XLOC_036053 (gene) - C. hemisphaerica

Overview
NameXLOC_036053
Unique NameXLOC_036053
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_286:25195..34467-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036053 ID=XLOC_036053|Name=XLOC_036053|organism=Clytia hemisphaerica|type=gene|length=9273bp|location=Sequence derived from alignment at scaffold_286:25195..34467- (Clytia hemisphaerica)
CCCTGACCCTACCTAACTGTTAGTTAATCAATTCCAAACAACAAAACCCC CGGAAAATTTAAAATGTCGGAATGAGCAATAGACAGCCTTCTTTTGAGAC CTTGTAATTATCCTTTTCCGGCGAAGAGTCGTCAGTCGAAAGAGCCATAT CTGTTTCAATTTTTTTTTCAAAACATCAAAGATGGCTGCATTAAGACAAG GTGTTAGAAGGATGACAACCTTAGCTGGTCAAGCCTTGAAAGATGCAGTT GCTGCGGAAGAAAAACATGCCAGAGGTAGTAATTTTTTGATAAACTATCA TTCACTCATTCATTATTTTTTGACACCCATAGATATAAATGGCAAGACAA GATAACCAATAGCACAAGGCTCGAAATAACGATTTCAAGTGGGTCGGACA AAATGTCCGATCAGGGTTGCTTTTGCTTGAAAATTATGATTTTTGGGTCG GACATAAAGCCATTTGGGTCGGACAATGACAATGTCCGATGTCCGACCGT TATTTCGAGCCCTGGATTAGAGCAGCAGTTGGGTGTTTAGGATAAAATGT AAAAAGGGTGATCCTTTCAGCGATGACATGCTGAAAGTCAGTGACCACCT ATTGCTATCGATTTTATTGGTGATCAAATACTTGACTCCAGGCAGTCAGG GCCAGTGCCAGTCAGGGCCTCCTTTCACACAGGTGTTACGCGTAAGCCAA ATCGCGTATTACGAACAACCTCTAAATTGCAGAGTACAAGAGAAAAAAAT GGAAATTCAAAATGGCGGCCAAGCCCACGCTGATAACTATCAAAAATCTT TGTTTTTCAATCAGCTATTTTGGTTATGTAGGTTTTAAAATCCACCACAA GTAATGAACCTCTTATAGCTTTATCTGAATAAATCTGGTTGAAAACCTTC TGTCAGGTTTCATTCCGTACGTTTTTTATCCACGCGGTGAACCGGTTTCC CTGATTTCCTGATAATTAAAAATTGGAACTTTCCTGTGGGCGTACCGCCA TCGCGAAATATTTTTCGTGAAAATTTACCGTATTCTAACGCTGATATAAT CTAGATAGGAAACAAATATTAAATTTGATTCTTTTTTTGTTCGTATTTCT AAATTTCAAGATAAAAAGAACTATGTCATCTGGGGTAATAACGGGACACT TAAAATGACGGGGTAAAAACGGGACACCCAAAATAAAGAACAAAGAGTTT AAAAGGATGAACTCAAATTTATGCCCCTTAAAAGATCATTTATAAGGCTG TAAAAAAAATCCATACTTTGATCAGCTTCATTCCTCTACATCAGAATACA CCACGATGTTTCTTGGTGGTTGAAAACGTTGATTTTTCCTAGAACGCTTT TTTCTCGACTTAGAATAAACGCCGTACTAAATGCAGGCGCTACATGTTTG GGTCATCGAGACTAGTAAACAACCCTATTTTGACCTGCCCAAAGTCGCAA GTTTGTACAGGGCCCCGTTTTTGAAAAAAAGGTGTCCCGTATTTACCCCG TGAAAATTTTTCTATGTTGGGGTAATAACGGGACGCGTCCCGTATTTACC CCAGTCTATATTTGGCGCGCTGGGGTAATCACGGGACGCCGTTTCACGCA AGTCTAAGTTTAGTTCATGTCCCGTTTTTACCCCACTAGGCAGAAAACAA CGAGGGGTAAATACGGGACGCGTCCCGTTTTTACCCCGGGGGTGTCCCGT TTTTACCCCAAAATCCGGGGTAATTACATTACGTGAATATTTTGCGAAAA ACTAAAAGTCATAAGTTTACACCATTAAGAGGGTTGATAGATGACCATTA GAGGGAGTTGCTGGCCAAAAATCATGATTGTAGCTTTTGAAGTTCCTGAG ATATGGAAAGGTTCGTCGACTTCGTCCCGTTTTTACCCCAGATGACTATA TCTATGAATTATTTTCTTTAACAGGCGTTGAATCAACATTGACATGTTAA TGATGTCATAATCAATGCCGTGCATATTTTGTCAGTTTCATTGGATAAAT ACCACTAAAATATACAAGATAAGTAAACATAAATTTATCGCCCGCGAGCA CGGTTTAGCTAAGCGCATCTCTCTTATTCATTATCTAAGAATTGGAACGG GCAAAGATTACCGCGCGGGCTGATAGCGGACAAAGNACCGCACGGGCTGA TAGCGGACAAAGGTTTTTTGAAGATATTTTCAGTTATAATCCAAGGTAGA ACAAACTAAACATAGAAAGGGGGTATTTTTTAGTGCTCTACAGTATACGA TGATCGGTATTTTTTTTGAATTCTATGTTTAGATTTTTCTACCCAGCCCT GTTGCTATGTACGCGCGTCCTGTTGCTAAGACCTTTGCTTGAAATTGAAA GCGAAACCAAAATAATTTAGCGCACACTGCCGTTTGTGTAATATCGATAA AATGAAATGAGGTCCTGACTGCCGTACATAACAACGGGGCTGGGTAAAAA ATCTAAACAAAGAATTAAAAAAAAGAAAAGGCTAATCATATAGAGCACTA AAAAATACCCCCTTTCTAGTTTGTTCTACCTCAAATTATAACTGAAAATA TCTTCAAAAAACCCTTGTCCGCTATCAGCCCGCGCGGTACCGTGGAGTCG TCTAATATCTACATCTTCTAATTTCGACACCGGATCCGGATCTGTAAAAT AATCAAAACAAACCTTCAATGAAATTCTTGGTATCATTCTTATCGAACAA GTTCATCCATCAAACTAGAAGTTCAGTATTGCAATCCTTTCAATTAAAAA AGCAGCCAAATTATAAGCAGTTTCACACAACACACGAAACGCATGCAATC TTCCTCGTAATTTTCTCGTGCCCATCATTAAAATTTTACAACTTTATTAC GCTTCAAGTCACGTGATAAAAATAATTCGCGCACTTAGTCGACCTGGTTT CCCCATCCTTATTGTTTATTGCAAGCACGTGCTCTAGGCGCTAAAAGGCC GCATTAAACTTCTAGGCGCTGTTTTATTTCGAAGACCAGCCTACAGCTAT GTCGAAATTAGAAGATGTATGTTGATATTAGACGATCCTACAGTAATCTT TGCCCACTTCAATTCTTAGATAATGAATAAGAGAGGTGTGCTTAGCTAAG CCGTGCTCACGGGCGATAGATTTATGTTTACTTATCTTGTATATTTTAGT CGTATTTATCCAATGAAAAGGATATTGACAAAATAAGCATGGCACTGACA AAATATGCACGGCATTGATTATGACATCATTTTAATATGTCAATATCGAT TCAACCGTTAAAGAAAATAATTAATGAATAGTTCTTTGGCGAGGGGAATT TGATTCTGTTTACTGTTGACCGCCCTGCATGCTCTTAGGCCGCCGCTCAA AAAAGTTCATTATTTCTTAAAAACTCATTATTTTCTTCTTTTTCTGTGCC AAGCTATCCAAAACACTCAAAGTGAATAAAAAATAACATCTTCGCTAATG CGCCTCGAGTAAAAAACATGGTTCCAATCACGTCCGCGAATGGGGCAGGC ATTCCTTTAAAGCAGTGGGCTACAAGGGCGTTTTAGAAATTTCCGTTTTG GACGCGTTTCAAACGCGCATGTCATTTTGATTCCGAAAGTGAAAGCAGCT CGACTGGAGATGGGAAACACCAGGTAGGAATAATAAATAATGAGATTTTG CCGCATCAAATATTTTTTGCAACGCAACGGTAAACAGAACATCAAATTCC CCTCGCCTTTTATCGTGAAATTTAGAAATATACAAACAAAAAAATAATCA AATTTAATGTTTCCGATCTAGATTTATTAGCGTTAGAATACGGTAAATTT TCACAATCGCGCCCATGGGAAAGTTCCAATTTTTAATTATTGGATAATCG GGGAAACCGGTTCACCACGTGGATAAAAAACGTACGGAATGAAACCTGAC AGAAGATTTCTTTCTTTCTTTGTGAGAAAAATTAGGGGTCATTTATTAAA ATTGGTTAAGTATTTCCAAAGAGTCGTCTGCCTACCCCACCTCAACAAGT AGAAAAATTTTTCAAAAGCACTAAAAATTGCGGATGAAATCTAGCCTTCC GCGTGACGTGGCGTGCAGAGCTTTGCTGGCAAGGCACGATCTGAAAATCG GTCCGATGACTGTTAAACTTTGGTTTATTGCTAATGAGCTGGAAATGATA GTTAAAAACAAATTTTAGCACTAGAAAGCTGAAAAATTTGCAATCTTAGT CGAAAAATCACAATTTCTTCTATTTTTCGAAATTCCCGATGGCCTTTAGA TTTTCAAATAAGGGAGAAGACACCCACCTAAATCTGTGACCAACAGATTG GCTATTTCCCAGAAATTTTGCCAGACTCCATCACTGATTATTATTATTAA AATGAATATTACAGGTTGTAGGCACTCAGTGGGCCTCTAAACCGATCTCA ATTAACAAATTTTGTGTATCGAATTTCTTTGGACGGCTTTTTCATGCTTC TTTCAACTTTTCTTTGAAGCCTTTTATGTAAACAGCAGCTACCACCTCAG ACGGCAATTTATTCCACGTAGGAATGGTTCTGCAGGCTTTTCCAGGAAGA AATAAGTAGGAGAGCGACGAATCACTCACGTAACAAAGAGAAGGCCTGTT TCACTCGCAAACTTTTTACGAAATCGCGCACGTAAACCAATTTTAGCATG CGCGATTTAACAAAACTTCCTTAGATATTTTTCTATAGAATCAAAGTATA ATTGAGATTGACAAGCATTTTACTAAGTGCGAGCGCGATTGCGCACGTCT TATTGAAAAGCATGTTCTGTTCTAGAACGACTTTGTTTGCAGGTCGCTGA ATCAATCACCAGAAATGGTCTAAAGACTGGTTGCTTCAGTCCATCCAGAC AAGTGCCATGTACTTACAATCGGAAAGTTTACAAACATAAAATATGCGCA TCCATATACCTGGAATCACTATAATAAGCATACATCAATGTTCTTAGCCA AATTTTCTAGAAAAGTGCTAGCAAGAGATATTTCGGGTCCCATATCTTCC AAAGGACTTTTCCGTTTACCTTGAAATTTGACAACCTTCTTAATCTAAGG TTGAACTACCAATGGTGTAAAAATGAACCTTGTAGCATAAGTAGAAAAAA AGCTCAATTTTTGCAATCGCAAATTTAACCGCTAAAAATTGCGAATTTTT CAATCNACAGTATCTCCAAAGTTTTACAATTGGCTCTTCACCTGGAAATT GAGTATGATAAATATATATGTAGCGTATAAAAAATATGATGTTCATTAAA AATACTCAGACTGGTTGTAACTAGAGACTAGAAGGCTAAAAGTAGATTTG AATAATAGATTTGATCAACTCGTTGAGTTTATCGTTGTTTTCTTCATCCA TTTACATTTGCAGAATTGTTTTTACTTTAGTGTTGATCAATTTTTTAAGA ATGGGGCAGTTTGGGGCAGGTCCAATAGTATGAAACTTAGATTTTTTTTA ATTTTTGGATATGTTAAGTACAATGAACTGAGTAAAATCCCAAAATATTT TGGTCTGAACATCCATAATCGGATTTATGCCAATTTGAAGTTTTTGACAT TTTTGGGCATTGCATTACTGTCCCCATGGAACCTTCATATAATATCAATG ATACCAATAATGCCAATGCATCAACACTTTTAATTGCACTGTTCAAAAAA GATAAACCCCTGTTTTTACTAAAAATTTGGAGATTGGATGTTTTCTAGAA AAGTGCTAGCAAGGGATATTTCGGGTCCCATATCTTCCAAAGGACTTTTC CGTTTACCTTGAAATTTGGCAACCTTCTTAACCTAAGGTTGAACTACCAA TGGTGTAAAAATGAACCTTGTAGCATAAGTAGAAATAAAGCTCAATTTTT GCAATCGCAAATTTAACCGCTAAAAATTGCGAATTTTTCAATCAAAAATA CATTCAAATATGGCGCTTTTGATTCTCTGAAACAAGCAAAGAATTTTTGA AATTATATCAAACTATCAAAAGTCACAGGCATTCTTTTTTCCACTGCCAA TTATATCTGGATACACTTTAGTTTGAATTTAGTTATAGCGTTTTTTGTCT CCGCTGCAAATTATTTTGAGACAGACTTTAGAGCACATTCAAGATTGGCC AGGTCCGGTTCAGACCGGTCAAGTCCGGTTTGGAACGGCCAATAATGGCC AGGTCCGTTTTGTCAACAAAAACGATGGTGTTTGGCCAATGAAAGACTGG TTCAGACCGATATGGACCGGTCCAGGCCGATCCAACCGGTCCAGAACGTT TTACGGAAGCCGAAATACAAATTATAAGCACTTGACTCGCTTGCTCTTAT GAATCCATTTAAAAAGATAGTTAGAATCCTCCTCAGAATAGAATTGCACC GGTTCCCTTCGTTAGTTTATTTAGACATTTTAGACATCCCTGTACCATTT ACATATCTTCCCTGTTAAAACTTACCTGTCAATATTTTTCTTCGTATTTC ATACACAGCTAGTCAAGTAACACCAAAACCAAAAGGAATACCAATTGTTT CGGCCTTTTACTAACGACTGTACAATCTCTCAAAAAGGAACAGTTACTTG CCTCTTCCTTTGTTGATAATCCAATAATATTACAGTAATCTTGACACTTA TAATCTTTATCTTTCAGCTCAAGGTTTATCTTCAAGCTCGTGAAGGTTTT TACTCTAGTGAAAACATAAAAATGAAAATACTTCTTCCTTCTTGCTTTTG TTATGGTTCTTTTCAGTTTGCTTTTGTTTTGGTTTTAGAGTCAGAAACTT TTCAAAACATTCGAAATTCTTTTTTTATAATTTGATCAAACAATTCTCTG GAGCTCATTCGAACGTTCTCTGGAGCTCATTCGAACTTTTTACAAAAAGA TTCGAAAGTTTTTGGGCACTCGAAATTGTAAACAAAAAAATACCTTCATA CAAAAAGAGTTGCTTGTTTGTTTTCAGACCGGACTTGGCTGAATTGGGTC GATTTCGACCGGTCTAGATCGGCCTTTGTTTAGAGAAAAGATTTTAAAAA ATATGGCTCGGATAAGATCGTCCTGGATTGGCCAAGATCGGTCAATATCG ACCAAATTTGGCCAGGAACGGTCCAGACCGTTCCATATCGGCCAAAAATT CGGCTTTTTATTAAGGATCGGCCCATTTTCAATGTGCTCCAAATCGCTAG CAGGGACACAGTTGTTCTTAAAATTTAGGTAATTTATCATGGTTTTTGGT CCTTTCAGGGACATCAAATTTATTGGAAAAAAAGGTCTGATTCGATAATT AAACACCTTTATTCTATTTCTCCAGCCACATCGATGCAATGGAAGAAAAT CTCTTTATTTATTGCCCTACCTGGTATTGGATTATGTGCCTACAATGCCA TCATAGATGAACTGGAACACATGAAGCACGCCCACCCTGAATTTGTTGGC TTCGAACATTTGAGAATCAGAAAAACTGTAAGTACTCTTCCTTGCTCCTT GTCTTTGATTCATTATAATTTTGTATAACAATCCCAGGTTTAAAAAACGT GTTAGTACCCAGTAGTACCCTTAATGAACACATGAAACTCGAACTCACTC TATCAATTTAGCTAACAGTTTCAAAGACACACATAAAAATAAAATTGACT GCTTACGTAATTGATTATGAAAAACCATAAAAGATAGTAGCCCTCCTTTA CAGAAGGTAGATGGGTAAAGAAAATTCGTTAACTCAATAAAACTTTGGGA ACAAAACTTCTCTCTCAACAAACTTATTTTCCTGCAAGTTTCAGGGTTCT TTCCATAAAGAAAAATAGTTCCCGGCGAAATTTTAAACACCACAAATGAT TTTTAAGCGTTAAGTTGGAAAGTGGAGTTTTAACTCTGAGTTTTCACATG AGACTTAAGACTTAGCACCTTAGGATCTCAGGATTTAAAAGGTCAAATTT GCTCGAATAAGGCTTGGAATATAGCCTAGAAGCCATCAAACCCCTCTAAA ATCGAAATCTTCAATGAAAGAAAGTGGAAGTGCTAAAAAAGCAATTCTCG CCCGAACTTTAAATTCTGAAAAATGTTAAAATACACTAAAATCTCAATAC AATATATTTCAACCATGATTGTAGACCCATATTTTCAAGGCTAAAAATAT TGAATAATTTTCACAAATTACAAAGTTGAACATCTTTTTAACGTGATCTA CCCTCTGAGACATTACATTGTGTTTTTCTGTAACACGGGACGGTAAGGTT CTTCATTCTGACTGACTGACTGTGTACGTGGTATGGGGGAATTTGTTCGT TTTTTTGAGGCCGCTCAATTTTTTTAGTCAAAGCACTTGTTATACATTTT TGGAAAGCTAAGGGGTAGGGGAATCAAAATAACATGGGTGCCAATTTTTT TTCGGACACTTTGGTGTTTTTTTCGGACAAATATGACGATCTCAGGCAAA AAATAAGGTCAAAATTTAATGAAAACTTTAGCTTGAGAAAATAGAGACAT GTTGTATATTTTTTGAAAACTCTCAAAAAGTTAAGATTAGAGATATATCG CGAGTATAGATGATTTCTCTACCTAACTTGAGACATTAAGCTTCAAAAAG TGCAAAAAGTGGACAAACTAGCTGTTTCTGGCTGAAAAAACACTATTTTT AAGGGTCAATATCAGTGCTTTGACAAAAAAAAATCGAGCGATTTTACAAA TTTGCCCCTACTGGTAAATCAACATTTTTATCGTTTTCGATTTACGGATC AGAACTGCGGTTTATTCCAATTTAATTCAGTCACTTTACCGTCCTCAAAA GTGCAAATACATAAACTCGCTAATTATCAAAAGGGAGGGATTTTTTAATG AGAAAACGGCAAAATCTAAATTGGTGGGTTACAGACCCGTCTGGACGAAT CCATATAATATAACCATGCCAACACAAGAACAGTCTCTTAAAAGAATCAA GAATATTAATCTATTTGTTCTTCTTTTTCTTTTTTTTAGTCTTTCCCATG GGGCGACGGTAATCACTCACTTTTCCACGGACACAACAATCCTTTACCCG AAGGTTATGAACACTGAACAAANAGTCTTTCCCATGGGGCGATGGTAATC ACTCACTTTTCCACGGACACAACAATCCTTTACCCGAAGGTTATGAACAC TGAACAAATTATTTTATTGTCTACATCCTGAATTTTTTTGTGACATAAAT GTAAATTTTAATTGTTGGAATTATTTTGATAATTTCATAATTTTTTAAAC ATAATATCCATCATTGAGTTGATTGGAGATGAATTTTCTACATTATTTTT TTGTCAATCCTGTCCAATTTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057230TCONS_00057230Clytia hemisphaericatranscript
TCONS_00057229TCONS_00057229Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057229-proteinTCONS_00057229-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:25195..34467 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
COX6A2cytochrome c oxidase subunit 6A2, mitochondrial precursor Homo Sapiens
COX6A1cytochrome c oxidase subunit 6A1, mitochondrial Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
327.53 334.03 433.33 482.57 427.14 329.15 466.46 506.07 423.6 404.94 386.04 410.82 301.9 319.79 307.26 285.54 444.72 438.87 252.49 228.09 403.66 400.45 289.68 276.56 516.64 477.46 397.02 374.58 243.18 235.06