGATGAGgattcaaaa ataataaaatttgatgaaaaatactcaaaattcgAAATCATATATGGAGC ATTTTATTCAAACTGTGAATATGAGCTCTCTACTTTGAAATCTGGCTATC GATTGGTTCTTGTCTACAAGCTTACTTGGAATGATTGTAAAATTCCTCAA AGTCGTATTGATGAAAGCAAAGAGGCTACACAAAAAGTGAAATCTGCATT GTCTCAGCTTTACCAGAATCGAGAGAAGTATTTTGGATGGATGTTTGAAG AAAAGTGGGATCCAGATACCATTGAAAGTGGTAGCAAATCGTTGAAAGGA ATTGATTGTGCTACTGCTACATATCTAGAGTGGGCAAATAAAGAATTGCC AGAGGATGAACAATTCTCATTTTATTTGGTCACTTATGAAAAACGTGTCA CAAAGAAAGGATACAACAAATTTGGCCATTACAGCCTTGaacACCACCGC AAAGTGTGCGAAGAAATTGATCTTAAAGAAGGAGTTGACATGCAAACAAT GATTAAATATCTTGACTTTAGTGGTTTACCAATTGATATAAAAAATGATT TACTCCAATGGCAAAAAGGAAAGGGTTGGTCCGGAGTATGGACCAAACCT CGTCGAAAGACAACAATAGATTGGGGGCAAGCTGTAAGCAAAAGGATTGA AGACCATTGGACTTGTTACACTAGAACTGTTCTTTTAGCTGTCCCAACAA ATCGTCGTTTCGAATATTTCTGTTTGTCTAAAAACCCAACGCAATGTGTC CAATTTCTGAAGTACAATGTAGATTCGCAgtctgaaaattacaaaaaact gTTGAAGGAATTACTGGAAAAATTTACAGCTGATGATTTTAACTGTGGTA AGAATACACATTACGAGTTGGCTTATTTGTTTGTCAATACTTGGGATCCA GAAATGTCATTTATCTATATTGACAAAATTATGGCTGGGACAATGAAGCG CTTTAAAACGCTCGTGTACGGTGTTCCTCCCGGATGCGAAGAACCAGTTG CCAAAATTATTCAATCAGTACCCTGGGAAAAGTTCAAAGAGACTTATAAA CACATTCTTGAGAATATAGTAGTTAAATGGTATCCAAATGTGATGAAAAT TTATGAGCTAACAGGAATTGTTGGGATCATGGACATGCTCATTGAGCAGa gtttaaaaatgttctcaaaagaTCGGTATGCAATTCAACTCATCAGTGGT TCAGATCCAGCAAATCCATATTTCTGGGAAGAAGTCTTTGAGTTTGTTTG CAACAATGATGAGCTTTATGAGACGTGGTTTGAAAAGTTTGCTAACCATA AAGATATCACTTCCAGCCTTTCTTTGATGTCACGGTTCTTCAATGAAATG CATCACAGTGATCGCCCACAATCATCCAAGTCTCGTATTCTGAATCTTTT CATCGATTGCATCAAACAAAGTGACGATTTGGTGACAAGGGATGATCATA CACCGCAACATTTTGAGTACGACGAAGATGATGACAAAGCCAGTGTTGGT AAACCTAGACATGGTATATCATTGTTGATTGCTTCTACCATTTATCCTTT GCTTGAGAAATCTGATCCTTACAAAGAAGAGCTAACTTACCTGTGCGACT ATCTCATTTCAAGCAACTATTCTGTTATCATCAGCAgaattttgattggc ttaattgAAGAAGGTCAACCAGCAAGCCAAACTAGAGGCTTCAAAATGAT TTATGGCATGTACATGAGTAGACTAATTGAGACAAATTTGAAAGCTTCAC AGATTGAGGAAATAGTCAATATCGCTGAAATTCTGTTGCGTAGTGCAGAA TACAATGGGACAAACAAATCTAATTATGAGGCGATATGTAAATCCTTCAA AGAGCCTCATTTACTGTACAAGTTAGctgtaaatctttttcaatgttCTC GTGTTCTCGCCGACAAAAAGTCAGATTTTAATGATGTGATCAATTATGCT CTCAAGCTGTTCCTTGAATCTTTGGAAACCAAATCTATGAGCTGTATACA CCCACTTTCCGAATTTTTGGTTTTCTTGGTTGAGAATGTGACAGAATTTG AAAATNTGAATCTTTGGAAACCAAATCTATGAATGTGCTCAATCGTACCA CAGCCCATAACGTTTGCAACAGATGGTGTTTTAGAACGTCCTCCACTACC AGGCCTTTATATCAAAGATGTTGGTGATATTTCGTTACCATTATGTGAAT CACAAGCCAAAGAAATTATTGAAATGGTTAAGGATAATTCTGACGATCCT TCTGTTGAAGAAAGGAATTCCTGGGAGATCAAATCAAATCAGCTGGCTTT GGAAAGTGAAAAGTTCGAAATGACCTGGAAGAAAAAGATTATTCAAAAAG TCATTGCCGAATTAGGCTGTAAAGCTTCAGAGGAAGTCACTGTGAGCACT CCAAGAGCTGTTTTGTATGGGAAAGGTGCTTCGATTGACTTGACAAGCGA TGATGAGGACAAAGAATCAGTGACACTAATTGTTCAACTACCATCAGTAT TCACTGGAAATAACCTCACTATCCACCACGATGAGgattcaaaaataata aaatttgatgaaaaatactcaaaattcgAAATCATATATGGAGCATTTTA TTCAAACTGTGAATATGAGCTCTCTACTTTGAAATCTGGCTATCGATTGG TTCTTGTCTACAAGCTTACTTGGAATGATTGTAAAATTCCTCAAAGTCGT ATTGATGAAAGCAAAGAGGCTACACAAAAAGTGAAATCTGCATTGTCTCA GCTTTACCAGAATCGAGAGAAGTATTTTGGATGGATGTTTGAAGAAAAGT GGGATCCAGATACCATTGAAAGTGGTAGCAAATCGTTGAAAGGAATTGAT TGTGCTACTGCTACATATCTAGAGTGGGCAAATAAAGAATTGCCAGAGGA TGAACAATTCTCATTTTATTTGGTCACTTATGAAAAACGTGTCACAAAGA AAGGATACAACAAATTTGGCCATTACAGCCTTGaacACCACCGCAAAGTG TGCGAAGAAATTGATCTTAAAGAAGGAGTTGACATGCAAACAATGATTAA ATATCTTGACTTTAGTGGTTTACCAATTGATATAAAAAATGATTTACTCC AATGGCAAAAAGGAAAGGGTTGGTCCGGAGTATGGACCAAACCTCGTCGA AAGACAACAATAGATTGGGGGCAAGCTGTAAGCAAAAGGATTGAAGACCA TTGGACTTGTTACACTAGAACTGTTCTTTTAGCTGTCCCAACAAATCGTC GTTTCGAATATTTCTGTTTGTCTAAAAACCCAACGCAATGTGTCCAATTT CTGAAGTACAATGTAGATTCGCAgtctgaaaattacaaaaaactgTTGAA GGAATTACTGGAAAAATTTACAGCTGATGATTTTAACTGTGGTAAGAATA CACATTACGAGTTGGCTTATTTGTTTGTCAATACTTGGGATCCAGAAATG TCATTTATCTATATTGACAAAATTATGGCTGGGACAATGAAGCGCTTTAA AACGCTCGTGTACGGTGTTCCTCCCGGATGCGAAGAACCAGTTGCCAAAA TTATTCAATCAGTACCCTGGGAAAAGTTCAAAGAGACTTATAAACACATT CTTGAGAATATAGTAGTTAAATGGTATCCAAATGTGATGAAAATTTATGA GCTAACAGGAATTGTTGGGATCATGGACATGCTCATTGAGCAGagtttaa aaatgttctcaaaagaTCGGTATGCAATTCAACTCATCAGTGGTTCAGAT CCAGCAAATCCATATTTCTGGGAAGAAGTCTTTGAGTTTGTTTGCAACAA TGATGAGCTTTATGAGACGTGGTTTGAAAAGTTTGCTAACCATAAAGATA TCACTTCCAGCCTTTCTTTGATGTCACGGTTCTTCAATGAAATGCATCAC AGTGATCGCCCACAATCATCCAAGTCTCGTATTCTGAATCTTTTCATCGA TTGCATCAAACAAAGTGACGATTTGGTGACAAGGGATGATCATACACCGC AACATTTTGAGTACGACGAAGATGATGACAAAGCCAGTGTTGGTAAACCT AGACATGGTATATCATTGTTGATTGCTTCTACCATTTATCCTTTGCTTGA GAAATCTGATCCTTACAAAGAAGAGCTAACTTACCTGTGCGACTATCTCA TTTCAAGCAACTATTCTGTTATCATCAGCAgaattttgattggcttaatt gAAGAAGGTCAACCAGCAAGCCAAACTAGAGGCTTCAAAATGATTTATGG CATGTACATGAGTAGACTAATTGAGACAAATTTGAAAGCTTCACAGATTG AGGAAATAGTCAATATCGCTGAAATTCTGTTGCGTAGTGCAGAATACAAT GGGACAAACAAATCTAATTATGAGGCGATATGTAAATCCTTCAAAGAGCC TCATTTACTGTACAAGTTAGctgtaaatctttttcaatgttCTCGTGTTC TCGCCGACAAAAAGTCAGATTTTAATGATGTGATCAATTATGCTCTCAAG CTGTTCCTTGAATCTTTGGAAACCAAATCTATGAGCTGTATACACCCACT TTCCGAATTTTTGGTTTTCTTGGTTGAGAATGTGACAGAATTTGAAAATN TGAATCTTTGGAAACCAAATCTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00060313-exon-scaffold_340-1491911889:68787..69369 | TCONS_00060313-exon-scaffold_340-1491911889:68787..69369 | Clytia hemisphaerica | exon |
TCONS_00060313-exon-scaffold_340-1510915933:68787..69369 | TCONS_00060313-exon-scaffold_340-1510915933:68787..69369 | Clytia hemisphaerica | exon |
TCONS_00060313-exon-scaffold_340-1575043694:68787..69369 | TCONS_00060313-exon-scaffold_340-1575043694:68787..69369 | Clytia hemisphaerica | exon |
TCONS_00060313-exon-scaffold_340-1491911889:70822..71308 | TCONS_00060313-exon-scaffold_340-1491911889:70822..71308 | Clytia hemisphaerica | exon |
TCONS_00060313-exon-scaffold_340-1510915933:70822..71308 | TCONS_00060313-exon-scaffold_340-1510915933:70822..71308 | Clytia hemisphaerica | exon |
TCONS_00060313-exon-scaffold_340-1575043694:70822..71308 | TCONS_00060313-exon-scaffold_340-1575043694:70822..71308 | Clytia hemisphaerica | exon |
TCONS_00060313-exon-scaffold_340-1491911889:71887..72118 | TCONS_00060313-exon-scaffold_340-1491911889:71887..72118 | Clytia hemisphaerica | exon |
TCONS_00060313-exon-scaffold_340-1510915933:71887..72118 | TCONS_00060313-exon-scaffold_340-1510915933:71887..72118 | Clytia hemisphaerica | exon |
TCONS_00060313-exon-scaffold_340-1575043694:71887..72118 | TCONS_00060313-exon-scaffold_340-1575043694:71887..72118 | Clytia hemisphaerica | exon |
TCONS_00060313-exon-scaffold_340-1491911889:72824..75492 | TCONS_00060313-exon-scaffold_340-1491911889:72824..75492 | Clytia hemisphaerica | exon |
TCONS_00060313-exon-scaffold_340-1510915933:72824..75492 | TCONS_00060313-exon-scaffold_340-1510915933:72824..75492 | Clytia hemisphaerica | exon |
TCONS_00060313-exon-scaffold_340-1575043694:72824..75492 | TCONS_00060313-exon-scaffold_340-1575043694:72824..75492 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_340 | supercontig | scaffold_340:68787..75492 + |
Blast
The following BLAST results are available for this feature:
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