XLOC_037489 (gene) - C. hemisphaerica

Overview
NameXLOC_037489
Unique NameXLOC_037489
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_329:572732..578042-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037489 ID=XLOC_037489|Name=XLOC_037489|organism=Clytia hemisphaerica|type=gene|length=5311bp|location=Sequence derived from alignment at scaffold_329:572732..578042- (Clytia hemisphaerica)
TAGAAAATATGGAAGAGAATAATTTAAAACACAAAATCATGGATAATTTT GCATCTTTGAGCAGGCATCCTGGTTCATCACCCTGCCCAAAACGTTTACC TCCAAAGGTTAAATTTCTATCTAGATTCTATATTTCTTGAACAAGTCTTT TTAATTACTAAATGAAAATGTGAAAACCTCAAAAAGCTGTAAGCTTAGTT CGGGTTTTGATTGATGAATTTTTCATTGTTTGTAACTTTCTTTCACAAAC TTTGAACCTCTGATGTAAGCAAACTTGTAAACTACCTCAGATTTTTGAGT TTTTATCGGGGTGCAACAACGTCAAACATTTAACAATTGTCTGAGTTTTT TATACTGACACTCTCACAGGTGTATACTTTTATAATTCACTCCTTTTGAC ATCCACCCTAAAGCGAACTAAAACCAAACTGTTTGTCAAATTAAGGTTGA TACTATGTTTCCCAAACTACTTTCAGCCACCACCAAACTTCAAGAGAAGG AAAATAGAAGCTCCCCAAGGAATGCATGGGCAAATGGTAGATGACTTCCT CAAGAAGACGCCATTAGAAGAAGAGCGAGCAGCTGGGATGACATTACGCT TAACTCATCATCGTATCCAAGGTACTTTGGAACCCAATGTTGCAGATTTC ACTGTGAGAGAAGTGTGTCAGGAAGCTCATAATAGACCCATGAGGCACAT CCATTTCACCAATATGGAGATTGACAATCAGAAGCATCCAGAGAAACCAT GTCCTATTGTTGACCCTGGGTTAAAAGAGAGCATTGATGATTTGGCATTT GGTGCAGTTGATTATGCGAAAGAAGTGCGATTCATGAAAAATGATCCCAA ACAACGGTATTTGTATTGGAATTATTTTGAAAAGAAATTAACTAGAAAGT AACTAATTAGTTTTCATTGTGTTTCATGTTTGCGCCTGCCATTTTATACT AGCCAGAAATAACGTTATCAAAATGTCAAAACATGAGTTGTTTTTATGAA ATATTTTTTAATTTTGGTATTTAATATTACTGTATACAAACTATAGGCGT ACAAAGTTTCGCGATCAGAAACTTTCGCGATTTTCACGAATTTTGGCCTT TTTCGCAAAAGTAAATGTCTTTGAGAATTCTTAACAGGGCAATTCGCGAA AGTTTATGCTTGCGAAAAATTCTCAAAAAAAGTGGAAATCTATAAAACCT TGAAATCGTAATAAATATCAAAATTTCCGCATTATCCTTTAATGCCTGTT TAAAGTCGAAGAGCAACCATTTTTATCAGATTTAAGGAATATTTTTCATT TTTAAGGCAATCTTCATTCGAAAATCCTCATTTTTATCCAACGATTCGCG AAAGTTTATGCTCGCGAAAAACATTTTTTAATCAAATTTGCGAAAGTAAA TGTCGTGAATTTCGTGATTTTTCGTCCTCGCGAAAGTTTCTGATCGCGAA AGTTTGTACGCCAAAAGTATTTGTAACAAGTTTCTTTCACAATAGAGCTC TACACTGAAAAAGACGAAACTGGCAACACTTGGATGGTCGCTAAACATAA AACTTCAGAAGACACGATTAAAGAGCAAATAAAACAAGTATCAAAGCTAT ACTGTCACTTTGTGATATTCAGACAGAATGTTGACCCTTATGACATTGTA ACTACACTCTGTCGAAAATTGCATTTTCAAAGACATGATTTTTCTTTACC CACAAAATTGAATTATCAAAATTCAACCATGGTACAGAAAGTCTCCGTTA GATTCAAACCAAGCGATTCTAGAGACCGCTTACTGCAATTGAACAATGAA GTACAAAATTTTAAAATTGGGAATTGTATTTTGAAAAAACATGGTAGATC TGGTTCTTTAATTGGGAATCATTTTGAAGTAGTTATTCGCAATGTTTCCA ACCCTTATGACTATTTTATAGAGGAAGTGTCTGAACATTGGGCTAAGACT GGTTTTATAAACTATTTTGGATTTGATTACTATGGCAGTGGCAAGGTAAA TCTAGGTATAGTATGTGTCATTTTTCATTTTTTTCGTGATTTTAATTTAA AAATTGTTTTATTTCCACCATTTGGTAGAAAGCTAGGAAAAAGGGAGCTT TCAGGTCGCCCTCCAGCGCCCTCAAATGCAGTCTCATACTTACTTAGTTG ACAGTCATTGAAATAGTTTAAATAGATTGAAAAAGCAGCTGTTTTTAAAT TCCTTTTTGTTTTACTTTCAGGAAAATTCATGCTACACTGTGCTGATACT ACTCTGCAAATGAAGCTTCCGAATAGAGAAAGACAATTCCATTTGAAAGC TTATCAAGCGGTCACTTGGAATAAATTTGCTTCCTATAGAATCAAAGTAA AGTGTTGTCTTTGAAATATTTTTTATAATAGTTTACTTTGGATGAATGTA GTATTCTTAAAAATCAACCTAAATTTAGAATTTTTTTTGGACAAATTTCT TTCATTTTCCTACAGCTAGGGATTTTTCAAATTTTTCTTGCAGGTTCAAA TTTTCGCGGTTTTGCCAAAAAAACACAAAAAACGCTAAAATTGATTCTCG CAAAAATTAGTTCCAATAAGTAAGTTTTTCCACGTTTTCTCATGGCTTTT GTTGATTCTAATCAGTTTTAAATGATTCGAATCAGTCACAGAGCTAATAA CTTAGAACATTTCATTTTTACACTTCTTGGTCTTCTTTTCAGCAATATGG ATTACAGCCAATCATTGGTGATTTGGTTTTAACAAAAGGAAAAGGTATAA CCTAACAATATTTATCTTATTTTTGCCATAAGCTTTCCCTTTTTTATCCT GGCAATATAAATAACATTAATCTAGTTTGTGGACGTTTGACTGCTTGAAT ACAAAGGAAGTTACTTTAATTAGATAAGAAGGATACAAGTGCTTATGTAA AACCTGGNGACGTTTGACTGCTTGAATACAAAGGAAGTTTTACTTTAATT TTTTTTTTTACTTTTAATTATTTTAACGTAAAACTTTGAGGATTAACAAT ATTTGAAAACTTCTCATCCACAGACAGTACTGGAATATCAATCGTCAAAT CCATAACTGCTGAGGATATCAACCAAAAACAATACACTGTTGAACAAGTA GTTTTACCTTATCCTGGACACGGGTTGAAGTACCCTGAAAATTTGTGCTT GAATTACATGTCAAACATCTTGCAACAGGATGGGATAGAATTGATCAATA TCCCACGGCGTAGAGGTGACATGAGTTTGATATGTGGGTATAGGTAAGTA TTTCTTCTGACTTTTGAACTGATCCATTTTCACCAAAAAAAACTCAGGCC TTTGAAAAAAAACTTTCATCTGCAAAAAAGAAATTTCACTTGCCAAGCTA ATGAGTTTTCAATCTTTGAAAGCCAACCTAGCCTTCATTTAGTTTTCAAT TTGCCTTGTAAATGAAGTTTTTTTATCTTTTTTGAAAGTAATTGGCTTCA TCTTTCTGATTATATTTATTTCTTTTTCAGACCCATCATTTCAAAGCCTC AAAATGTAGAATGGGATCTGGTTTCATACGATGATCCAACTCTTCCATTA ATAGAAAACGATTATGAACATCTTTTCCGATTAGCTGCTCACAATTTTAA ATATAGACAGATGAAAATTAAATATGAGGAAGCCGTACGCAAGAAGACTT TAAATGGTGCAAGTGAGGCCATGTCGAAACCAGATAATGAAGAGTCTGGT ACTAGTGGTCTCGAATGCAAAGAAACTGAAGAGAGTGATGAAGACTTAGC CAAAGGTATTGATGTTGACGAGCTTTACCAAGGAATTGGTTTAGAATCTG AAGAACAACCTTCATCATCTGATGGTTTACCAGAAAAACCACCTTCGTTC GAGTTTAGACCTCAACTTGGAGTTGAAAATGGACTGTACAAAGCTCTTAG ATTGAGATTTATGTTAAGCCAGGAGGCATTTGGTACTTCAGCTTTGAGAG AGATTATGAGTACTTGCCCACCTTATGATCCTGTCAACGTTTCGCAACCG CCCATACAAAGTTGTACTGCTCAAACATCGCTGCAGAATCCTATTGCTCC CCTGTTGCAAGTGTCTACGGCTCAGCCATTGCCTGAAAATCCTCAACCAC CATTGCAAAACTATACTGCTCCACCATTGCTGATAAATCCTACTTCAACA ACACCTCTGCGGAATCCTACCGCTCCACTAATAGTAAAAAATGCTGTCAC TCAACCGATGCAACAAAGTCTTACTGTTCTACCACTACTGCAAAATCCCA CTGCTAAACCACTTTTAATTAATCCTGCTGCTCAACCACTGGTGCGGCCA TTAGTGCGGATTCTTACTGCTCCGCCAGTCCTTCCCACCCCAAGACTGCT ACATAATCCTACTGTTCAACTGGTTCAACCACTACAGAAAAGCCATAATA TTCTACCACTACAGCAAATTCCTACCCCTCCACCAAATCTACTAAACCCT ATCCAGATTCTTGTCGCTCAACCACCTCCGCAAAACGCTCCTGCTCCAAC ACTGCTGCTAAATCCTACAGCTCAACCAACTCTACCGAACCCTATCGCTC CACCACCATTGAGAAACCATATCGCTCCACCATCGCTGCTGAACCCTACC CCTCCACCATCCCTGCAGAATACTACCCCTTTACCTCCGCTGCAGAGTTC TACAATTCAACCACTGATGGACATTTCTACAACTCAACCACCTCTGCGGA ATCCTACCTCTCAACCATCTCTGCGGAATTTTAACAGGCCAACATTGTCA CAAAATCCTAACAGGCCACTATTTCTACGTAATCCTATCAGACCACCTCT TCTTACAAATCCTAATGGGCCACCATTACTACCAAACCCTAATGGGCCAC CATTACTACCAAACCCTAATGGGCCACCATTACTACCAAACCCTAATGGG CCACCATTGCTACCAAATCCTAATAGGCCACCATTGCTACTAAATCCTAA TGGGCCAGCACTACTACCAAATCCTAATGGGCCACCACTACTACCAATTC CTAATGGACCACCACTACTACCAATTCCTAATGGACCACCACTACTACCA AATCCTAACGGGCCACCACTGCTACCTAATCCTAATGGACCTCAACCGCA AAATCTTCCTATTCCTGATGAAAGAATATATCTTCAGGATAGGTTTAGTG ATGAACTAGTAGCACCTATAGGTTTTAGTCAACCATCATCAAACCCGCCT TCATTAATGGAAATCGAAATAAAAGATCATTTTTACAAATAATACTTCTG TTGTTATAAAGCCTCTTAATTATCTTGGTTGAAAAATCAACCTGTAAATA TGTAAACTGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059602TCONS_00059602Clytia hemisphaericatranscript
TCONS_00059601TCONS_00059601Clytia hemisphaericatranscript
TCONS_00059600TCONS_00059600Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059600-proteinTCONS_00059600-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:572732..578042 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PRAM1PREDICTED: PML-RARA-regulated adapter molecule 1 isoform X3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.88 7.94 8.69 8.73 10.97 8.68 7.42 7.22 4.23 5.21 4.22 2.64 3.78 3.71 2.97 3.57 4.48 4.62 1.99 2.04 3.24 2.87 5.8 4.63 4.05 4.78 2.38 2.34 5.08 5.49