XLOC_037241 (gene) - C. hemisphaerica

Overview


Name	XLOC_037241
Unique Name	XLOC_037241
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_318:269908..279145+

gene from alignment at scaffold_318:269908..279145+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_037241 ID=XLOC_037241|Name=XLOC_037241|organism=Clytia hemisphaerica|type=gene|length=9238bp|location=Sequence derived from alignment at scaffold_318:269908..279145+ (Clytia hemisphaerica)
aaaaatttaaagGGTTGTTTTTCTCCATCGTAGATCTCCCATTAAAATAG
AAGCCGGAGCAAAATTTCTGAAACCAAGATGGCGGACTCAGATAGCGATG
GAAGAAGTTCTGACCTCGAAGATTCTATGCAAGATGAAGGCTCTTCATCG
CAGAAAAATCCCTATTCTCCTAGATATGTTAATATCAAAAAGGGTCCAAG
GGGTTTTGGTTTCAATGTGAGAGGTCAAGTTGCTGAGGGAGGGCAGTTAC
GCTCTATAAATGGAGTGCTTTATCCACCTCTTCAAATGATTAGTGCAGTT
TTGGAAAAAGGTCCTGCTGATGTGGCTGGTGTGCGTGTTGGTGATCGGAT
CCTAATGGTGTAAGAACAATTATTACTTCTATCATTAGTTTTTATTTATA
GAATTTAGGTTTTTTCAGCAGGAATAGTCTTTTAAAGGTTGCACTACTTG
TATATACTATGCTATTTTGATAGATCTCTTTTCTTTTATTCACCTTTCCA
CaggttgggtgtttaagataaaaacagcAATTATTTCTCTTTTGACAACT
ATTGCCGAAAACAGCAATTCTTTCAACAATAACaccagttaggaacattt
ggcgagttcctgtacgcaaccgcgatctaaaaaatcataaaagcaCTCAT
CTGCACTCATTAAATAATGACGTttgtgtcttttcgcactttttttagcc
tagacgatgtagcaaacatagtaaatataagcacactgtgcttttaattg
gctgaaatttctttttgcgtcgaaaaaactttttcaaactttcagctatg
attgaccaaactgttacaatgaaaattatccagcgcattttttatcttct
tatcttcttaatcttcaatgaagaactcaaagtttactgaatttaagcac
ataagatattcttataattattgatattcactgaaacaccgtTCGTTGTG
TGCTGCGGTgtggagtgtatgacgtaactcgcgcggtaaataacagttac
atcaatatgccaaaaacattttgttcaaccaccttcacttcNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNagatattttactaactagcccagagaaaaaatttaaacctttat
tatttgaatgcatgcctttttaatactcaaatataaaaaaattaaaaaat
tttaacttgcttattagtcaaaaaagtcattaaaattgattagcctctgc
gatggagtgcaagggctgaaagccacatgaatatggttcatcctataaaa
ggaagttcattctatggtggcctatcttgaagtgaaggtggttgaacaaa
atgtNggaaaatagtaagaaacttaagtttacaagtgtcatttagttttt
tctggcttatagaatggcaggatcctggatggtttccctaactgaacaCG
CTGAAtcagtaccgtcaactgctctatcttgggacaattggtcgaAACAA
CATGGgagggactgttgatatctggcctgtacagtattttcacttattgt
taaatctctttgacaacaaatttgttttcataactctaccaagtttatca
atcatactttctgtcataacatgtcacgataacttttactgatagtgcgc
cctttttaacttttttgttttcattcaaaacgaccggacgccgattggag
aattagagaaaaTCGGAAAACTGGGCTGAAATTTCAGATTTCACTTGGAA
AATTTTGTCTCACGCAAAATGAACATCTTGAGTTAGCAGGTCTGTAAAAG
GTAGATCAGGAGGtttaaagattttgatgaaaGTTTGTACTATCTCCATG
TAACTTTCTAAAAACCAAGATtccatagacctttttgcctttccatctgc
catcttgaattgtatgcaaaaatagaggaacgaaaaagccgtggttggat
ttagttggaaagtatgcaaaacatatNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNtaaaaagacaacaaagcatcttataaataa
atattataatcattagaacaataaaagatggaatttctcaatccaaaaag
aaatattcacagaacaacaataagccttttagaaatttgttcttaaagac
atagcatattctgttttcatgctattaagaaattccactaagacggagta
cacatcaaactttcaaaacacacaaactgaaaagcagtaattatgacgtc
acacattatcaatgttttgatttgatcatttggcggctctattcccagga
gaataatttaccgtcagccgaataagggttattttttaccttcgctgatg
atttttcagtttgaatttatgtctaatgttattgatttttgaagtgcttg
ttctaagagatgaacgaatataattatttttagttttcaagagaagcaaa
tttaatctttcttctacaagattacactttaatataatgccaattatgca
tgtaagttttatattaatacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNtgcatactttctaagggaatttcaccacggcaa
ttcggccaccataatttttgcatacaattcaatatggcggatggaaaggc
gaaaaggtctattgtcttATAGGACTCATTTTGTGTTTAATCTTGtgcaa
aaattgttgttttgagcatcattgtcaagatttttaggaattttagaGTT
AAGAAGGATTTTGAGCTAGGCCTAATTTTTAAAGGAGTGGAAAAGGTGTC
AAATTTCTGATAAATTATAATTGCACTATCTATAGGAAAAGtacaaaatc
aagaatcaagtaTCAATGGATGCTcattttcgacaaaaatttcagccaaa
aatgtactttaataagtcaattttacaaaattatggGGTCAGGGGAGTTA
GAAGCCACCTTTGAGTGAAATTTCAGCCTCCTTAAGTCAGGGCATGAAAT
AACAGTCGGACATcagacattgtccgacccaatcGATGAATGTCCAACTA
AAATAGATTCTGATCGGACACAATATCCAACCACAGCCAACCCATGTTTT
CAGTCActtaaaaattcaaacaaattcaAACATTATTTACATAAATTTAA
ATTGGCAACCTTCTCATTTACACAGAGAAACTCTCTGCAGTTAAAATTGT
TCTCTATTCANTGAAATTAGCAACCTTCTCATTTACACAGAGAAACTCTC
TGCAGTTAAAAATGTTCTCTATTCGTTGTGTTTGAAAGCAAACAATTCAT
CCTTTTTCAAGCTTGCTTCAAGTCAAAATCATAGTGCAAAAAATGCCCTT
CACTAAAGTCTTTCTAAATTTCTACTTAGCTTgtctaatatttttaaaac
cACCAATCATCAATGTTTGGACCAAAAGAATCTTTTGCTAATTTTTGTCC
GAACTTGACAGTCAGCTTTCTTTTCGTATATATAAAATTTACAGGAAACc
tatatttggattttgaatttACAAAAACTGCAAATTGAATTAACAATTTT
GACCACCCAACTTAGAACCTGGTACTAAGTTATCTTTTACCTGCCAATTT
TAAACACACATCTGGCAGTGGTCCCTCACCATGATTAAGTAAGTTTCCTT
TATCCAAATTCTACTAATATTATTGTTGGATCCATCTATAAACACCCTCT
TTTTTCGCTTGATGAATTCAATAAACTTCTTGAACcacttttgaataaaa
tcaacaaagaaaataaacaaattcttTTGCTAGGGtgatttcaacattaa
tcttttgaatatttcttCTGATCCCAATATCTTTTCTTACTTGAACAACC
TTGGATCACACTTTCTTATACCTAATATTTTTCTTCCGACTCGAATTACT
GACCACTCCATGACACttattgacaatattttttcttcaatttctgaaAA
GCGTACCTTTTCAGGAAATTTGCTTTATTCTATCTCTGATCATCTTCCTC
AATTTCATATGTGGTCCCTCTGTTAAaccaaagaatgaaaaaatcttCCG
AAAGGACTGGAAAAACTTTAAAcaacaagattttatttttggttttcTTA
ATATTGATTGGGTAAATAAATTATATCATATAACAGATGTTGATCAAGCT
TTCAAAACCTTTTATGATCTTATCCTAGACCTTATTGATCAACATGTCCC
GACTGTTGTTGTGACCAAACGCCAACAAAAAACTCGGGCTAAACCATGGA
TCACCCCCCCGGAATTATTAAATCAATCTCACAACGTCAATTTTATTcta
gaaaatatattcaaaccaATGGCCCTATTATGAAATCTTTTTACtatcaa
agaaataaaacatCAATCTCATAGTTACTCTTACACGTAAGAGTAAGAAT
AATTATTATTCCAATTTTTTCTCTGTTCATGCTACAAATATTCTGAAAGT
CTGGGAAGGGATCAGAGATATCATAGGATCTGATTCCAAATCTTCTCCTT
CATCTATTCGTGTCAATGGTCATCTCAGCTCTGATCCAAACGTTGTTGCC
AATGGCTTCAATGACTTTTTTACTTCTATTGCAGATACTGTCCGTTTCAA
AATTGGTCCAACCAATCGTCACTTCTCTCACTATCTTAAAAATCGCGNTG
GTCATCTCAGCTCTGATCCAAACGTTGTTGCCAATGGCTTCAATGACTTT
TTTACTTCTATTGCAGATACTGTCCGTTTCAAAATTGGTCCAACAAATCG
TCACTTCTCTCGCTATCTCAAAAATCGCATTAGGAACTCTATTTTTCTTG
ATCGTGTTAACCCTGCTGAAGTTTTACTAACAATTAATTCTTTATACTTT
AACAAATCATCTGGCCCTTATAGCATTCCCCCAAAAATTCTTCGTCTTCT
AAAGTTTGACCTCTCTGGAcccctttcttttctttttaacctttcattTG
AATCTGGTTGTTTCCCCACAATGCTTAAACTCTCGAAAGTTATTcccgtt
ttcaaaaacaaaggctcCCCACTTGAAATATCCAATTATCGCCCTATATC
TCTTCTTTCCAACATAGAGAAAATTCTTGAGAAACTTATGTACTCTCGTC
TTATTACTTTCTTAGATTCTCATCGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNatggtaaataaataaatacttacttacttgcAACCAACTGCAGAC
TATTGTTCCCTTGACAAGCTTGATAGAAATGTTAAATTCTCTGTAGACTA
TTTTAAGATGGAATGCACTTGAATTTTCTCAAGATAGACTATCCATAACT
AATCTaacatatttttttgattttgaaatccaGAATAGACAATTAACTTG
ATATTCAGAGTTTCTTGTGTGCTTTTCTGCAAAATGATCAGCTGGCAATA
ATTTTTATACTTTAAAATTCTTTATAGGAATGATCAAAATTGTGAAGGAG
CAGACCATCGCACAGTTGTTGATCTCATACGACAAGGTGAAAATGAATTA
TCAATGGCAATCATTTCAGTTACTCCAAGTGAAGCTCGTAAATTGGACGG
TCCTACAAATATGTTTGGTGCATCTGACTACATAGATTACAGTGATCGTA
GAAGTATTCCAATTTCAATTCCTGACTATAAACATGAAGAAAAGGGATCT
GATAAGTTTGTGGTAAGCTCTATTCATTTGATAGGCNTGGTGCATCTGAC
TACATAGATTACAGTGATCGTAGAAGTATTCCAATTTCAATTCCTGACTA
TAAACATGAAGAAAAGGGATCTGATAAGTTTGTGGTAAGCTCTATTCTTT
TGATAGGCTTATTTTACTTATTTGCCAGATCGGAACTCAGGATTCTTAAG
CTTTAAGAAATAGACTGATGCAATAAAGGTTCCTATTTGAAGAAacaaac
tttctttaaaaagagtgataatttttttggattgGCTGGTTTTGAGGTAG
GCTCGGTCAAATGATGGCAAACCAATGAAGTCCAGCCTTATCACATAGCT
GGGCATTAATGTTGTATTTTTAAAGTATCTTTTGTAAATTGGGATTTAGG
AATGTATCTTGTATCTTGTTCATCACTAATatgagtttgaattttttttt
ttcaggtttatAACATATACATATCTGGCAACTTGGTGACCTCAAAACGT
TATAATGAATTTCACAGTCTAAACAATGAGGTGAATTAATTTGTGAAAAG
AGTAAGATTAAAGAGTAACATACTTTAGGCGGCCAACTtctcgccctgcc
tattctaattgggAGTCAGCAGAGaattggctgtctaaagtcgccctctt
ttgacgtcaatgccatgtcttctttcaacctttttaAAGTAACGATTTTA
ACTGCCAAATAGAGCTTCGATacctaatcgcacgatgggttattttttct
tatttggcacgccctcaaagagagcaattaatcgttaattgcatcctgta
gagagcaattaatcgttaatcacactcttcaatgatgcgccaatgtttac
aaaaattattttaatgttttttcttacatctttttttgcatcgaacgttt
ttaattgcattcgaaattcattttgtgagaaagaaaatcaataaacaaca
ataaaagaaagacacagagagaagagaaaaatataaaactctcagtgtat
ttctgtaatttactttcctaaactgggaaaaagtagtggaaaccattgtg
cgattagcttgtaatcacataataacacgtgcaattcgaatataattgca
ctcgtgatttctttgtttcgaattttcctcgttctttcggactcggaaaa
ttaataacaaaaaaaatcactcgtgcaattatattcgaattgcactcgtt
atcatgtgattacatatacaaatcagttttcaatcttttttaccaatgca
gtttttggacctacctggaggtcttttaatttgaccgttgtccgttcgtc
tgttacaagcttttctcaggatcggctcgttagttttttttaattttttg
cactcTGGTGCAAAGTGGTGATTCCCAAAAtttgacggagcccgattttc
gaaaaaaaaaatttttgggcaaattggtccaaaaagtgcctaaaaatggg
gtttttggactttgtgtgaaattgcttcattagttttttctgattttttg
cacactggtgtaaaatggtaatgcccaaaattttgcggagcccgattttc
gaaaaaaaaaatttttgggcaaattggtccaaaaagtgcctaaaaatggg
ggttttggactttgtgtgaaattgcttcattagttttttctgcttttttg
gacaaagatgaagggcaaggttctctaaaacgtgactgaagtagtttttt
tcagaaaattttttttggccgtaaaaatcagattttcttatttggggaaa
ttcctttttgtcatatttagggaaaaagagcatttctcgcgattggattg
atatttttttctgaatttttgtatagtgatataaaatggtaatatgtAAT
GGTAATTTGGGCAGAAAAGTgcctaatgtttttttttttttacttttttg
actaatttgagccctgatactcacggtaatttATTTAagctgctcactac
actttcttattcccttgctatttgtcctatttttatctgattttgatcaa
caggtagttccattcagcatgttgcttgttttactTGAATTCTATGTTCA
ATGCTTTGTTCAACTTTGTGTTACAGTAAATTTCATAGAAGTGAAATGTA
TTTTCTCCCAATTTTAGTTAAAAAGACAGTTTCACGACTTtccatttcca
aaatttcctgGTAAATGGCCTTTGAAACTTTCTGAAGTACAGTTGGATGC
TCGTAGAAGACACTTAGAGACGTATCTTGAAGAAGGTA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00059128	TCONS_00059128	Clytia hemisphaerica	transcript
TCONS_00059129	TCONS_00059129	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00059128-protein	TCONS_00059128-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_318	supercontig	scaffold_318:269908..279145 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.47	25.9	16.66	16.91	32.86	28.76	39.65	45.49	30.82	37.92	29.82	27.82	37.48	45	31.93	32.41	34.66	31.39	33.62	40.08	39.73	42.94	27.59	30.81	31.67	34	28.97	22.34	31.31	29.83

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XLOC_037241 (gene) - C. hemisphaerica