XLOC_037395 (gene) - C. hemisphaerica

Overview
NameXLOC_037395
Unique NameXLOC_037395
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_327:170046..181355+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037395 ID=XLOC_037395|Name=XLOC_037395|organism=Clytia hemisphaerica|type=gene|length=11310bp|location=Sequence derived from alignment at scaffold_327:170046..181355+ (Clytia hemisphaerica)
TTCAGTCTGAACagatataaaaatgaaaacaaaaaagtacaACACAATCG ACCAGTTTGTTGCAAAACAAAGGGAGCTACTAAAATTAGAACAAAGCGAG GAAGTGTGCCAAAGGCAACAAATTTATGAGAATAAATCTATCAAAGAACT TGTGAAGCGAGGAGTTTGTGTTAACCGGCTAAGAGTGGATCATCACAGAA CTGGACTATTTGGAAAACACGTTATAGTTTTCAACTTGAACACCAGTGAT TTACATTCCCATAAATTATCATCTGGTAATTATTATTGTTGACTCTTATT ATGTCCACTAGCAGAATAGAAAATGTTttgacaaaaagaatatttaaatt catgACTTTACTTAAGTGAAGATACTTGGTTATGAAAAATGATANttgga atgtttacaaggctcttgacagaaaatcgtttgttttattgtcaatgatg acagtgtcgttattaattttgttagatctgacatattgatgtttgtacat acactttatagttttgatttccattgaagaatcatattctggttttcatg ttattattaaatgctgttttagagctttagagctagcttGTCTAAAACAG catcaataacatgaaaaccagaatatgattcttcaatggaaaTCAAAGCT ATAAATTATTTCTTATTGAGAATGCTCCTTGAAAAATGTAGGagtcaaat ttttgtttcagatCAGCCTAATATCAACACACCTCATCTAATAGTCATTT GGGAGAACACAAcggtctattgaataactaattactccagcagcattttt ttcaatgataatgtcaCCTTATTGATTTGTCCTTTTATAACACAGTTGTT ACAACAAGGACAAGATTATCCCGTTTGTATGtactggctgagggaaagta atgcaTATGAAATTATTTGTTATTTACTAAGCCGTTGTTGCAGTCGTTGC ATTTTCCTAAACGACCTATTCCTATTATATTAACCTATTCCTATTATATT AACCTATTCCAACACTCTTCTTTAGAGTTGGAAAATAAGGAATAGGAATC ACTGATGGAAACTATATTTCTTTACTTAGCATAGAGAGCAAAAACTTTAG TGATTATCACCTTCCTTTCATTCTAACTCTTGCATTGATCTCTTTAATTT TCAGTCTGAACagatataaaaatgaaaacaaaaaagtacaACACAATCGA CCAGTTTGTTGCAAAACAAAGGGAGCTACTAAAATTAGAACAAAGCGAGG AAGTGTGCCAAAGGCAACAAATTTATGAGAATAAATCTATCAAAGAACTT GTGAAGCGAGGAGTTTGTGTTAACCGGCTAAAAGTGGATCATCACAGAAC TGGACTATTTGGAAAACACGTTATAGTTTTCAACTTGAACACCAGTGATT TACATTCCCATAAATTATCATCTGGTAATTATTATTGTTGACTCTTATTA TGTCCACTAGCAGAATAGAAAATGTTttgacaaaaagaatatttaaattc atgACTTTACTTAAGTGAAGATACTTGGTTATGAAAAATgatagattttt ttaatttttcaatgcCTTGTTACAATGGTAAGTAAATTAAGAAACTTTGT GTTTTTTAATGTAGGTGAACTAACATTAGATTTCCTTTCTTTTGCTGCTT CATTTAGGTAATTTCAGACTTAGATTTACAATCAAATCTTACTGCCTtct tttttcactcaaaaattagcttctttttttctatttaggAGATATAGTTG GTTTATATCCAAACAAAGGTGACAATGGTGACCTTATTGCATCTGGCTTG GTTGCTTCATCGAGACCTCCAAACATAAGTGTTGCTTTCAATGAAGCCTT TGACTTGTTAGCAACATCACTTTATCGGTTGATGAAGCTTACAAATGATG TCACATACAGAAGGCTTAACAGGTATGTCATGAGCGAGTAGTGATCTTTT GCATTTTTTAGAGACATGAATTATTAATAAGGTCTAGACAAGCCATCTAA TTGATTGACATTTGAGATGCTTTCAGGTAAGATTtaagaaaagagaaaga gatCTTTATCTTTGGAAGTCCAAATAATTTTGGTTTGAAGGTTGGTTGAG GCAAAGCAAATCAACATATTTTTAAGGCCAGCCCTAATGAACCAGAACCT TGTATGATATTACTGACATTTTTGTTGCAATGAATGGCAATGGCCATACC CAAAGAAGTGctttgaaataaataaacattttatgcaaaaagtagggaaa attaaatttaatgaGACTTAATTCTGGAGCTTATATGTTGAATGTTCCAA GTAGTAGAATGGCAAGTaagcaaagttttttttctttcttcagtgCTATC AATAACATGGAAAAGTCAAACAAAGAAACAAATCCATTCTTCGCTGCACT TTTTCCTTGCAAGACAGTTGAAGATAGTTATATTAATCCCACTGTAAAGA TTACCCAACATTTCAACCAAAATCTTGATCAATCACAAAAAGATGCTGTG TATTTTGCAGTATCCACCTCTCTACCGTTATCAGTTATCCATGGCCCTCC TGGAACCGGAAAAACAACAACGGTGGTGGAGATCATTCAACAGCTCatcc aaaaatttcataaaaaggtAATAAAAAAAACTCCTCCTTTTGTTCATTGA AATCTCCAGGATATCTAAGTTCTTTAcacatgaaaattttaaggaaGGTC TacatttctatttctttttatttaggaGCAATTTAGCAATAATTacataa tttataaaaatacatgCTAGATTAAATTTTTAGAAGTAATTCCTTGTAtt caaaattatgattttcatttttagattttagtctGTGCTCCATCCAATAT TGCAGTTGACAATTTGGTTGAGAGATtggcaaaattaaaaacaaaggtTT GCTTTTTTGATCTTGTGTCATGGACAGCTGGATTGAAAAATTGATAACTC AAATAGACTGAAGTGTCATATATATTTTATAACAATTTCCTTCGTTCTTT TGTCGAACTAATTCTTCATAATTgcaagaaaaatatataatatatgtggT ATTACTTCAAATTTCAATTAGATGCCCTGGGTGTTTATAAATACCCCTCC TTAAAATTGTTCAcctttttggggggggggtatttaaaagaagggggtgt ttattcAAGGTTAATCAGCTTTATACCCTTGCATTAAATTCTGCTTTTGT CATTGAACATTACAAAGATTTTGATAAACTGATTATGCCCAAAGTCatct aaaaacataattttctttGTAAAGACAAATAAAGAGAACTTTTCTAATAG CATACATTGAAAATTCTCAATACATTTTGCGCGCAGTAGCACTTTGACCC ACGTATTAATTGATGTATATCACAGCTGTGAGTAGCAGACACTAATCTTT ACAAATATACAATAGACAAGATAGGGCGTAAAAATTCAAGATAAGATTTC AATAGACAAGATAGATGGACTTCTGCAACacaagcaaaaaactttatgcC TCTTTTATGAGCtataatcaaaaatcaatttaaacACAGGTTGTTCGTCT TGGTCACCCTGCAAGGATCATTGAAGATGTGCAGCGATATTCACTTGATG CTATCATTGATTCTCATGATTCcagtgacgtcatcagagagttGAAAGCT GAAATAACAACAAAATGTGTatgttttattcaaaaaacacaTTTAGATAT TAGATATTCAATATATGCAACACTGCATTGGCTTCAGACGCAAAATTATG CATCCTTTTTTGTTTTACCTAGTCATTATTTGACGTAATGGCAGAATAAA TGATGAATGTGTTTAGCCTGGGAATGTAAAAAAACCTTGGAGAGGGCTAG TCGATTTAATCATCCATTTCACAAGTTCTTGGAGTATCAGAATTAGTATT ATTTTACCAGGAGGGAAACTTTATTACAATTACTCAAAATTATATGTATA AATAATAGtaatattttcactttgtcAGGCTGCAAAAAGTAAAGGTGGCA GCAAGCAAAAATGGGATGAAGTGAAGGTTTTACGTAAAGACTTGGCGCAC AGAGagcaaaatttgatgaaaagtattCTTGTTGATGCTGATGTCATATT ATCAACAACAACCAGTGCTTCCAAAGAAGGTAAGAAATTGCAGATAAATT AATTAAGCTTGGTCATTTTGAAAACATATGTGTTCTAATGTTTACTATTT AcatgaaatctatttttgtaAACTAATGATGAAAGAATTTCGTTTTATGG CTTTAACTCTAGTTAATTTGAGACCAAAACTTTGTCCAGACCAAGTAGAC TTGCGTAGATCATACTATGTTGTGGATTTCCTGGCAGGataacaaatttt tttatggttttttaGGTCCATTAAAATTATTGGAGGATGATCATTTTGAC TTACTGATCATTGATGAAGCTGCACAGGCAATGGAAATAAGTTGTTGGAT ACCAATGCTTAAAGTAAAGAGGTATTAAAGAACTCAATATGTTTCTCTCA TGAATACAGCTATTAGTCTTCAGTgatcaaagttcttccgtctcagacgg atttccgtctcacagaaatttttgtcaaagttttccgtCTTAGTTAGAAA TGGTTATTTAGCAAGAAATAGTGATTTTATGCTCTAGAAACATTCTAAGT TGttttaattaacaaattttagtgCCTTTCTAGCCAATCTAGGGGGTAAA AAATCCGAAAATTTTCTTGATCTCGGCCCCAACAATGGTGGGGCCTGCGG GTGTCACAGTATACGGAAATAtctttatcaagaaattttccgtctcacaa aaaaaactgcttttttTCACTAGCCCCCAGACactatcctccacccccat gtacgatcattttttggaagagcccaatcacAGATGGAAATTGACTCACA TAGATAACATTAACATGAGCATAAAGTAGAAAAACAATACACATAATACT TGACTCTAATTTGAAACTAATTGAAATTAAATCCAAGTtcttacaaaatg aaaattctatTTGCAAGTGTATCGAttgtattttgtattttattctaACT ATATTCTGTTGATACtatgaaaaacttaaaatttttcacCTCTTAAAACC TCTTaaatctttcgtttttaacaGATGTATATTGGCTGGGGATCATTTAC AATTGCCACCAACTATTATCAGTGAAAAAGCGGCAAGAGAGGGCTTGGAA GTCACCCTGCTAGAGCGAGTTGTACATGGGCTTGGTCAAAATGCTGTACA AATGTTAACAACACAATATAGGTTTAAATTGTCCAACTCTCATTTTTAAC CTTTGTAGTTtacagtgttaaaagttcttcctgTGCAGACAGATTTCTGT CTCAGTGAAGCATATAAAGAGATGCTTTTCTGTCTCATAATCATCcacta aaatttcaagaatatgtgctaaatgctgtgtaaaatccattttctgtCTT AGATGAAAAGCCTTGCTTCGACCACTGATTAGTTAGTAGGTTGTTTTGCA TTTTTTCCTGAATAATTTTTGTCTAAACTTAATGACTTTGTTACTTTCAT AGAATGAATGATTTGGTCATGCGCTGGCCATCAGAAGAATTGTATGAAAA CAAACTTGTAGCTGCAGACATGGTTGCAAATCACTTGTTATGTGATCTAG AAGGTGTTACCAAAACTGAAAATACTTCAAACCCATTGGTTTTTGTTGAC ACTGCAGGTAAAATCTTGATAAATGTTGTTGGCATTTTATGGCGTAACTA ACAAAAGATCCTATTTATTAGAAATAACTGTCAGAAATTTCTACAAACTT TTAAACAACTGCTAAACTCTAACAAATAGTTTGGTAGTTTTGTTGTGAGT GGCTGATTAATGTCGCAGCATTATCTAactaaatgtttttgaattagaga aagattcgaattttgagtaatttaaaaCCACTCCAACTATAAGGGAAcaa tattttagtttgtattgtagaaagattcgaataatagaggttcgaattag agagagagttgactgtagttTGGTAGTTTTGGCGTTTGTCATGCACCATT ATCTAACTAATATTTTTTATCTCCTTAAGGTTGTAACATGTACGAACTGG AGGATCAAGAGGAAGATTCAAAAGGGAACACATGGGAAGTGGACATTGTC TATGAACATATAGTACAATTGGTTGAGGATGGAGTCAATATGCGACAGAT TGGTGTCATCACGCCCTATAATCTACaagtattttcttattttttataaa aattatccATCTACAAAGGCACTAAACTTAAATTTATTCTTCTTTAAATT TCCAAGCCTAactaaattttgccaaaaatgcaTGGTCTTTTGTaagctgc acacatcccctctaaAATGTTTTGATAATAAAGGGTATGCTCATTGTGTA TAAACTTCTTGTCTGAGAATTACCCCAAATTCAGCATtccctatatcaaa tcatatcagagggaaTGTGTGCAGCCTAggtatttttggacctaccccgg tggaggtcctataaattaacctttgtccgtccgtccgtccgtccgttagt taccagcttttctcgagattagctcattagttttttctgattttttgcac aatgatgcaaaatggcaatgcccaaaatgtgacggagcccgattttcgga aaaaaaaatttttgcccaaatttgagccaaaaaacggctaaaaaacgggt tttttggactttgtgaaaaattggatcattaattttttctgattttttgt atgaaagtagagtaccatcataggtaaaagatgtctcaagcagatttttg caaaaaaattttgctggctcaaaaaacgcatgtttatctataagaatcac tattaataagcatacatcaatgttcttagtcaaattactcattttgttta tgagatagatgtttttattgctcacgagggcttacttttgaagaatatgt ctgtttagacaggaaattttgactgcttagcgtgtttttatagaaaaact ggccaaattcgatatttttttataagcacattatcaattacttaggtatt agcttttctcgaggtTGCCGCTTTCaatgtttatgattttttgcacaaag atgcataactataaaccctcgaatgtgacggagcccgatttttgaaaaaa gaattttttgggcaaatttgggccaaaaaacggctaaaaaacgggttttt tggactttgcgaaaaattggatcattatttttttctgattttttgtatga aagtaggtaaaagatggctcaagcagatttttgtaaaaaacgaatttttc agctcaaataacgcacgtttatctataagaatcactattaataagcatac atcaatgttcttactcaaattactcaattttttttatgagatagatgttt ttttttgcttgcttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgctctcaactttggca agctatttttttcaagtcataaaaaaaattattggagtgacaaaggggat tcaaaagtataacCGCAGtttaaattctgcatttcaaagttgaaaaagtt gataaaatatgtTACAAACTTGTaaagaaattcgaaaataacttttttgt gcattaggagtaatgttcaagctctatcaatctttttacctaaataattc aaagaaataaaattatagtggaatattgtcggatttttcataccaatttt ggaaaacaggcggcaacgaagctcgcttcaaagagacaataaaagataga tgtccagtcgtttatatgttcatgcttgaatatgaaagaatatttaaaga gcatgaaattttggtttctaaacggttttttataagaaacaaacaactaa ttttaatagatcgtcactatttgtgttctgaatgattgtttaatggtcac gctcacttagatatcaattatatatgtgttaaatgcaaatccaggtaggt ccataaaagtatcacttgttggacttggtgcaaaattgcttcattagttt ttcctgatttttggcagaaagatagtctagcaagctagacgactaattca tacatagtagaaataaagcaaaaagtaatgaagggaacaattttagtcgt ctagaaacctttgtgcactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNagtttgttgttgcttgataaatttttttctcg ctacgcaagtttctgcgtagctagcccctgtatctataaagctggaacac cggattcttccagtcgtttatacagactaaatcccgtattattatcatta gtattggtattattagtattacacgcattataaacgactccagtctagca gaaagatagagtgcaaggtaccctaaaatgtggctgaagtaatttttctc ggaaaattttttttcgtcgttaaatacggattttcgttttttggggaaat tcccttttaccattttcctgttagcagcttttctcgggattggctcatta gttttttttaattttttgcacaatgatacaaaatagcaatgcctaaaaag tgacggagcccgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNtgaaaaaaaattttggggggcaaatttg ggccaaaaactacctaaaaataaggttttttggactttgtgcaaaattgc ttcattagttttttctgattttttggacaaagatgaagggcaaggttctc taaaaagtggctgaagcagtttttttcgggaaattttttttggccgtaaa aatcggattttcttatttgggaaattcccttttgtcatatttagggaaaa tgagcatttctcgagattggcgtggtatttttttcttattttttgtatag tggtaatttgggtagaaaagtgcctaatgtttgttttttttagatttttt cgacTAATTTGAGctctgatactcacggtaatctattcaagctgctcact acactttcttattcccttgctatttgtcctatttttttctgattttgatc gacaggtaggtccattcagcatgttgcttgttccagaaaaaaacttatGA TACCCAAAAGCTCTTTCACCAACCTCTGATATTCTACAAAAAAGGATATT CTGGTATTGCATACCTTTGGGGGAAGTTTTCCTTTTGTAGTACACACTTT TTGTAAGAGACAGTAGATTTAAGGCCAGCCTCTGCTGTtctaatgttctt aaattttctacATTTGTTTTTGATAGATTGTGCTATTTCACTATTTCATT CCCGAAAGCCTTTAGAATTACCCTAAATTTGATATCTCGGTAATCTTAAT TCATTAATTTATTTTCTTAGCTTGTGGCTAAATTTAAACCTTTTGGCCTT ATtatgattgttcttataaaatatcttcaaaagtNAATTTAATTTCTCAG ATTTTGGCTAAatttaaaccttttgttcttataaaagtatTGTAAGCGTG TATGATATCTTTAGTCATTGTTCATTGTTTCAGGTGGATATGATCCGAAA AAAGGTGCAACCAAAATATCCATCGATTGAAGTCAATTCTGTGGATGGAT TTCAGGGACGTGAAAAAGAAGCCATCTTGATTTCACTGGTCCGGTCAAAC CAAGAAGGTACAATCACTGACAAAGTGTCAGTTTTTCCACTAGCCTTTGT AAACCCTGGACTAAGCTAGCTATATCAGTTATGTTTAATCGGAGTTTTTC CGAAAGTGATAACCGCAAAGAAGCAATTGTAGTGTTAAAACTTTACCCAA Taagccatttcacagtcgaaatggatcatgggtaatcaggactgattgta CCTCCATAACGGCTTCCCATTGGCTAGGCGCAAAATtcttcaacattttt caaaaccaaTAGTAAAAAGTCGTCATTAGTGCGCAGTGNGGCTAGGCGCA AAATtcttcaacatttttcaaaaccaaTAGTAAAAAGTTGTCATTAGTGC GCAgtagtcctgattacccattacgcttttcgactgtgaaatggcctata caAAACAGTGCTACATCACAAACAGTCAtagaaaagtagatctagcttCA CCCATATTGGGAACTAGTACCCTTTAGGGTACCAGTTTCTCAAAAACTCG GaccaaagattttgcttggtgAGGATTGAGAAATGGCCTCCAGGGTTTAA ATAAATCTCTTTTTGTCACAAAATGAAAAGATAAAACCCAAGATGtcgaa gcaaaataatgcggcACCTAAACAAAAAAACTCGGTGCCGGCAAAGTTCA TCCTTTTCTTCTCTAAGTGAGAAACGAAGTagacaaaatgaattttttat ctTACATTTATATTAAGACAATTTGAGTAacccttaaaaataaagatgaa aatattttcttcttttttctcgtAGGCAAAGTTGGTTTCCTCAAAGAGGA CCGACGTATTAACGTAGCTATAACGCGAGCACGTCGTCATTTATTCGTGG TTGGAGACACGTCAACCATTTCACGTCATCCGTTCCTTGAGTCGTTCTCT AATTTCATGTTTGAGAAGGCTGTGGTGAGGTCCCCACTTGTAGACCAACA AGATATAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059404TCONS_00059404Clytia hemisphaericatranscript
TCONS_00059405TCONS_00059405Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059404-proteinTCONS_00059404-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:170046..181355 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
IGHMBP2DNA-binding protein SMUBP-2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2 0.22 0.6 0.38 2.25 1.56 0.6 0.74 0.31 0.4 0.25 0.11 0.18 0.27 0.19 0.19 0.41 0.24 0.09 0.27 0.16 0.17 0.19 0.13 0.5 0.78 0.14 0.24 0.05 0.23