XLOC_037556 (gene) - C. hemisphaerica

Overview
NameXLOC_037556
Unique NameXLOC_037556
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_330:308999..317101+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037556 ID=XLOC_037556|Name=XLOC_037556|organism=Clytia hemisphaerica|type=gene|length=8103bp|location=Sequence derived from alignment at scaffold_330:308999..317101+ (Clytia hemisphaerica)
TACATATTCTATTGTTAGAAAGACTATTTTGACCCCCGGATTCAGATTTA ATATTGCATACATTTCGAGTCTCCCNTTCTATTGTTAGAAAGACCATTTT GACCCCCGGATTCAGATTTAATATTGCATACATTTCGAGTCTCCCTCCTA AAATCGAAGGGGAGCAGCCTCCAAAGTATCAACATTACGGAGTGCTTTTG CAGAGAGGAAAGGCTTGTGTTGGGTtactttcattttgaaatacatttaa tttttcaatagatttcatttgataaaacttaaaaatgagtGAATCCAAGC CAGACATTTCAGAAGTTGCTGCCTTCGACTCATCCAAGTTAAAACATGTC GAAACAGAGGAGAAAAATACACTTCCATCGAGTGATTGTAAGTATAAAAC TTGTCTCCTGCTCTTTTTGCTGTACAGCTAGGCTCCTCATTTTAAACAAG AGGTGTATTTTTGGTCCGTCTTGATGTCAATTTATCTACTTCctcttgtt tttttcttttgtaaaccTGCTGAAATTCAGGAGATTAATATTAGATATCA TGGAATAGAGATAAAATCTTTCAGTTGGATTATCCTTCTTGAAATAGCTA CAACATGCTAGGTGTAATATACAGGACAGTTGTATATATTTGTATATGCT ACCCACTTtttttcaactaaaatggcTGTATGAGTATTTTTACTTTCTCA TGGCATGACTCTGCATGAGCAGCCGTcagcagatttttttaaatatctgt tattttttttcaggagagtaaattttttatggataaatctaggagagact tttcttcaaaacacccatgtaaaatccaggggtcgccttaaagacatctg ttcttaaaatccatgagcacattttaaggaaaaacacatacacgtcttct ttttttttaagaaactagttttaccaagcatcctcaatgtttcttaagaa atcggccttttgagccgatgtttcttacatgtttctaaactttttgacat aattagccttgattggaaggttcttataaaaaaccgaattaaaaaatgtt attttctcattcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagatgccagattttttttc cagggagcttcataattttcttaaaaggtctcattttctaggagcatttt aattttcttagagaatagctgttatatttttccaggagcgtAATATTTCT GGTGCTAATAAATTAGGGTCAGAATAAGTGCAGGGGGTGGGTTGGTTGGA AAATTCTTCAGATTTTAATAAATAACTTTACTAGGGAAGTTGGAAATTAT TGCACCTCTAAATACctccaaaataaggtaattatagaCTACAGATAAAG CCTGTAAAGGCTTGATAtttatttagagcaaaataagacATCTATCATGA TCATCATGATATCGCGTTTAGCAAAAGGTCAATGATGGTAGCCAATTTGT TTTACATGTGCACTACTTTGTTCTTTGTGTGCACAGACTTGTtagaaaca agaagaaaaatcaattgGAAAATCCTCCAATCCCCTAACAGTACTACTAG TACTATACATTTGTGTCATTCCCTAGATCATCAGCTATACCTCGAAACTA CCTTTTTCCAGCGGTTTTagcaaaaataatatttaaaaattgttgGCAAC TTCTTAGAGTATGTCAAGAGTTAGCGAAAGTGGTAAATGTTAATATCCTC ACAAAATAATCTAGACAACATAATCCTTTTAaggggccccccagcggttt gcgtgaatgcgtgaatgggcattttcagttgcgtgaatgcgtgaaaattg ggaaaaaaatgtgaatttttccttttttccaccgatcaatgtgcagtttt cccgattttccaatgtttccccgaatttttccgaaaattttccaatttcc tgAAAAAACAGGTTATTGCCTGAAAgttgaggaaaatttgcgtgaatgcg tgaatttcgaaaaaaaattgcgtgattgtgtgAATTGAGGGtctgctggg gggggggggctNAAATTGCGTGATCGTGTGAATTGAGGGTCTGCTGTGGG GGGGGGCCTCTTTTAATCCCCACCCAAAATGCTTGAACAGGAGACTTGCA TAGCTTTAGTAGCTTAACCCGTCCTACAATGGACATCCTACAAGGGTTAT CAAACCCTCTGGTGTCAAATTTTAAATATCCTGAAACCCTCCCTTGAAAC TCCTATCCTATAGGGGTTGAAGCTATGTTATATAACCAATAATAAAAGTT TGAAGTATTTTCAATGTGTATTTCATTCTCTTTTAGTGATTCAAGAAGAA GCAGTTGAATCCAGGTCAGAAGTCAAAGTCTTTGACAAATCTAACCTGAA ATCAGTTGAAACCGTTGAGAAAAACACTCTCCCAACTGCTGCAACCTTAA AAGAAGAAACTCGACCAGAGGTCTTGCCTGATGTTTCTGGAGTTGCAGAA TTTGATGCTTCTAAATTGAAACATGTTGAAACAGAAGAAAAAACCGTTTT ACCCACTTCAGATGTTATTCAAGAAGAAGCAGTTGAATCACGTGCAGAGG TCAAAGTCTTTGACAAATCTAACCTGAAATCAGTTGAAACTGTTGAGAAG AATACTCTCCCAACTGCTGCAACCTTGAAAGAAGAAACTCGACCAGAAAG TTTGCCAGATGTTTCAGGTGTTGCTGAATTTGATGCCTCCAAATTAAAGC ATGTAGAAACAGAGGAAAAATCTGTTCTCCCCACTGCTGATGTTATTAAG GAGGAATCTGTTGAATCAAGATCTGAGGTTAAAGCGTTCGataaatcaaa actcaaatcgGTTGAAACAGAGGAAAAGAACACTTTACCAACTGCTGCAA CTCTAAAGGAGGAAACTCGACCAGAGGTGTTACCAGACGTGTCGGGCGTT GCTGGATTTGATCCATCCAAATTAAAACATGTAGAAACAGAGGAAAAAAC TGTTTTACCCACCGCAGAAGTGATTAAAGAAGAATCGGTTGAATCTCGGT CAGAAGTTAAGTCTTTTGATAAATCTAAACTTAAATCTGTAGAAACAGAG GAAAAGAACACTTTGCCAACTGCTGCCACCCTCAAAGAAGAAACGCGACC AGAAAGCTTGCCTGATGTTTCAGCCGTTGCTGGATTTGATGCCTCTAAAT TAAAGCATGTAGAAACAGAGGAAAAAACTGTTCTCCCCACCGCTGATGTC ATTAAAGAGGAAGCGGTTGAATCAAGATCTGAGGTTAAAGcgtttgataa atcaaaacttaaATCTGTTGAAACAGAGGAAAAAAACACTTTGCCAACTG CTGCAACATTAAAGGAGGAAACTCGTCCAGAGGTGTTACCAGACGTGTCA GCTGTTGCAGGATTTGATGCCTCCAAATTAAAGCATGTAGAAACAGAGGA AAAAACTGTTTTACCCACCGCAGATGTAATAAAGGAAGAGTCGGTCGAAT CTCGATCAGAAGTCAAATCTTTTGATAAATCTAAACTTAAATCTGTTGAT ACAGAGGAAAAGAACACTTTACCAACTGCTGCAACCTTAAAAGAAGAAAC TCGTCCAGAGGTGCTGCCAGATGTTTCTGGAGTTGCAGGATTTGATGCTG CTAAATTAAAACATGtagaaacagaagaaaaaaCCGTTTTACCCACCGCA GAAGTCATTAAAGAAGAAGCAGTCGAATCACGATCTGAGGTTAAAGCTTT CGATAAATCAAAACTTAAATCCGTTGATACAGAAGAAAAGAATACTTTAC CAACTGCGGCCACTCTCAAAGAGGAAACTCGCCCAGAGGTCCTTCCAGAT GTTTCAGCTGTTAAAGATTTCGACAAGGGTCAATTGAAAGAATCAAAGAC CGAAGAAAAGGCAGTATTACCAACCAAAGAAGGTGAGTTCACAATTAAAc tgtttatttttataatttaacaTCTTCAGGGCTAGAAATAACTGTCggac ccaaatagcttcatgtccgacccaaaaatcgtaattttcaagctaaagca actctgatcggacattttgtccgacccacttgaaattgTTATTTCGAGCC ATGCAGTCTGTTTCTCAATGCTGGACTGCAGAGTAATTTTTAAGGTTTAT AAAAATCAGTTTGGTGCTAGAATGCTAAAACAATAGTAATACAGAATGTA AAACATCTTCATATTTTGCTTTTTAGTCATCGATGAAGAAAAACGTGAAT CGAGGGCGGAAGTCAAAGCTTTTGATAAATCTAACCTGAAAAAAGTAGAA ACTGTCGAGAAGAATTCACCACCAACTGCTGAGGGTAAAACTAGTGAAAC TGTAcaatctgaaaataagaaaccTGAAGTATCTTCTGAGGCAAGCAGCC CTTCAGAACCAACACCCACTACTACCAATGAgagtgaaaataaaaagaaa ggttgTACTATCCTATAACAAACACACACCAACACGTCATTCATAACGTC AAATCTTAAGACGTAAGTCCTTCCTACTGCTATACTGTTTCTCACTGCAC ACACTGACTCCTTTTGCACCACACATACATTACAACACAAAACACACCCC CTATTTATGAATACCACAATGTTTTTCATGCTTGAACTACATTGAGTTTC ATGCTCTTTTTTGAATGCTTAGAATGTCATTTTCATcggaattttctttg aattgacTTGCACTTTAAACACATTTATGATTTGAAGCTTGTCTCTACAC TTACTAATacctttttctcatattttgaCAGTCTAAGCATGCCAGAGCGA Ggggaatatttttaaatatttcttatttcaattttgttatgttttcacaa cACTGACTGATAAAGACCCAAAATGTGTAATTGATTGATGCATGAGATCA TTTCTTGATTACCACATTCAAACACGGGCCTAGAACATTTCTTCCTTCAC TTTGCATTCAGATTCGAGTTTCAATTATTGTATAATCAACATACATATTT AAAAATTAACATACCAAACAACATAATAAAAAGAGGAAATCTGAATCCAT TCATGATCAATTTAAAACGAAACAATCATTTAGATGTAGATACGTTCAAT AGATTAAGCATAAACACTAGAAATATTTTAACCTAAATTCAAAACTAGAG CACGAAAtcatttgatatgaaatttctGTATGACGAATCTCCAAGCCATG ATGTTTGTAAGTTATGATTTACTTTTCATTTCTCCTCACCATTCAATGCA AGCAACAAAATTGAGAATCATTCAAAAAGCAGTAGGAAAGGCTAACCACT ACTCAaacctttcaaaacaaaatcgaaTAGCACCGTAACTTTTGACAACC cactttttatttattatatcaaaatagaTAGATTTACCCTGGAGTACATT CCAGAGTGGCCTGCCTCATGCCAATTTTGCCTCTCTCTCATTCAGGCGGT GTTACCCAGTATGTCTTGGCCGTTGGCTTTGCTTTTGTTGCTTGGGTCTA TTTCCAATATTTTCGATAAAATACACAAATCAGAAGGAGGTATTATATAC AAGTAACTTTTCTGTGAAAGCGAACTGCCTTCTCACACGTTTCCTTGCAT TTCACATCTCGTATTTCATTTTGCAACTAATTAGCAACTCTGTACTCTCG GTCACTCAACATTCGACCTTTGCAAATTACtaaattcattgaaatttttc atttttccaccAGCTCCCACCTGCTTCTAATTCTTCTggaatattttttg taaaaaaatcttCACCAAGGTCGTTATGCAGTGGagcctctttaactcga acctctattaactcgaacaagttttatggtcccttcaatTAACAAAGCCT TTGTTCACCGTGCGTATTCGAGTTATGCGACTCACTGTACTTTTAACACT CCTTTCTTCGACTTTGAGTTTTTGAAAAAGTCTCCAAGTAAGTATTTTTT TTGTGGTGGACCCCCGTTGTTAAGGTAGCCGAGAGTACTCATATACACTA CTGATAAAATAGAGTAACGTTTTACCTTCATTCAAAGCTAAGCATTAACA TATTTCACACTTTCGCAGAAAAGCTTTGTATATAACTTCTCTAAAGTAGA TTTCAACCACCACTGAACTTTCAAATAATCGATCACGAAACATTCAATAA AAACTTTAGATCGGAAAATAATCACTCTAAGTAAAATCTAAACCAAGCTA AACAAACTCTCCCTCCTTTACTGTAACTCGTAATACTAACCAAATCTGAA AACTATTGTGTTTCCTAATTTCACACTAGCTCTTCTGGAGAGAGTAATAT TTTAggattttgttttaaaagtgTTCTGAACTTCTAGAACACTGTATTCT ATATATACTAGCTTTGTTACAAGAGTATGGCAGAAAAATTTGAGCTTTCC TACAAAGAACTAGAAAGTACTTTTTATTACATTATTTCACAACTTGGGCT TGTTCATACGGTTACTCAAATTATGTAAGAGACCGTAGGTTTTTTCCatc tacagtgtgtcccaaaaagcGGACAAAGTTTTATATAAAGTAGAATCCTC ATAATTTatgccaaattttatgacttgtttACTTAATATTTCCATCTCAA AAACCTattattcaatcatcttgggaattAAATACCCATTGATTGATCAG AATTGCAATCTTATTTCAAATATTCTAAGCCCAGTTTAGATAATGAGTTT GAGGGTTTTACTTCATATATAAGAATGCCctcttttttgggacacactgt ataccGTCAAGTATTGATAAATTCTGGTAAGTCTCTAAAAGCCGTGTATT TTGGGCTTTTCTCATAGTTTGAATCTTTTTCATTCTACAGAAATCGCTAA GGAGAAAGGAGGACAGTAGAAAGCACGAAAACAGTTCGATTCCCATCAAG ACCCAATACTTTCNCAAGGAGAAAGGAGGCCAGTAGAAAGCACGAAAACA GTTCCATCCACACCCAATACTTTCAACAACATAACCCAACAGACCGAACG ACAGAAACGACGCTCGATTTTAACTTCAGAACTCCACTAGCTCGATGAAT GGTACTAGAGACTCAAGTATGATTCAATAGAatgtaaaaaagtaaaatat accTTTAAAAACCAAATAACTtatgaatttttataaaaaccaaatacgta aatgaattttttgtttgtaccGTTGAGAGCATTTTTGGAATGTGTGTTTG TGTGTTTTGTTATAGATATTAAAAATGAATTCTTAACTTATATGATATTT TATTTCCtaattatttttgttgttttttgcttttattttggATGAGACTA CGGGTCAAACTGCTGAAAAATCTGATACATGGTGTCAATTTCTTACACGA TGTTAGGAACCTCGGTGTAAGACCTTTTATCTGAGCTATTTGATCGGTGG TTTTCattcagtatttttaccaaaaaaatgaatatatgaaaaaatatcag aactagatcttatttttctatttacgGCTGGTAAATTATGACTTGACTTT TacctgtttttcaattttgtaactttttggATAGATCTTTATAGTAAATT ATATCTTTGTTCTGTTTCACGTTTTTGTAAGCTTTTTCGCAAATTATTCT ATGTAATTTTTCCTCCGCTTATGTGTGTCCGGCTTGCCTTTCACTAAGAA GGCTACaaatgtaacttttgatagttttgtaagtaaaaaatataacaaCG GATAGAACGTCTTATAATTCTTTACTAACTACTTCTCGTTACTCTTGGGG ACCCTACTTTATCGGTAAAAACCAACTTGGCCAATTTCTTGAAAAACAAC TTACTCTCAGGTGCATATTAAACGCATGtcgatttttagatttttatccA ACCCCTGGACGAAATTTCAGCTGTTTAAAAGGAGATTAATTAccaaggga act
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059686TCONS_00059686Clytia hemisphaericatranscript
TCONS_00059687TCONS_00059687Clytia hemisphaericatranscript
TCONS_00059688TCONS_00059688Clytia hemisphaericatranscript
TCONS_00059689TCONS_00059689Clytia hemisphaericatranscript
TCONS_00059690TCONS_00059690Clytia hemisphaericatranscript
TCONS_00059691TCONS_00059691Clytia hemisphaericatranscript
TCONS_00059692TCONS_00059692Clytia hemisphaericatranscript
TCONS_00059693TCONS_00059693Clytia hemisphaericatranscript
TCONS_00059694TCONS_00059694Clytia hemisphaericatranscript
TCONS_00059695TCONS_00059695Clytia hemisphaericatranscript
TCONS_00059696TCONS_00059696Clytia hemisphaericatranscript
TCONS_00059697TCONS_00059697Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059688-proteinTCONS_00059688-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:308999..317101 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
242.89 228.94 75.85 48.97 104.49 84.69 235.17 276.04 252.54 391.39 226.27 166.79 276.82 272.97 239.07 291.29 486.85 491.9 249.63 325.54 217.92 243.13 336.41 310.78 257.51 295.78 422.59 359.01 800.15 846.71