XLOC_037558 (gene) - C. hemisphaerica

Overview
NameXLOC_037558
Unique NameXLOC_037558
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_330:408276..415922+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037558 ID=XLOC_037558|Name=XLOC_037558|organism=Clytia hemisphaerica|type=gene|length=7647bp|location=Sequence derived from alignment at scaffold_330:408276..415922+ (Clytia hemisphaerica)
AGAAAGGTATTTATTTTGGTATGTTTATTAAATTGTTCAATCCTTTGTTT GTTTCAAGGGAGAATCGTCTGTCGATGTGTGCTGCTACGCTGGAAGTCAA GAACTCACTGGGATTCAAGATAATATCGGTTTAATCTTTTGATTTGTCTA TTGTTAAGAGCGAAAAACTTTGAGAATGTTCACGAACAAAATTAAATTCG GTGAAGATGCTTATTTTTTAGTCCAAACAATAGGAAAGACCTGACACAAG GAATAATTTGAAAACTGATATTTCTTTACCTCTTGATAAGAATTTTGTTT ATCTTGCAAAAATGTACTTGATGATGTCACCCTGGTGTCTTGCGAAATCA AAGCATTCCATTGACCGTGTTCATACGCAAAAAACAACAGAGAAAGAAGC CTACACgcttataagaatattcataaaGAAATTGGCCAAacaattaagaa tatgctaagaacgTTCACGTTgttatatcttttgtcaaataatGCAATTA ACGTCAATAATTAATCTTAATACTCTtgaacgcaaaggttgatgggatta gagctcgtacaaacacatcgagaggaATTATTATGTCAAAAGTAAAATAT ATTCTTAGTTTCACTATCTACGTATAAATACAGCCATGACAAACTTTCGA AAGGCAGTAAGCAGTGCTTTTATGCTTTAATGCAAAATGTTTAATATTGT TTTGTAGAATCTGAACACAAACGGTGACGGTTATACCACCGTAACAAGAT GTTCAAACATAAGATGATTTTCATGGATTGAGGTTTGGCTAGGGGTAGTT TTCGATGATTTATTCTTTTAAATTCTATTCAAATTCCTCAATATTTGAAG GTTTGAAATAAAATGTCTGTGTGTCCAACTTTCATTTTCGCGTTCACTTT TGTAGATCTTGCAATATGAAAAGTCTTTTTGGCAAAACAAGCTTTCCATC AGCATCAGTATTCATTtatatattttctattttgttccAGGTAGTTTTCC AAATAAATGGCCAAGGCATCAGCGGACAAGGATTTCGATCATTTATACAA ACTGGTTCTAGTAGGAGATAGTGGTACAGGAAAAACTGGTCTCGTATCAA GATTCGCACGTGATGAGTCTAATGTTAATAAACAGTCAACGATCGGTata gattttaagataagaagcATCAAAGCTGCTGGAAAAACTATAAAAACACA GGTAACTCTTTTTTTTCTACTTCTGCTTTACTTTGATAAGTTATTCACAG TTTTGCCATTTTGGAGAATTCTCCGTTAACACACGTCAACAAAAACTTAA GCAATTCAAAGATCTGTGTCTCTTGATTCAGCCACTTAACACCGTTTGAC CACAGTGTGGAAGAAAAGTTAAAGTTAAGGAAATTtggctttgttttttt tataagcatataaaaatctgaaaacaggctcagagatgcttaggtcgaaa gcttaataaggctgaaaaaatgctttagggatgcttatatcctaacaTGA ATTTTTCGAGGATGCTTACAAAAGATAATGAATCAGGCTCAAAATATGCT TAAATTAGCCTATAGAACTCTTGGCTAAGTTAATGCCCATATAACAAACG AAAGCGGGGAAAGGGGAAAAAAAGAAACAGGTTTTTGGTTTAGTTTTCGA TTTGCTTTGCAATggcttcacaaaaaaataaagtagcTATACTACAAAGT AGCTTATACCTTTTTCATAGGCTCGAggtaatgcttagcatatgcttaat tttcccCACATCTGAGCTTAGATATGCTCATAAGTGCAatgcttgagaaa aaaaaacatgtatttcaaatttaattttttgatttgattttaatcGTCTT TTTGGACCCCAAAGAGGGTTCATTTGAATGCATAGCCTTTTAAgggggtt ttcaggggtcttaaataccgtcataccgacaataatttgggtcaaatacc gtaatatcGTCGATGAAAGAAGCCTAATTATCTAAATACCGGTACCGGTA GAAAAttaaataccgtaatcccgtcgtttttttctggtaataccgattta ccggggaaaaaaaggcccaataccgtcgtaccgtaaaaattacccccccc ccccccaaaaaagcccccccccccccccttaaactTTTAAGACAATaagg tttttttcaaatttttcacttttactaATTCTGGTTGTATACTCTACAAC CTTGGAAAACACTTAGTGACCCCTGGCCTGGCCTTTTTGGAAGTCTTCAA AAAACGGTCCATAGTTGTTGGTtgcaaaattcaattttatggCATGTACA TGTCAAGCGATACATCAGCTCTTTCGCTTTAAGCAAAGCACCCTACATAC ATATTTACACTActataaatttgaataaaacccTTTTTTGTCTTTAATTT TCAGATTTGGGATACAGCGGGTGGAGAGAGATTTCGGACCATCACAAAAG CATATTATCGTGGTGCCGTCGGtgtttttattgtttacaaTGTCTCTGTG CAAAAGACTTTTGAGAATGTCCAACGTTGGTTAGATGACGTCCGAGAATA CTCTGGTCCTGAGGTTGTTCTAATGCTAGTGGGCAACCAAACTGTGGTTG AAGATTCAGCTGCTAAAGAAGGTTCTGTCAACACAAAAGAAGCTCAGGAA TTTGCtaaacaaaatcatttgatgTTTATGGAAACTTCAACATTAGATGG CTCGAATGTCGAATTAGCTTTCATCTCCATGGTTCAGAAGAtttatgaaa aacaaaacaaactggaGAAAGATGATGAAGTGGAGCTCTTTCAGGCGCCA GAGAACCTCGAAGATCAAAGAGGATATGAATTTGATACTGTGGGCGATAG CAGACGTCGTGGGCATGAATGCGCCTTTTGTAATATGATAATCAAGCAAT TTACTGAATTACCATGTGGGCATGGATTTTGTGGAAGCTGTTTGGAGACT TGGGAACTAAAGGAAGATGAAGGGTAATCatttattttggtaaaattcAT GAGCTTTAACAGGGAGTttacgggaccttgaaaaccttgaaaatcgtTAA GAACATTGAAAAGTACTTTTTCTTATTCATCCTAGGTATTTATAGAATAT CCccatggctgaatttcttggggcaaatggggcaatgCGTGACGAGTTGT GGCAACATTAGATATAGAAAACTCAGTGATACCCCGTGGCtgacttaggc aaaaataggtgctgtgTATGTGCGGATGGTAAGGGTcaattttttcacct ttcaaagtttctctaagggttgcaaaaatctgaaaaaaattagtctctct aagtgtcggaaaattcacgatttttaggaaatactTTTGATTAagagtga aaaaattgtaaaaaagtctctaagGCTCTTATCtagggaatttttcaaaa atcgaagaaaattaagggtcaccttttcagcaaaaatcagtttctctagg ggtcggtttttggaggtccaatccgcacatacccctcatccgccaaccct agtaccccctccggGCCTAACTCCTAACTCACCAACTAAAACATTACCTA TAATTTTTTCTGAATGGGGCAGTGGCTAGAGTTTAAGTTTTTTTCTAGAA TTAAGGGTTTTAAGTCCTGGGGTTGGTACTTGGGCAAAAAGGAGTACGGA GATCTTTTTTATTtccatgagtcccaggtagggtcacgATAttaccaaaa tagaaaaatctttCCCTTGTAAGAGTACCTTTTGGGTTGGGGGATTTCGG AgaaaaattgggaaattttgagaaaattttgtaatttcagtTCCATTCAA GataactttttttgcaaattttggcaaaattgttGGTCAGCAAGAGTGGT AACCCCGTATATACCGTACCGTACTATCCTGGGTAccacaaaaccttgaa aagtaccattatttttgccaaaaatttttggaaaaccaCCTAAAAATGTT GATGAACATGCGTAGACACCCTGTATGTCACACAAATAATCTGTAAGTGA ATAAATGACTCTCGAAATGACTTGTTAAACAGAGGAAATATATGACGCTT GTCATCCAGGGTAGATTGTcaatttttataggaaaaatcCGATCTCGTGC ATCTTGTGTAAAAAAGAATATGACGTCACAAAGGTTTGTTGTTTGAGATT TTTTATCGTGTTTCTTCCTGAAATGGcctgaaaatatttaaatcatTTAT TCCACACTCTTCAAAATAAAGGAAATTGCAAGATCATTTATTTTAACTTA TTCTGTACATTGTGTATTTTTGTAAGTTTTCATGCATCCGCTAGCGTAGA ACAGTTCTGGACACAACGAATATGTTATTAGATGAAAAATATAGGGGTAA CCCTTCCTTCTTCAGAAACAGACATCAAATTTTATTGATCGGCAAATAAC AGCAGATTTGGAAGTTTATTGCAAGAAAAAAGACGAAGGATGCAAATGGT CTAGTTTTATCGTTGATTTCGAGGTACCACATGTCATGCTTTTTAGAGTC GGATTTTAGTGTTTTATTTGATACTGGCCGAGTTTTAAAACCTGTCaaat tttaaatgatcaataTCAATAAGCGTAAAAAGCACCGATAGCGTGAAGTA TAATGTAAAAAGATTATTCAAACCTCTTTTTTCATATCTAGGGACATTAC AAGAATGAATGCCAGTTTGCGATTATCCAGTGCGTGTTTGATGGATGCGA ATTATACTTCAAACGAAAGGACAAGGCGATCCACAACAAGAACTGTGTTA AAAGGATTGTACAATGTCCTCATTGCAAACAAGATTTTCAATTCTTTAAA TTGAATAATGTAAATATCTCATATTACTGTCCGACATATAAAATCTTCAC GGTTCTAGCTGAATTAACCCTGGTAGTTTTTGAATTCTTGTGGAAGGATT TTTTCTTTCTACTCAACATTTTATGTAAAATGCACTGTAGGGTACCTTTT CATTGTTCAAGGGCTGcacgattttgaaagccattgTTTTGGCGGCACGT gacgtcgtttagaaatcgagtgcctcCCCCCACCGGGACTGCCTCAAATA GATTCTCATCAAATGTTCGATTTCTTCGATTTTTCAGCCACATTTCGGAG AATGCGATCAATTTCCAGTGGATTGTTTAAATGAAGGATGCGAGGTCAAC CTTCCAAGAATCGAGGTATTCCTCGTTTGATATTGCTCTTATTTCTTTAC TggttaaattttcattatttacaTGCTTACCGGTGCTCTTACGTACGTAC CCAcattaataaaacaaaaaatcacaaatattaTTATTTCAACAATAACT TAGGGGAATATTTTCACGGAATTCAATTTCGCGGTTGAGTGAACATTTTA TTTAtaatatggcctattttgccctaaaatagTTTAAAAACGAAAACGAC GAAAATTTGTTCCACGAATATTTCTTCACTTATGGTAAAACTTTGAGTTT TTGTTAGACATCTAGTCTCTATCAAACGTTCAATTTTCTAAGGATCGCGA AACCCAGCATCCATCAACCCTACACCACCCTCCAAGCATTCCAGTGTTAT ACAACCAGGTTTTTCATCTCAAAAACAAAACTACAGAAAATTGTCacatt ttttgggattttctttCCAAGAAGTCTGCTTTATAGGCGTATTTGCGATT TTTTCAAAGCTATCAAGTACCAATCTAACGTCCTCCTCCATTTTCACCTC GTTCTTGAAATAAAGTATAACCTCGCAGGTTCAAGAACATTCTTCCTCAT TTTGGAATATTCAATTGTAACATTCTGATGCTACCCCAGCTATTTCCTTC CTCGTCGAATTCGAGGGACTGTTCATTCAACGCCTCCCTTTATCAGACGC CAGAGTAATCCCTTTACAGGTTAtataaactttttcatttatttcagatg aaaaataaacatgGTCCAGCATGCAAGTGGGAAAGAGTCGGATGTCAGTT TGAAGACTTCGGTTGTCAAACCAAGGTATCAAATCATTTTTGTCATTGCA ATGTACTGAATATTTCTGTTCAAAATATATCTCAAATCTTATTTGATATA ATACTTTCACAGGGAATCGAAGCTTCAATTGAGGGACAAGAGGTTAGGGT TACTGGCGACATTTTGTGGGTAGTCACTTGATTGCGGTGTGAGAGTGTAA GAGAAGAAGTTTTGGCAAATGAACCCATCActaattttggtgcaatttag cgagaattaattttggcgaacgatcaatttttgttcaatattttagctga aaaagagtgaaaaaagggtttttaggaaaaatagagatactaaaatgaaa gaaaattgaatttggtGAGaatttattttcgcggatgacctATAATCAAT TATGataatttaaatttctttcctGACGGTATTTCCTAAGCCCTCTGATG TTCATTTCACCTGCCTTGGCTATTGTACAAAGGTATACACCCTCTGAGTC GAGTCTGTTCTACCTCTATGAGTGACCCAAGTATATCAGCCACGTTTGTA TATAGCACTTGATCAATACACATGGTCGAACGGTacccttttcttttttt gccgacgaCTAGTTTGCAAGCTTTcatgttcaaatttttttctctcattg TTAATGTTTTCTAATCATCCCTGTTATAGCTATTACGATCAGAAGAAGTC AAGCACAACAATGAGTTCAATATTCAACACACCATGTTATTGATGGCCAA ACAGAGAGAAACACTAAACGATCTTCAAACGACCAAAAACGATCTTCAAA CGACCAAAAACGAACTTCAGACAACAACAACCGATCTCCAAACAACGAAA AACGATCTCCAAACGACGAAAAACGAGCTGCTAGAATCGAAAAAATCATT AGAGGAACAAAAGAATCTCAATAAGGAAATAGTCAACAATATCAACAGAT TGCATGTTGCAAATTCTTCCGTCGAAAGCCTTTTATCACTTCTTGTAAAT GGAGACATACCTCGCGCACACACAAAGCCGATTGTATACGATGGTGTGGA ATTTTGCTCTTCATTAGGAAACCACCAACAAATGATGAATACCATTCTTT CCAAGATGGAATTCGGTAAAACTTACAAAACAGATCTTGGAAAAcgttta ttttttacatttcgAATGATTCATGACGTCACGTTGTATTTTCAACTATA CAACAATTATGATCTTGCTTCCACCAGAGAGTCTTACCGAAAACAAAATA TGTTAGTTGATGGGAGGGACCAACTTATTCTTGTATACTTCGATAAAAAT CGAGGTGATCAATACCAAGTTTGGATGAATAACCGCGACTTCACTAAAAC AAATTCGTCCGTTTTTCTACACAATATGAAAAAGAATGGTGACCGACGAC AAATTAGGTATCATGTACTTGAGAACATCGCTTGGGATGACTATAGAAAC GAAGATAAAtatgttctttttgaattgatGAAGAAATGATTCAAACTGGA TAATATTTCAAAGAGACGCGTTAGAGTGAACTGGGGACGAGGTTGTCAAA AAATGAAATGGTCAAGTCATGCATTATGCAACATGTttggaaaaacattt tcttaatGATTAAACAATTTGAGTACTATCTATATACATTTACATCTGAA AAGTTAACAATTAATAATATATTCTACACTATTCTTCTTGCATGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059699TCONS_00059699Clytia hemisphaericatranscript
TCONS_00059700TCONS_00059700Clytia hemisphaericatranscript
TCONS_00059701TCONS_00059701Clytia hemisphaericatranscript
TCONS_00059702TCONS_00059702Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059700-proteinTCONS_00059700-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:408276..415922 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.72 1.43 0.74 0.67 2.27 1.94 3.61 4.69 2.74 3.39 2.58 2.09 9.61 9.77 15.89 15.94 4.52 5.6 15.14 16.52 2.74 2.49 2.53 3.69 1.79 2.9 1.63 2.74 10.79 8.93